| Definition | Clostridium botulinum A str. ATCC 3502, complete genome. |
|---|---|
| Accession | NC_009495 |
| Length | 3,886,916 |
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The map label for this gene is 148379120
Identifier: 148379120
GI number: 148379120
Start: 1248177
End: 1248677
Strand: Direct
Name: 148379120
Synonym: CBO1133
Alternate gene names: NA
Gene position: 1248177-1248677 (Clockwise)
Preceding gene: 148379119
Following gene: 148379121
Centisome position: 32.11
GC content: 28.14
Gene sequence:
>501_bases ATGTCAGTAAATTTTACATTAAATTTAGAAGAGGCTATGGAACATTTATATAAAAAAGGTGCTTTTTTAACTGGGAGTAT AGATGATAAAGTAAATACAATGACAATATCTTGGGGGAACATAGGATTTCAGTGGAGAAAACCTGTATTTATAGCTTTAG TTAGAGAAAGTAGATACACTAAAGAATTTATAGATAAAAGTAATGAATTTACAGTAACAATCCCCTTTGGTGATACCATG AAGGAAGAATTAGCCTTTTGTGGATCAAAGTCAGGAAGAGCATTTGATAAGATAAAGGAATGTAATTTTAAACTAAGAGA TGGTGATAAAGTAGATACTCCAGTTATAGAAAGTAATGGAATGCATTATGAATGTAAGGTTATTTATAAACAACCATTAG ACTTAAAAGCTATGGATAAAGAATTAGTAGATGCATTCTATAATGATGGAAATAATCATGTTTTATATTATGGCGAAATT TTAAATTGCTATAAATTATAG
Upstream 100 bases:
>100_bases AAGTATTCAATTTGACTTTTAAGTATAAATTGGTTTTATAGTAATATATAATATAAAATAGTAAGTAAAAAATATTTATA GAATTTTTAGGAGGTATTTT
Downstream 100 bases:
>100_bases TATATAAAATTAGTGATGTATTATTTTTTTAGGCTGTTGATAAACATATTTTGTCAACGGCTTTTGTATTTTTTATTTAA AAAGTTAAAAATAATTTTAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 166; Mature: 165
Protein sequence:
>166_residues MSVNFTLNLEEAMEHLYKKGAFLTGSIDDKVNTMTISWGNIGFQWRKPVFIALVRESRYTKEFIDKSNEFTVTIPFGDTM KEELAFCGSKSGRAFDKIKECNFKLRDGDKVDTPVIESNGMHYECKVIYKQPLDLKAMDKELVDAFYNDGNNHVLYYGEI LNCYKL
Sequences:
>Translated_166_residues MSVNFTLNLEEAMEHLYKKGAFLTGSIDDKVNTMTISWGNIGFQWRKPVFIALVRESRYTKEFIDKSNEFTVTIPFGDTM KEELAFCGSKSGRAFDKIKECNFKLRDGDKVDTPVIESNGMHYECKVIYKQPLDLKAMDKELVDAFYNDGNNHVLYYGEI LNCYKL >Mature_165_residues SVNFTLNLEEAMEHLYKKGAFLTGSIDDKVNTMTISWGNIGFQWRKPVFIALVRESRYTKEFIDKSNEFTVTIPFGDTMK EELAFCGSKSGRAFDKIKECNFKLRDGDKVDTPVIESNGMHYECKVIYKQPLDLKAMDKELVDAFYNDGNNHVLYYGEIL NCYKL
Specific function: Unknown
COG id: COG1853
COG function: function code R; Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19171; Mature: 19040
Theoretical pI: Translated: 5.75; Mature: 5.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 6.0 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVNFTLNLEEAMEHLYKKGAFLTGSIDDKVNTMTISWGNIGFQWRKPVFIALVRESRYT CEEEEEEEHHHHHHHHHHCCCEEECCCCCCEEEEEEEECCCCEEECCCEEEEEECCCHHH KEFIDKSNEFTVTIPFGDTMKEELAFCGSKSGRAFDKIKECNFKLRDGDKVDTPVIESNG HHHHCCCCCEEEEEECCCCHHHHHHHCCCCCCCHHHHHHHCCEEECCCCCCCCCEECCCC MHYECKVIYKQPLDLKAMDKELVDAFYNDGNNHVLYYGEILNCYKL CEEEEEEEEECCCCCHHHHHHHHHHHHCCCCCEEEEEECEEEEECC >Mature Secondary Structure SVNFTLNLEEAMEHLYKKGAFLTGSIDDKVNTMTISWGNIGFQWRKPVFIALVRESRYT EEEEEEEHHHHHHHHHHCCCEEECCCCCCEEEEEEEECCCCEEECCCEEEEEECCCHHH KEFIDKSNEFTVTIPFGDTMKEELAFCGSKSGRAFDKIKECNFKLRDGDKVDTPVIESNG HHHHCCCCCEEEEEECCCCHHHHHHHCCCCCCCHHHHHHHCCEEECCCCCCCCCEECCCC MHYECKVIYKQPLDLKAMDKELVDAFYNDGNNHVLYYGEILNCYKL CEEEEEEEEECCCCCHHHHHHHHHHHHCCCCCEEEEEECEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA