Definition | Clostridium botulinum A str. ATCC 3502, complete genome. |
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Accession | NC_009495 |
Length | 3,886,916 |
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The map label for this gene is 148378845
Identifier: 148378845
GI number: 148378845
Start: 960492
End: 961046
Strand: Reverse
Name: 148378845
Synonym: CBO0853
Alternate gene names: NA
Gene position: 961046-960492 (Counterclockwise)
Preceding gene: 148378846
Following gene: 148378844
Centisome position: 24.73
GC content: 32.25
Gene sequence:
>555_bases ATGAACATACTATCTGTTCTAGCAAGCCCGCGAAATCAAGGCAATACGGCTATTTTATTGAAAGAATATTTAAAAGGTGT AGAGGGCCTAACATCCCAAGTTGAAATAGAAACAATTTATCTTCAAGCAAAAAATATACAATATTGTACAGGCTGCAATA CCTGCAAAAAGAGCAGTCAAAGTCAATGTGTATTAAAAGATGATATGCAGGATATTTATAAAAGTGTGGAAAAAGCAGAT GTCTTGATTTTGGCAACCCCTGTCTATGTTTTTAATATGACTGCACAGTTAAAAACTTTTTTAGACAGGCTATATGCAGT AGATCATAATACTTTATTAAACAAAAAAATTGTATTGCTAACCACCTATGGAGATAGCAGTGAAGCTAATTCAGGAGTTA AAAATATCGTACAATCCATCACTATGCTTTCACAATATCTTGGTATGGAGTTCATACAAAATCTTAATGTAAGCACATAT AAGGTTCAGGTTTCTGAAAATGAGCAATCTAAAAAAGCTGCCTATACATTGGGATCAGACATTTTAAAATATTAA
Upstream 100 bases:
>100_bases TAAAAAGGCAGCCTTGCCTTTTTAAAAATATTATAATATGCATATGTGTGCACTAAAGTATTCATATGTTCACCAATTTA ATTGAGAGGAAGGAATAAAT
Downstream 100 bases:
>100_bases TTAAGAGGTGTTTCAAGATGGTAACAATTGTATTTGCACATCCATGGCATGGAAGTTTTAATAAGGCTATACTGGATACA GTAACAACTGTTTTAGAACA
Product: iron-sulfur flavoprotein
Products: NA
Alternate protein names: AF-1; Af1; Isf-1 [H]
Number of amino acids: Translated: 184; Mature: 184
Protein sequence:
>184_residues MNILSVLASPRNQGNTAILLKEYLKGVEGLTSQVEIETIYLQAKNIQYCTGCNTCKKSSQSQCVLKDDMQDIYKSVEKAD VLILATPVYVFNMTAQLKTFLDRLYAVDHNTLLNKKIVLLTTYGDSSEANSGVKNIVQSITMLSQYLGMEFIQNLNVSTY KVQVSENEQSKKAAYTLGSDILKY
Sequences:
>Translated_184_residues MNILSVLASPRNQGNTAILLKEYLKGVEGLTSQVEIETIYLQAKNIQYCTGCNTCKKSSQSQCVLKDDMQDIYKSVEKAD VLILATPVYVFNMTAQLKTFLDRLYAVDHNTLLNKKIVLLTTYGDSSEANSGVKNIVQSITMLSQYLGMEFIQNLNVSTY KVQVSENEQSKKAAYTLGSDILKY >Mature_184_residues MNILSVLASPRNQGNTAILLKEYLKGVEGLTSQVEIETIYLQAKNIQYCTGCNTCKKSSQSQCVLKDDMQDIYKSVEKAD VLILATPVYVFNMTAQLKTFLDRLYAVDHNTLLNKKIVLLTTYGDSSEANSGVKNIVQSITMLSQYLGMEFIQNLNVSTY KVQVSENEQSKKAAYTLGSDILKY
Specific function: Redox-active protein probably involved in electron transport [H]
COG id: COG0655
COG function: function code R; Multimeric flavodoxin WrbA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ssuE family. Isf subfamily [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005025 [H]
Pfam domain/function: PF03358 FMN_red [H]
EC number: NA
Molecular weight: Translated: 20560; Mature: 20560
Theoretical pI: Translated: 7.89; Mature: 7.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNILSVLASPRNQGNTAILLKEYLKGVEGLTSQVEIETIYLQAKNIQYCTGCNTCKKSSQ CCHHHHHCCCCCCCCEEEHHHHHHHHHHCCCCCEEEEEEEEEECCCEEECCCCHHHCCCC SQCVLKDDMQDIYKSVEKADVLILATPVYVFNMTAQLKTFLDRLYAVDHNTLLNKKIVLL CCCHHHHHHHHHHHHHHHCCEEEEECCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEE TTYGDSSEANSGVKNIVQSITMLSQYLGMEFIQNLNVSTYKVQVSENEQSKKAAYTLGSD EECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHH ILKY HHCC >Mature Secondary Structure MNILSVLASPRNQGNTAILLKEYLKGVEGLTSQVEIETIYLQAKNIQYCTGCNTCKKSSQ CCHHHHHCCCCCCCCEEEHHHHHHHHHHCCCCCEEEEEEEEEECCCEEECCCCHHHCCCC SQCVLKDDMQDIYKSVEKADVLILATPVYVFNMTAQLKTFLDRLYAVDHNTLLNKKIVLL CCCHHHHHHHHHHHHHHHCCEEEEECCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEE TTYGDSSEANSGVKNIVQSITMLSQYLGMEFIQNLNVSTYKVQVSENEQSKKAAYTLGSD EECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHH ILKY HHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9389475 [H]