Click here to switch to the map view.

The map label for this gene is yadT [C]

Identifier: 148378966

GI number: 148378966

Start: 1073031

End: 1074053

Strand: Reverse

Name: yadT [C]

Synonym: CBO0974

Alternate gene names: 148378966

Gene position: 1074053-1073031 (Counterclockwise)

Preceding gene: 148378967

Following gene: 148378965

Centisome position: 27.63

GC content: 31.18

Gene sequence:

>1023_bases
ATGAACAAAAAATTAATTGCTATCACATTATCTACATTAGTATTGGTAGGAGGTATTACTGGTTGCTCTAATAAAAGTAC
TAGCACAAGTAGTGACAGTACTAAAACTGAACAATCTGCTGATAAGCCACTAAAACTAGATTTTGTACAAACGAGTAGAC
ATGATGATAGTGCAAACAAATTTTCAATGGTTTATGATAAAAAACCAGAAAAATCTTTAGCTATAACAAATTGCATGATC
GAAATGATGTTATCTATGGGTCTGCAAGACAAAATGGCTGGTACTGCATACGCAGAAAACAATATACTACCAGATTTAAA
ACCTGCCTATGATAAGGTACCTGTTATGAGTAAAACTTATCCATCTAAAGAACAAATACTATCAAATGGAGTTGACTTTA
TAATAGGTTGGGGCGGCGACTTCAATGATAAAGGTGTAGGTAGTATAGACTGGTTAAATGAAAATAAGATAAAAGCTTAC
ATTCCAAGATCTGTAAATCCAGATGCAACAGTTGATTCAATCTACGAAGATTTTAAAAATCTTGGAATTATCTTTGACAA
GGAAGATAAAGCTAAAGAATTAACAGAAAAAATGAAATCAGAACTAAAAGAAACTACAGATAAAATTAAAAACGTTGATA
AAAAAGTAAAAGTTCTAGGATATGACTCTGGAAAAGACAAAGCTGTAGTTGTTGGAAAAGGTATAAACAACGAAATAATT
AAACTTGCGCAGGGTGAAAATGTCTTCGGCGATATGAAAAAAGATTATCCTGAAGTATCTATGGAAGAAATAATAAAAAG
AAATCCAGATGTAATAATGGTTTTAGAGTATTCCGTTGGAAACGGCGGAGATACCTTTGAAAACAAGGTTAAGGCTCTTA
AAGCAAATCCTGCTTTAAAGGATGTAAATGCTATAAAAAACAACAAGTTTATAAAAGTTGAATTAACTGAATTATATCCT
GGTGTAAGAGTTCCTAAAACTGTAAATAAATTAGCTAAAGAATTCTACCCAGATAAATTTTAG

Upstream 100 bases:

>100_bases
AAATTCCTGTCATTTATTGACGATTAATTATATTTTATGCACACATTTTATGATTGATTGTTAATCAAAAAACAAAGTAA
ACGTTTTGGGAGGAATTTTT

Downstream 100 bases:

>100_bases
TTGGTGATAAGAATGAATAATAATAAACAAATTTTAAAGTGCAAAAATAATTGCACTTTAAAATTTATTCTATTAATTAT
AGCCTTGTTTGTAATAACTA

Product: putative iron chelate uptake ABC transporter, solute-binding protein

Products: NA

Alternate protein names: ABC Transporter; Iron Transport Lipoprotein; Transporter Subunit; Fe3+-Hydroxamate ABC Transporter Periplasmic Protein; Iron Compound ABC Transporter

Number of amino acids: Translated: 340; Mature: 340

Protein sequence:

>340_residues
MNKKLIAITLSTLVLVGGITGCSNKSTSTSSDSTKTEQSADKPLKLDFVQTSRHDDSANKFSMVYDKKPEKSLAITNCMI
EMMLSMGLQDKMAGTAYAENNILPDLKPAYDKVPVMSKTYPSKEQILSNGVDFIIGWGGDFNDKGVGSIDWLNENKIKAY
IPRSVNPDATVDSIYEDFKNLGIIFDKEDKAKELTEKMKSELKETTDKIKNVDKKVKVLGYDSGKDKAVVVGKGINNEII
KLAQGENVFGDMKKDYPEVSMEEIIKRNPDVIMVLEYSVGNGGDTFENKVKALKANPALKDVNAIKNNKFIKVELTELYP
GVRVPKTVNKLAKEFYPDKF

Sequences:

>Translated_340_residues
MNKKLIAITLSTLVLVGGITGCSNKSTSTSSDSTKTEQSADKPLKLDFVQTSRHDDSANKFSMVYDKKPEKSLAITNCMI
EMMLSMGLQDKMAGTAYAENNILPDLKPAYDKVPVMSKTYPSKEQILSNGVDFIIGWGGDFNDKGVGSIDWLNENKIKAY
IPRSVNPDATVDSIYEDFKNLGIIFDKEDKAKELTEKMKSELKETTDKIKNVDKKVKVLGYDSGKDKAVVVGKGINNEII
KLAQGENVFGDMKKDYPEVSMEEIIKRNPDVIMVLEYSVGNGGDTFENKVKALKANPALKDVNAIKNNKFIKVELTELYP
GVRVPKTVNKLAKEFYPDKF
>Mature_340_residues
MNKKLIAITLSTLVLVGGITGCSNKSTSTSSDSTKTEQSADKPLKLDFVQTSRHDDSANKFSMVYDKKPEKSLAITNCMI
EMMLSMGLQDKMAGTAYAENNILPDLKPAYDKVPVMSKTYPSKEQILSNGVDFIIGWGGDFNDKGVGSIDWLNENKIKAY
IPRSVNPDATVDSIYEDFKNLGIIFDKEDKAKELTEKMKSELKETTDKIKNVDKKVKVLGYDSGKDKAVVVGKGINNEII
KLAQGENVFGDMKKDYPEVSMEEIIKRNPDVIMVLEYSVGNGGDTFENKVKALKANPALKDVNAIKNNKFIKVELTELYP
GVRVPKTVNKLAKEFYPDKF

Specific function: Unknown

COG id: COG0614

COG function: function code P; ABC-type Fe3+-hydroxamate transport system, periplasmic component

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 37767; Mature: 37767

Theoretical pI: Translated: 8.52; Mature: 8.52

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS50983 FE_B12_PBP

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKKLIAITLSTLVLVGGITGCSNKSTSTSSDSTKTEQSADKPLKLDFVQTSRHDDSANK
CCCEEEEHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHCCCCEEEEEEECCCCCCCCCC
FSMVYDKKPEKSLAITNCMIEMMLSMGLQDKMAGTAYAENNILPDLKPAYDKVPVMSKTY
EEEEECCCCCHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCCCCCCCHHHCCCCCCCCC
PSKEQILSNGVDFIIGWGGDFNDKGVGSIDWLNENKIKAYIPRSVNPDATVDSIYEDFKN
CCHHHHHHCCCEEEEECCCCCCCCCCCCEEECCCCCEEEEECCCCCCCCHHHHHHHHHHH
LGIIFDKEDKAKELTEKMKSELKETTDKIKNVDKKVKVLGYDSGKDKAVVVGKGINNEII
CCEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCEEEEECCCCCHHE
KLAQGENVFGDMKKDYPEVSMEEIIKRNPDVIMVLEYSVGNGGDTFENKVKALKANPALK
EEECCCCCCCCHHHCCCCCCHHHHHHCCCCEEEEEEEECCCCCCHHHHHHHHHHCCCCHH
DVNAIKNNKFIKVELTELYPGVRVPKTVNKLAKEFYPDKF
HHHHHCCCCEEEEEEHHHCCCCCCCHHHHHHHHHHCCCCC
>Mature Secondary Structure
MNKKLIAITLSTLVLVGGITGCSNKSTSTSSDSTKTEQSADKPLKLDFVQTSRHDDSANK
CCCEEEEHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHCCCCEEEEEEECCCCCCCCCC
FSMVYDKKPEKSLAITNCMIEMMLSMGLQDKMAGTAYAENNILPDLKPAYDKVPVMSKTY
EEEEECCCCCHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCCCCCCCHHHCCCCCCCCC
PSKEQILSNGVDFIIGWGGDFNDKGVGSIDWLNENKIKAYIPRSVNPDATVDSIYEDFKN
CCHHHHHHCCCEEEEECCCCCCCCCCCCEEECCCCCEEEEECCCCCCCCHHHHHHHHHHH
LGIIFDKEDKAKELTEKMKSELKETTDKIKNVDKKVKVLGYDSGKDKAVVVGKGINNEII
CCEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCEEEEECCCCCHHE
KLAQGENVFGDMKKDYPEVSMEEIIKRNPDVIMVLEYSVGNGGDTFENKVKALKANPALK
EEECCCCCCCCHHHCCCCCCHHHHHHCCCCEEEEEEEECCCCCCHHHHHHHHHHCCCCHH
DVNAIKNNKFIKVELTELYPGVRVPKTVNKLAKEFYPDKF
HHHHHCCCCEEEEEEHHHCCCCCCCHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA