| Definition | Clostridium botulinum A str. ATCC 3502, complete genome. |
|---|---|
| Accession | NC_009495 |
| Length | 3,886,916 |
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The map label for this gene is resE [H]
Identifier: 148379026
GI number: 148379026
Start: 1136205
End: 1137560
Strand: Direct
Name: resE [H]
Synonym: CBO1036
Alternate gene names: 148379026
Gene position: 1136205-1137560 (Clockwise)
Preceding gene: 148379025
Following gene: 148379027
Centisome position: 29.23
GC content: 27.95
Gene sequence:
>1356_bases GTGCATACAATAAGAAAAAGATTAAGTATTTTATTTGTTATTTGCTCAGTAGCAGGAATATTGCTTGTTACATTGTTTGT AAATGCAACTATAAATAATAAATTTGATGCATATATAGTGGATGTCCAAGATAAAAGATATCAAAGAATAGTATCTTACT TTGAAGAAGTATATAAAGCACAAGGAAAGTGGACTAAAAATTCTGGTGTTGAGTTGATGCATGAAGCTCATATGGGAAAT TATTGTTTAACACTTCTAGATATTAATAAAAAAACTATATGGGGTATGAACCCAAATGATATAAGATTAAATACAATGCC TGTAAAGGATAGAGGTGTTTATAATACTAAGACTTTTGAAATTAAATCAGAAGGTAAAGTAGTTGGATATGTGGGGATTG GACAGTATTCCTCTTTACTATTATCTGAAGAAGATATAAGTTTTAAAACATCTATAAATAAAAGTATTGTTGCTAGTGGA ATTCTAACTCTTGTTATTATAATTACCATAAGTCTTTACTTTTCCAAACAATTCTCAATTCCAATTAAGGAGGTTGCTAA TTTGTCTGTAAATTTATCAAAAGGAGATTTTGATGGGAAATCAAGCGTTGAAAGTAATATTGAAGAACTAGAGAATTTAA GAAAAAGTGTTAATATATTAGCTGAAAAATTAAAGCATCAAGATTCTATAAGAAGAAGATTAGTTTCTGACATATCCCAT GAGATCAGAACTCCATTAAATGTATTGCAAAATAACCTAGAGGCAATGATAGATGGAGTTTTACCTGTTACAGAAGAAAG ATTAAATTGTCTGAATGAAGAAGTAGTTAGATTTGGTAGATTATTAAATAACTTAAATGTATTAAAAGAGTTTGAATCTG AGAGTATTAAGCTTAATTTCCAAAAAATATTTTTAGATGAATTAATTGCAGATATATGTAGTGATTTTTATGCAATAGCG GAAAACAAGAATATTAAACTGCAATACCATATAGAAAATCATGAGGATTATAGTATAACTGGAGATAGAGATAGATTAAA ACAAGTATTTATAAATTTACTTTCTAATGCTCTTAAATTTACAGAAGATGGCGGAGAAGTACTAATTAAAATATATAAAA GTGATAAAAACATTGTTGTAGAAGTTAAGGATAATGGTGTAGGAATTAAGAAGGAAGATTTGCCTTTTATATTTGAGAGA CTTTATAGGGGAGATAAGAGTAGACACCAATTTAAAGGGAATGGTATAGGGTTAACTATTGTGAAAAATATATTGCAGCT CCATTATGCAAGTATAGATCTTGAAAGTGAAGAAGGTGAAGGAACTACTTTTAAGGTCTATTTTCATAGAATGTAA
Upstream 100 bases:
>100_bases TATAAAGAATATTCGTAAAAAGATAGAAGAAGATACTAAGAATCCTAAATATATTGTTACAGTTATGAAGGTAGGTTATA AATTTGGTGGTGAAAATTAA
Downstream 100 bases:
>100_bases ATAACTAATAAAAGTATAAATAAATTTTAGAAGTATTATGGAGGAATGAGAGATCCTTAAATTATAAAGTATTATTCAAA AACACGTTTGGGGGAAGTAT
Product: sensor histidine kinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 451; Mature: 451
Protein sequence:
>451_residues MHTIRKRLSILFVICSVAGILLVTLFVNATINNKFDAYIVDVQDKRYQRIVSYFEEVYKAQGKWTKNSGVELMHEAHMGN YCLTLLDINKKTIWGMNPNDIRLNTMPVKDRGVYNTKTFEIKSEGKVVGYVGIGQYSSLLLSEEDISFKTSINKSIVASG ILTLVIIITISLYFSKQFSIPIKEVANLSVNLSKGDFDGKSSVESNIEELENLRKSVNILAEKLKHQDSIRRRLVSDISH EIRTPLNVLQNNLEAMIDGVLPVTEERLNCLNEEVVRFGRLLNNLNVLKEFESESIKLNFQKIFLDELIADICSDFYAIA ENKNIKLQYHIENHEDYSITGDRDRLKQVFINLLSNALKFTEDGGEVLIKIYKSDKNIVVEVKDNGVGIKKEDLPFIFER LYRGDKSRHQFKGNGIGLTIVKNILQLHYASIDLESEEGEGTTFKVYFHRM
Sequences:
>Translated_451_residues MHTIRKRLSILFVICSVAGILLVTLFVNATINNKFDAYIVDVQDKRYQRIVSYFEEVYKAQGKWTKNSGVELMHEAHMGN YCLTLLDINKKTIWGMNPNDIRLNTMPVKDRGVYNTKTFEIKSEGKVVGYVGIGQYSSLLLSEEDISFKTSINKSIVASG ILTLVIIITISLYFSKQFSIPIKEVANLSVNLSKGDFDGKSSVESNIEELENLRKSVNILAEKLKHQDSIRRRLVSDISH EIRTPLNVLQNNLEAMIDGVLPVTEERLNCLNEEVVRFGRLLNNLNVLKEFESESIKLNFQKIFLDELIADICSDFYAIA ENKNIKLQYHIENHEDYSITGDRDRLKQVFINLLSNALKFTEDGGEVLIKIYKSDKNIVVEVKDNGVGIKKEDLPFIFER LYRGDKSRHQFKGNGIGLTIVKNILQLHYASIDLESEEGEGTTFKVYFHRM >Mature_451_residues MHTIRKRLSILFVICSVAGILLVTLFVNATINNKFDAYIVDVQDKRYQRIVSYFEEVYKAQGKWTKNSGVELMHEAHMGN YCLTLLDINKKTIWGMNPNDIRLNTMPVKDRGVYNTKTFEIKSEGKVVGYVGIGQYSSLLLSEEDISFKTSINKSIVASG ILTLVIIITISLYFSKQFSIPIKEVANLSVNLSKGDFDGKSSVESNIEELENLRKSVNILAEKLKHQDSIRRRLVSDISH EIRTPLNVLQNNLEAMIDGVLPVTEERLNCLNEEVVRFGRLLNNLNVLKEFESESIKLNFQKIFLDELIADICSDFYAIA ENKNIKLQYHIENHEDYSITGDRDRLKQVFINLLSNALKFTEDGGEVLIKIYKSDKNIVVEVKDNGVGIKKEDLPFIFER LYRGDKSRHQFKGNGIGLTIVKNILQLHYASIDLESEEGEGTTFKVYFHRM
Specific function: Member of the two-component regulatory system resD/resE involved in the global regulation of aerobic and anaerobic respiration. Probably phosphorylates resD [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PAS (PER-ARNT-SIM) domain [H]
Homologues:
Organism=Escherichia coli, GI1788393, Length=255, Percent_Identity=34.9019607843137, Blast_Score=144, Evalue=1e-35, Organism=Escherichia coli, GI1786783, Length=296, Percent_Identity=27.7027027027027, Blast_Score=116, Evalue=3e-27, Organism=Escherichia coli, GI1786600, Length=223, Percent_Identity=31.8385650224215, Blast_Score=115, Evalue=8e-27, Organism=Escherichia coli, GI145693157, Length=236, Percent_Identity=27.1186440677966, Blast_Score=105, Evalue=7e-24, Organism=Escherichia coli, GI48994928, Length=241, Percent_Identity=28.6307053941909, Blast_Score=101, Evalue=9e-23, Organism=Escherichia coli, GI1788713, Length=251, Percent_Identity=29.8804780876494, Blast_Score=97, Evalue=3e-21, Organism=Escherichia coli, GI1789149, Length=259, Percent_Identity=23.9382239382239, Blast_Score=87, Evalue=2e-18, Organism=Escherichia coli, GI1790346, Length=295, Percent_Identity=25.0847457627119, Blast_Score=86, Evalue=6e-18, Organism=Escherichia coli, GI87082128, Length=291, Percent_Identity=23.0240549828179, Blast_Score=82, Evalue=6e-17, Organism=Escherichia coli, GI1789403, Length=313, Percent_Identity=25.8785942492013, Blast_Score=81, Evalue=1e-16, Organism=Escherichia coli, GI1790436, Length=233, Percent_Identity=27.0386266094421, Blast_Score=81, Evalue=2e-16, Organism=Escherichia coli, GI1790551, Length=299, Percent_Identity=26.7558528428094, Blast_Score=79, Evalue=5e-16, Organism=Escherichia coli, GI1787894, Length=288, Percent_Identity=25, Blast_Score=75, Evalue=8e-15, Organism=Escherichia coli, GI1786912, Length=233, Percent_Identity=26.1802575107296, Blast_Score=74, Evalue=2e-14, Organism=Escherichia coli, GI1790861, Length=249, Percent_Identity=25.3012048192771, Blast_Score=73, Evalue=5e-14, Organism=Escherichia coli, GI1788549, Length=215, Percent_Identity=25.1162790697674, Blast_Score=70, Evalue=2e-13, Organism=Escherichia coli, GI87081816, Length=250, Percent_Identity=25.2, Blast_Score=70, Evalue=3e-13, Organism=Escherichia coli, GI1788279, Length=252, Percent_Identity=23.015873015873, Blast_Score=69, Evalue=7e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR003660 - InterPro: IPR000014 - InterPro: IPR013767 - InterPro: IPR004358 - InterPro: IPR003661 - InterPro: IPR005467 - InterPro: IPR009082 [H]
Pfam domain/function: PF00672 HAMP; PF02518 HATPase_c; PF00512 HisKA; PF00989 PAS [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 51579; Mature: 51579
Theoretical pI: Translated: 7.07; Mature: 7.07
Prosite motif: PS50885 HAMP ; PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHTIRKRLSILFVICSVAGILLVTLFVNATINNKFDAYIVDVQDKRYQRIVSYFEEVYKA CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHHHHHHHH QGKWTKNSGVELMHEAHMGNYCLTLLDINKKTIWGMNPNDIRLNTMPVKDRGVYNTKTFE CCCCCCCCCHHHHHHHCCCCEEEEEEECCCCEEECCCCCCEEEEEECCCCCCCCCCEEEE IKSEGKVVGYVGIGQYSSLLLSEEDISFKTSINKSIVASGILTLVIIITISLYFSKQFSI EECCCCEEEEEECCCHHHHHCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCC PIKEVANLSVNLSKGDFDGKSSVESNIEELENLRKSVNILAEKLKHQDSIRRRLVSDISH CHHHHCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EIRTPLNVLQNNLEAMIDGVLPVTEERLNCLNEEVVRFGRLLNNLNVLKEFESESIKLNF HHHCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHH QKIFLDELIADICSDFYAIAENKNIKLQYHIENHEDYSITGDRDRLKQVFINLLSNALKF HHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCEEECCCHHHHHHHHHHHHHHHHHC TEDGGEVLIKIYKSDKNIVVEVKDNGVGIKKEDLPFIFERLYRGDKSRHQFKGNGIGLTI CCCCCEEEEEEEECCCEEEEEECCCCCCCCCCCHHHHHHHHHCCCCCHHHCCCCCEEHHH VKNILQLHYASIDLESEEGEGTTFKVYFHRM HHHHHHHHHHHEEEECCCCCCCEEEEEEECC >Mature Secondary Structure MHTIRKRLSILFVICSVAGILLVTLFVNATINNKFDAYIVDVQDKRYQRIVSYFEEVYKA CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHHHHHHHH QGKWTKNSGVELMHEAHMGNYCLTLLDINKKTIWGMNPNDIRLNTMPVKDRGVYNTKTFE CCCCCCCCCHHHHHHHCCCCEEEEEEECCCCEEECCCCCCEEEEEECCCCCCCCCCEEEE IKSEGKVVGYVGIGQYSSLLLSEEDISFKTSINKSIVASGILTLVIIITISLYFSKQFSI EECCCCEEEEEECCCHHHHHCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCC PIKEVANLSVNLSKGDFDGKSSVESNIEELENLRKSVNILAEKLKHQDSIRRRLVSDISH CHHHHCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EIRTPLNVLQNNLEAMIDGVLPVTEERLNCLNEEVVRFGRLLNNLNVLKEFESESIKLNF HHHCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHH QKIFLDELIADICSDFYAIAENKNIKLQYHIENHEDYSITGDRDRLKQVFINLLSNALKF HHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCEEECCCHHHHHHHHHHHHHHHHHC TEDGGEVLIKIYKSDKNIVVEVKDNGVGIKKEDLPFIFERLYRGDKSRHQFKGNGIGLTI CCCCCEEEEEEEECCCEEEEEECCCCCCCCCCCHHHHHHHHHCCCCCHHHCCCCCEEHHH VKNILQLHYASIDLESEEGEGTTFKVYFHRM HHHHHHHHHHHEEEECCCCCCCEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 7934829; 9384377; 8631715 [H]