Definition | Clostridium botulinum A str. ATCC 3502, complete genome. |
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Accession | NC_009495 |
Length | 3,886,916 |
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The map label for this gene is fbpB [H]
Identifier: 148379141
GI number: 148379141
Start: 1267332
End: 1269020
Strand: Direct
Name: fbpB [H]
Synonym: CBO1154
Alternate gene names: 148379141
Gene position: 1267332-1269020 (Clockwise)
Preceding gene: 148379140
Following gene: 148379142
Centisome position: 32.61
GC content: 25.81
Gene sequence:
>1689_bases ATGAACAGGAAAAAATTAAGGGTATCTAATAAATTAGATACCCAATTTTATAATATTTTAGATAAGATTCTAATAGTATT TATAATATTATTAGTACTTTTATTTATATTTTGGCCAATTATTTGTGTTATAAAAGAAAGCTTTTTAAAAGATGGCAATT TTACATTAAACCTATATAAAGATATATTTAAAAATAATGAGAAACTTATATATAATAGTCTGTTTGTATCTTGCATGTGT ACAATATTTACTACTTTAATATCTATATCAATAGCTTTTTATGCAAGTTTTTCATCAAGTAGAATAAGAAAAATAATAAC AGTTACTTTAATGCTTACAATGATATCACCACCCTTTGTGTCCTCACTAGCGTACATAAATTTATTTGGAAGAAGAGGCT TTATAACTCACGAGATTTTAAAGCTAACTTTTAATACATATGGTTGGCAGGGGATTGTTATAATGGAAACCTTAGGTTTA ATATCTATGTCCTCACTATTATTAATAGGTATAATAGGGGGAATAGATAAAAATTTTATAGATGCTTCTTTAGATTTAGG AGGAGGGTTTAATTATACTTTAATAAGAATAGTTTTACCAATTATAAAACCAGGTATAATAGTTTCTGCATTATTAGCTT TTGTGAGAAGTTTATCAGATTTTGGAACACCAATGATTATAGGAGGTTCTTTTCAAGTCTTAGCTACAGAAGTTTATATG AATATAATAGCTAATGGAAATTTTGGTATGGCTGCAGCAATGAGTGTACTTATACTAATACCTTCGTTAATAGCTTTTTT AATATATAGATTCTATATGAGTAAATTTGAAATTTTTTCTAAAGACAGTAAAAAGCTTTTCTTAGAAGGGTATGAATACA AAATAAAAGGAGTTTCTGCTATTATTTTAAAAGTAATTACGTATTTGTTTTTATTAATAATGATTATGCAATATATATCA ATATTTTTAAGCGCTATAACCAAATATAAATTCAATAAAATGTTTTTTACTTTAGATAATATAAGAAGGATTTATAATTA TAATTTAAGTAGCTTTGGAAGAAGTATAGTATATTCATTAATTACTGGATTAATAGGTAGTTTATTAGGAATCTTGATAT CTTATTATGTAGATAGAAGGAAAGTTATAGGTGGAGAACTCATAGATTTTATATCTACGCTACCTTATATAATTCCTGGA ACATTTTTAGGGATAGGATATATATTTGCATTTAACAAATATCCTTTGGAATTTACAGGAACATCTTTTATAGTAATTAC AAATTGTATATTTAAGCAAATCCCTATGACCACTAAGATGTCTTCGGCAGTTTTATCTGGCGTAGATTTACAAACAGAAG AAGCAGCAAAAGATCTAGGAGCACCTAATATATTTATAATTAAAGATATAATATTACCTATGTTAAAGCCAGCTTTCTTG GTTGGATTTATAAATAACTTTACATCTACTATGACAACTATAGGAGCGATAATATTTTTAATATATCCAGGTCAAAAGGT AGCTACAGTGGAAATGTTTGATGCTATACAAAGTGGAGAATATGGTGTAGGTTCTGCTATGGCATCATTAATAATTATAA CTACACTTATTATAAATATATTGTTTACAAAGCTTATTATAGGAGGAAATTATGTATCTAAAGATAAACAATTTGGTCAA AGTTTTTAA
Upstream 100 bases:
>100_bases GTGCCAAAGGATAAATTGATGAAAGAAGATTTATCTTCCTTTGGGAAGGATAGAAAAGAAATACTTGACAAATGGAAAGA TATAGCAGGTAATAAGTAAT
Downstream 100 bases:
>100_bases TAATATAAAAGTGGTTGATAATATTAATTTAGAATTAGAAAAAGGCAAGTTATTATGTCTTTTAGGACCAAGTGGTTGTG GTAAAACTACTACTCTTAAA
Product: ABC transporter permease
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 562; Mature: 562
Protein sequence:
>562_residues MNRKKLRVSNKLDTQFYNILDKILIVFIILLVLLFIFWPIICVIKESFLKDGNFTLNLYKDIFKNNEKLIYNSLFVSCMC TIFTTLISISIAFYASFSSSRIRKIITVTLMLTMISPPFVSSLAYINLFGRRGFITHEILKLTFNTYGWQGIVIMETLGL ISMSSLLLIGIIGGIDKNFIDASLDLGGGFNYTLIRIVLPIIKPGIIVSALLAFVRSLSDFGTPMIIGGSFQVLATEVYM NIIANGNFGMAAAMSVLILIPSLIAFLIYRFYMSKFEIFSKDSKKLFLEGYEYKIKGVSAIILKVITYLFLLIMIMQYIS IFLSAITKYKFNKMFFTLDNIRRIYNYNLSSFGRSIVYSLITGLIGSLLGILISYYVDRRKVIGGELIDFISTLPYIIPG TFLGIGYIFAFNKYPLEFTGTSFIVITNCIFKQIPMTTKMSSAVLSGVDLQTEEAAKDLGAPNIFIIKDIILPMLKPAFL VGFINNFTSTMTTIGAIIFLIYPGQKVATVEMFDAIQSGEYGVGSAMASLIIITTLIINILFTKLIIGGNYVSKDKQFGQ SF
Sequences:
>Translated_562_residues MNRKKLRVSNKLDTQFYNILDKILIVFIILLVLLFIFWPIICVIKESFLKDGNFTLNLYKDIFKNNEKLIYNSLFVSCMC TIFTTLISISIAFYASFSSSRIRKIITVTLMLTMISPPFVSSLAYINLFGRRGFITHEILKLTFNTYGWQGIVIMETLGL ISMSSLLLIGIIGGIDKNFIDASLDLGGGFNYTLIRIVLPIIKPGIIVSALLAFVRSLSDFGTPMIIGGSFQVLATEVYM NIIANGNFGMAAAMSVLILIPSLIAFLIYRFYMSKFEIFSKDSKKLFLEGYEYKIKGVSAIILKVITYLFLLIMIMQYIS IFLSAITKYKFNKMFFTLDNIRRIYNYNLSSFGRSIVYSLITGLIGSLLGILISYYVDRRKVIGGELIDFISTLPYIIPG TFLGIGYIFAFNKYPLEFTGTSFIVITNCIFKQIPMTTKMSSAVLSGVDLQTEEAAKDLGAPNIFIIKDIILPMLKPAFL VGFINNFTSTMTTIGAIIFLIYPGQKVATVEMFDAIQSGEYGVGSAMASLIIITTLIINILFTKLIIGGNYVSKDKQFGQ SF >Mature_562_residues MNRKKLRVSNKLDTQFYNILDKILIVFIILLVLLFIFWPIICVIKESFLKDGNFTLNLYKDIFKNNEKLIYNSLFVSCMC TIFTTLISISIAFYASFSSSRIRKIITVTLMLTMISPPFVSSLAYINLFGRRGFITHEILKLTFNTYGWQGIVIMETLGL ISMSSLLLIGIIGGIDKNFIDASLDLGGGFNYTLIRIVLPIIKPGIIVSALLAFVRSLSDFGTPMIIGGSFQVLATEVYM NIIANGNFGMAAAMSVLILIPSLIAFLIYRFYMSKFEIFSKDSKKLFLEGYEYKIKGVSAIILKVITYLFLLIMIMQYIS IFLSAITKYKFNKMFFTLDNIRRIYNYNLSSFGRSIVYSLITGLIGSLLGILISYYVDRRKVIGGELIDFISTLPYIIPG TFLGIGYIFAFNKYPLEFTGTSFIVITNCIFKQIPMTTKMSSAVLSGVDLQTEEAAKDLGAPNIFIIKDIILPMLKPAFL VGFINNFTSTMTTIGAIIFLIYPGQKVATVEMFDAIQSGEYGVGSAMASLIIITTLIINILFTKLIIGGNYVSKDKQFGQ SF
Specific function: Part of the ABC transporter complex fbpABC (TC 3.A.1.10.1) involved in Fe(3+) ions import. Probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG1178
COG function: function code P; ABC-type Fe3+ transport system, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: Non Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 ABC transmembrane type-1 domains [H]
Homologues:
Organism=Escherichia coli, GI1788764, Length=196, Percent_Identity=25, Blast_Score=69, Evalue=9e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000515 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 62989; Mature: 62989
Theoretical pI: Translated: 9.82; Mature: 9.82
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNRKKLRVSNKLDTQFYNILDKILIVFIILLVLLFIFWPIICVIKESFLKDGNFTLNLYK CCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHH DIFKNNEKLIYNSLFVSCMCTIFTTLISISIAFYASFSSSRIRKIITVTLMLTMISPPFV HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCHHH SSLAYINLFGRRGFITHEILKLTFNTYGWQGIVIMETLGLISMSSLLLIGIIGGIDKNFI HHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHH DASLDLGGGFNYTLIRIVLPIIKPGIIVSALLAFVRSLSDFGTPMIIGGSFQVLATEVYM CCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCEEECCCHHHHHHHHHH NIIANGNFGMAAAMSVLILIPSLIAFLIYRFYMSKFEIFSKDSKKLFLEGYEYKIKGVSA HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCEEEEHHHHH IILKVITYLFLLIMIMQYISIFLSAITKYKFNKMFFTLDNIRRIYNYNLSSFGRSIVYSL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEHHHHHHHHCCCHHHHHHHHHHHH ITGLIGSLLGILISYYVDRRKVIGGELIDFISTLPYIIPGTFLGIGYIFAFNKYPLEFTG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCCEEECC TSFIVITNCIFKQIPMTTKMSSAVLSGVDLQTEEAAKDLGAPNIFIIKDIILPMLKPAFL CCHHHHHHHHHHHCCCCHHHHHHHHCCCCCCHHHHHHHCCCCCEEEHHHHHHHHHHHHHH VGFINNFTSTMTTIGAIIFLIYPGQKVATVEMFDAIQSGEYGVGSAMASLIIITTLIINI HHHHHHHHHHHHHHHHHHHEEECCCCEEHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH LFTKLIIGGNYVSKDKQFGQSF HHHHHHHCCCCCCCCHHCCCCC >Mature Secondary Structure MNRKKLRVSNKLDTQFYNILDKILIVFIILLVLLFIFWPIICVIKESFLKDGNFTLNLYK CCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHH DIFKNNEKLIYNSLFVSCMCTIFTTLISISIAFYASFSSSRIRKIITVTLMLTMISPPFV HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCHHH SSLAYINLFGRRGFITHEILKLTFNTYGWQGIVIMETLGLISMSSLLLIGIIGGIDKNFI HHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHH DASLDLGGGFNYTLIRIVLPIIKPGIIVSALLAFVRSLSDFGTPMIIGGSFQVLATEVYM CCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCEEECCCHHHHHHHHHH NIIANGNFGMAAAMSVLILIPSLIAFLIYRFYMSKFEIFSKDSKKLFLEGYEYKIKGVSA HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCEEEEHHHHH IILKVITYLFLLIMIMQYISIFLSAITKYKFNKMFFTLDNIRRIYNYNLSSFGRSIVYSL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEHHHHHHHHCCCHHHHHHHHHHHH ITGLIGSLLGILISYYVDRRKVIGGELIDFISTLPYIIPGTFLGIGYIFAFNKYPLEFTG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCCEEECC TSFIVITNCIFKQIPMTTKMSSAVLSGVDLQTEEAAKDLGAPNIFIIKDIILPMLKPAFL CCHHHHHHHHHHHCCCCHHHHHHHHCCCCCCHHHHHHHCCCCCEEEHHHHHHHHHHHHHH VGFINNFTSTMTTIGAIIFLIYPGQKVATVEMFDAIQSGEYGVGSAMASLIIITTLIINI HHHHHHHHHHHHHHHHHHHEEECCCCEEHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH LFTKLIIGGNYVSKDKQFGQSF HHHHHHHCCCCCCCCHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8807793 [H]