Definition | Clostridium botulinum A str. ATCC 3502, complete genome. |
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Accession | NC_009495 |
Length | 3,886,916 |
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The map label for this gene is 148379051
Identifier: 148379051
GI number: 148379051
Start: 1169560
End: 1170261
Strand: Reverse
Name: 148379051
Synonym: CBO1061
Alternate gene names: NA
Gene position: 1170261-1169560 (Counterclockwise)
Preceding gene: 148379052
Following gene: 148379045
Centisome position: 30.11
GC content: 30.77
Gene sequence:
>702_bases ATGAATATAGATATACCAATAATAAAAAACAAATCTGTACAATTAATTATAATTACTTCTATTGTCCTGATGTGCTGTAC CATTATGGGTATCGTGGATGCTATAATTAAACCCAGCTATGCTGTGAAATCTGCAATTAAAATCATTTTATTTTTAGGGT GTCCCTTGGTATATTCCCATCTGACCAAGCAGTTATCCTTAAAAAAATTGTTTTGTTTTAAAAAACAAAGCTTTTTTATG TCATTGTTCCTTGGCATGGGAGTTTTTATTGTTATAATGGGTACATATTTTTCCTTAAGAAATGTATTGGATTTGTCTGG AATTACAATTGCTCTGCAAAGTAATATAGGTGTTAGTAAAAATAACTTCGTGTTTGTCTCCTTATATATCTCCTTTGTTA ATTCGCTCCTTGAAGAATTCTTTTTTCGCGGTTTCGCTTTTTTGTCGCTGAAAAAATTTACTTCACGATCTTTGGCATAC AGTATCAGTTCCATAGCTTTTGCCTTATATCACATTGCAATGATGCTTGGATGGTTCTCTATAGTTACTTTTGTGTTGGT AATGATGGGACTAGTAGTAGGTGGAATTATATTTAACTTTTTAAATGAGAAAAATGAGGATATATACTCCTCCTGGATGG TACATATGTTTGCTAACTTTGCAATTAATGTAATAGGATTTATTTTATTTGGAATATTTTGA
Upstream 100 bases:
>100_bases TAAAAAAAGCAGCTGAAACAAAGGAAGAAATGGATCTTACTTCTTAATTGGAGATATAATAAAATAGAAATTATTTATAT TTTATGGAGGATAAAATGGT
Downstream 100 bases:
>100_bases TTTATAACAACTGTAATTTGTAAGTTATTAACTAAATTAATTAATTTAAAGATTTATACTAGCTTCCCTTGGTTTAAAAA ATAGAGGTATGTGGCGTAAA
Product: CAAX amino terminal protease family protein
Products: NA
Alternate protein names: CAAX Amino Terminal Protease Family Protein
Number of amino acids: Translated: 233; Mature: 233
Protein sequence:
>233_residues MNIDIPIIKNKSVQLIIITSIVLMCCTIMGIVDAIIKPSYAVKSAIKIILFLGCPLVYSHLTKQLSLKKLFCFKKQSFFM SLFLGMGVFIVIMGTYFSLRNVLDLSGITIALQSNIGVSKNNFVFVSLYISFVNSLLEEFFFRGFAFLSLKKFTSRSLAY SISSIAFALYHIAMMLGWFSIVTFVLVMMGLVVGGIIFNFLNEKNEDIYSSWMVHMFANFAINVIGFILFGIF
Sequences:
>Translated_233_residues MNIDIPIIKNKSVQLIIITSIVLMCCTIMGIVDAIIKPSYAVKSAIKIILFLGCPLVYSHLTKQLSLKKLFCFKKQSFFM SLFLGMGVFIVIMGTYFSLRNVLDLSGITIALQSNIGVSKNNFVFVSLYISFVNSLLEEFFFRGFAFLSLKKFTSRSLAY SISSIAFALYHIAMMLGWFSIVTFVLVMMGLVVGGIIFNFLNEKNEDIYSSWMVHMFANFAINVIGFILFGIF >Mature_233_residues MNIDIPIIKNKSVQLIIITSIVLMCCTIMGIVDAIIKPSYAVKSAIKIILFLGCPLVYSHLTKQLSLKKLFCFKKQSFFM SLFLGMGVFIVIMGTYFSLRNVLDLSGITIALQSNIGVSKNNFVFVSLYISFVNSLLEEFFFRGFAFLSLKKFTSRSLAY SISSIAFALYHIAMMLGWFSIVTFVLVMMGLVVGGIIFNFLNEKNEDIYSSWMVHMFANFAINVIGFILFGIF
Specific function: Unknown
COG id: COG1266
COG function: function code R; Predicted metal-dependent membrane protease
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26256; Mature: 26256
Theoretical pI: Translated: 9.89; Mature: 9.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 5.2 %Met (Translated Protein) 6.9 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 5.2 %Met (Mature Protein) 6.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNIDIPIIKNKSVQLIIITSIVLMCCTIMGIVDAIIKPSYAVKSAIKIILFLGCPLVYSH CCCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCHHHHHH LTKQLSLKKLFCFKKQSFFMSLFLGMGVFIVIMGTYFSLRNVLDLSGITIALQSNIGVSK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCC NNFVFVSLYISFVNSLLEEFFFRGFAFLSLKKFTSRSLAYSISSIAFALYHIAMMLGWFS CCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IVTFVLVMMGLVVGGIIFNFLNEKNEDIYSSWMVHMFANFAINVIGFILFGIF HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MNIDIPIIKNKSVQLIIITSIVLMCCTIMGIVDAIIKPSYAVKSAIKIILFLGCPLVYSH CCCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCHHHHHH LTKQLSLKKLFCFKKQSFFMSLFLGMGVFIVIMGTYFSLRNVLDLSGITIALQSNIGVSK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCC NNFVFVSLYISFVNSLLEEFFFRGFAFLSLKKFTSRSLAYSISSIAFALYHIAMMLGWFS CCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IVTFVLVMMGLVVGGIIFNFLNEKNEDIYSSWMVHMFANFAINVIGFILFGIF HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA