Definition | Clostridium botulinum A str. ATCC 3502, complete genome. |
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Accession | NC_009495 |
Length | 3,886,916 |
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The map label for this gene is ha70 [H]
Identifier: 148378796
GI number: 148378796
Start: 901881
End: 903761
Strand: Reverse
Name: ha70 [H]
Synonym: CBO0801
Alternate gene names: 148378796
Gene position: 903761-901881 (Counterclockwise)
Preceding gene: 148378797
Following gene: 148378791
Centisome position: 23.25
GC content: 26.58
Gene sequence:
>1881_bases ATGAATTCATCTATAAAAAAAATTTATAATGATATACAAGAAAAAGTTATAAACTATAGTGATACTATTGATTTAGCTGA TGGTAATTATGTAGTTAGAAGAGGGGATGGATGGATATTATCTAGACAAAATCAAATATTAGGTGGAAGTGTAATTAGTA ATGGATCAACAGGAATAGTTGGGGACCTACGTGTAAATGATAATGCGATACCATATTATTATCCAACACCATCTTTCAAT GAAGAATATATAAAAAATAATATACAAACTGTATTTACTAACTTTACTGAAGCTAATCAAATTCCAATAGGATTTGAATT TAGTAAAACCGCTCCCTCAAATAAAAACTTATATATGTATTTACAATATACCTACATTAGATATGAAATAATAAAAGTCT TACAACATGAAATTATAGAAAGAGCAGTTTTATATGTTCCATCTCTTGGATATGTTAAGTCTATAGAATTTAATCCAGGG GAAAAAATAAATAAAGATTTTTACTTTCTAACTAATGATAAGTGCATTTTAAATGAACAATTCCTATATAAAAAAATTTT AGAAACTACTAAAAATATACCAACTAACAATATTTTTAATTCTAAAGTTAGTAGCACACAACGAGTATTGCCTTATAGTA ATGGGCTATATGTTATTAATAAGGGTGATGGATATATAAGAACAAATGATAAAGATTTGATAGGTACATTATTAATCGAA GCAGGTTCATCAGGAAGTATTATACAACCTCGATTAAGAAATACAACTAGACCATTATTCACCACAAGTAATGATACAAA ATTCTCACAACAATATACTGAAGAAAGACTTAAAGACGCTTTCAATGTACAATTATTTAATACATCAACATCGTTATTTA AATTTGTAGAAGAAGCTCCTTCAGATAAAAATATATGCATAAAGGCTTATAATACCTATGAAAAATATGAATTAATAGAC TATCAAAATGGAAGTATTGTTAATAAAGCTGAGTATTATCTTCCTTCCTTAGGATATTGTGAAGTAACTAATGCTCCTTC ACCTGAATCTGAAGTAGTTAAAATGCAAGTGGCTGAAGATGGATTTATACAAAATGGTCCCGAGGAAGAAATTGTAGTAG GTGTCATAGACCCATCTGAAAATATACAAGAAATAAATACTGCTATTTCAGATAATTACACATATAACATTCCAGGTATT GTAAATAATAATCCATTTTATATATTATTTACAGTAAATACTACAGGAATTTATAAAATTAATGCTCAAAATAATCTACC ATCATTAAAAATATATGAAGCGATAGGTTCTGGTAATAGAAATTTCCAATCTGGGAATTTATGTGATGATGATATTAAAG CAATAAATTATATTACTGGGTTTGACAGTCCTAATGCTAAAAGTTATTTAGTTGTTTTGCTTAATAAGGATAAAAATTAC TACATTAGAGTACCACAAACTTCTTCTAATATAGAAAATCAAATACAATTCAAGAGAGAAGAAGGGGATCTCCGAAATTT AATGAATTCTTCAGTTAATATAATAGATAATCTTAATTCAACAGGTGCACATTACTATACAAGACAAAGCCCTGATGTCC ATGACTATATTTCATATGAATTTACAATACCTGGTAACTTTAATAATAAAGATACATCTAACATTAGGCTTTATACTAGT TATAACCAAGGAATAGGTACTTTATTTAGAGTCACTGAAACTATTGACGGCTATAATTTAATTAATATACAACAAAATTT ACACCTCTTAAATAATACCAATTCAATACGTTTATTAAATGGTGCAATTTATATATTAAAAGTAGAAGTTACAGAATTAA ATAACTATAATATAAGATTGCATATAGATATTACTAATTAA
Upstream 100 bases:
>100_bases GAAAATATTTTAAGCCAACCACTACTCCTATTACCGAATTTTGATATATACAATTCAAATCAAATGTTCAAACTTGAAAA AATATAAAGGAGAAAAGTGT
Downstream 100 bases:
>100_bases TATATTACGATTTATTATTAAATAAGAGTCCACCAGCTTATGAAGTGCACTCCAAAGTTTAGATAAAGATCTAAATTTTT GGAGGTGCATTTTTGTGGCA
Product: hemagglutinin component of the neurotoxin complex
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 626; Mature: 626
Protein sequence:
>626_residues MNSSIKKIYNDIQEKVINYSDTIDLADGNYVVRRGDGWILSRQNQILGGSVISNGSTGIVGDLRVNDNAIPYYYPTPSFN EEYIKNNIQTVFTNFTEANQIPIGFEFSKTAPSNKNLYMYLQYTYIRYEIIKVLQHEIIERAVLYVPSLGYVKSIEFNPG EKINKDFYFLTNDKCILNEQFLYKKILETTKNIPTNNIFNSKVSSTQRVLPYSNGLYVINKGDGYIRTNDKDLIGTLLIE AGSSGSIIQPRLRNTTRPLFTTSNDTKFSQQYTEERLKDAFNVQLFNTSTSLFKFVEEAPSDKNICIKAYNTYEKYELID YQNGSIVNKAEYYLPSLGYCEVTNAPSPESEVVKMQVAEDGFIQNGPEEEIVVGVIDPSENIQEINTAISDNYTYNIPGI VNNNPFYILFTVNTTGIYKINAQNNLPSLKIYEAIGSGNRNFQSGNLCDDDIKAINYITGFDSPNAKSYLVVLLNKDKNY YIRVPQTSSNIENQIQFKREEGDLRNLMNSSVNIIDNLNSTGAHYYTRQSPDVHDYISYEFTIPGNFNNKDTSNIRLYTS YNQGIGTLFRVTETIDGYNLINIQQNLHLLNNTNSIRLLNGAIYILKVEVTELNNYNIRLHIDITN
Sequences:
>Translated_626_residues MNSSIKKIYNDIQEKVINYSDTIDLADGNYVVRRGDGWILSRQNQILGGSVISNGSTGIVGDLRVNDNAIPYYYPTPSFN EEYIKNNIQTVFTNFTEANQIPIGFEFSKTAPSNKNLYMYLQYTYIRYEIIKVLQHEIIERAVLYVPSLGYVKSIEFNPG EKINKDFYFLTNDKCILNEQFLYKKILETTKNIPTNNIFNSKVSSTQRVLPYSNGLYVINKGDGYIRTNDKDLIGTLLIE AGSSGSIIQPRLRNTTRPLFTTSNDTKFSQQYTEERLKDAFNVQLFNTSTSLFKFVEEAPSDKNICIKAYNTYEKYELID YQNGSIVNKAEYYLPSLGYCEVTNAPSPESEVVKMQVAEDGFIQNGPEEEIVVGVIDPSENIQEINTAISDNYTYNIPGI VNNNPFYILFTVNTTGIYKINAQNNLPSLKIYEAIGSGNRNFQSGNLCDDDIKAINYITGFDSPNAKSYLVVLLNKDKNY YIRVPQTSSNIENQIQFKREEGDLRNLMNSSVNIIDNLNSTGAHYYTRQSPDVHDYISYEFTIPGNFNNKDTSNIRLYTS YNQGIGTLFRVTETIDGYNLINIQQNLHLLNNTNSIRLLNGAIYILKVEVTELNNYNIRLHIDITN >Mature_626_residues MNSSIKKIYNDIQEKVINYSDTIDLADGNYVVRRGDGWILSRQNQILGGSVISNGSTGIVGDLRVNDNAIPYYYPTPSFN EEYIKNNIQTVFTNFTEANQIPIGFEFSKTAPSNKNLYMYLQYTYIRYEIIKVLQHEIIERAVLYVPSLGYVKSIEFNPG EKINKDFYFLTNDKCILNEQFLYKKILETTKNIPTNNIFNSKVSSTQRVLPYSNGLYVINKGDGYIRTNDKDLIGTLLIE AGSSGSIIQPRLRNTTRPLFTTSNDTKFSQQYTEERLKDAFNVQLFNTSTSLFKFVEEAPSDKNICIKAYNTYEKYELID YQNGSIVNKAEYYLPSLGYCEVTNAPSPESEVVKMQVAEDGFIQNGPEEEIVVGVIDPSENIQEINTAISDNYTYNIPGI VNNNPFYILFTVNTTGIYKINAQNNLPSLKIYEAIGSGNRNFQSGNLCDDDIKAINYITGFDSPNAKSYLVVLLNKDKNY YIRVPQTSSNIENQIQFKREEGDLRNLMNSSVNIIDNLNSTGAHYYTRQSPDVHDYISYEFTIPGNFNNKDTSNIRLYTS YNQGIGTLFRVTETIDGYNLINIQQNLHLLNNTNSIRLLNGAIYILKVEVTELNNYNIRLHIDITN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003897 [H]
Pfam domain/function: PF03505 Clenterotox [H]
EC number: NA
Molecular weight: Translated: 71392; Mature: 71392
Theoretical pI: Translated: 4.89; Mature: 4.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNSSIKKIYNDIQEKVINYSDTIDLADGNYVVRRGDGWILSRQNQILGGSVISNGSTGIV CCCHHHHHHHHHHHHHCCCCCEEEECCCCEEEECCCCEEEECCCCEECCEEECCCCCCEE GDLRVNDNAIPYYYPTPSFNEEYIKNNIQTVFTNFTEANQIPIGFEFSKTAPSNKNLYMY EEEEECCCCCEEEECCCCCCHHHHHCCCEEEEECCCCCCCCEEEEEECCCCCCCCCEEEE LQYTYIRYEIIKVLQHEIIERAVLYVPSLGYVKSIEFNPGEKINKDFYFLTNDKCILNEQ EEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCEEEEECCEEEECHH FLYKKILETTKNIPTNNIFNSKVSSTQRVLPYSNGLYVINKGDGYIRTNDKDLIGTLLIE HHHHHHHHHHCCCCCCCCCCCCCCCCEEECCCCCCEEEEECCCCEEEECCCCEEEEEEEE AGSSGSIIQPRLRNTTRPLFTTSNDTKFSQQYTEERLKDAFNVQLFNTSTSLFKFVEEAP CCCCCCEECCHHCCCCCCEEECCCCCHHHHHHHHHHHHHHEEEEEEECCHHHHHHHHHCC SDKNICIKAYNTYEKYELIDYQNGSIVNKAEYYLPSLGYCEVTNAPSPESEVVKMQVAED CCCCEEEEEECCCCEEEEEECCCCCEEECHHHHCCCCCEEEECCCCCCCCCEEEEEECCC GFIQNGPEEEIVVGVIDPSENIQEINTAISDNYTYNIPGIVNNNPFYILFTVNTTGIYKI CCCCCCCCCCEEEEEECCCCHHHHHHHHHCCCEEEECCEEECCCCEEEEEEECCCEEEEE NAQNNLPSLKIYEAIGSGNRNFQSGNLCDDDIKAINYITGFDSPNAKSYLVVLLNKDKNY ECCCCCCCEEEEEECCCCCCCCCCCCCCCHHHHEEEEEECCCCCCCCEEEEEEEECCCCE YIRVPQTSSNIENQIQFKREEGDLRNLMNSSVNIIDNLNSTGAHYYTRQSPDVHDYISYE EEECCCCCCCCCCEEEEEECCCHHHHHHCCCCEEEECCCCCCCEEEECCCCCCCCEEEEE FTIPGNFNNKDTSNIRLYTSYNQGIGTLFRVTETIDGYNLINIQQNLHLLNNTNSIRLLN EEECCCCCCCCCCCEEEEEECCCCCCEEEEEEECCCCCEEEEEECCEEEECCCCEEEEEE GAIYILKVEVTELNNYNIRLHIDITN EEEEEEEEEEEECCCEEEEEEEEECC >Mature Secondary Structure MNSSIKKIYNDIQEKVINYSDTIDLADGNYVVRRGDGWILSRQNQILGGSVISNGSTGIV CCCHHHHHHHHHHHHHCCCCCEEEECCCCEEEECCCCEEEECCCCEECCEEECCCCCCEE GDLRVNDNAIPYYYPTPSFNEEYIKNNIQTVFTNFTEANQIPIGFEFSKTAPSNKNLYMY EEEEECCCCCEEEECCCCCCHHHHHCCCEEEEECCCCCCCCEEEEEECCCCCCCCCEEEE LQYTYIRYEIIKVLQHEIIERAVLYVPSLGYVKSIEFNPGEKINKDFYFLTNDKCILNEQ EEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCEEEEECCEEEECHH FLYKKILETTKNIPTNNIFNSKVSSTQRVLPYSNGLYVINKGDGYIRTNDKDLIGTLLIE HHHHHHHHHHCCCCCCCCCCCCCCCCEEECCCCCCEEEEECCCCEEEECCCCEEEEEEEE AGSSGSIIQPRLRNTTRPLFTTSNDTKFSQQYTEERLKDAFNVQLFNTSTSLFKFVEEAP CCCCCCEECCHHCCCCCCEEECCCCCHHHHHHHHHHHHHHEEEEEEECCHHHHHHHHHCC SDKNICIKAYNTYEKYELIDYQNGSIVNKAEYYLPSLGYCEVTNAPSPESEVVKMQVAED CCCCEEEEEECCCCEEEEEECCCCCEEECHHHHCCCCCEEEECCCCCCCCCEEEEEECCC GFIQNGPEEEIVVGVIDPSENIQEINTAISDNYTYNIPGIVNNNPFYILFTVNTTGIYKI CCCCCCCCCCEEEEEECCCCHHHHHHHHHCCCEEEECCEEECCCCEEEEEEECCCEEEEE NAQNNLPSLKIYEAIGSGNRNFQSGNLCDDDIKAINYITGFDSPNAKSYLVVLLNKDKNY ECCCCCCCEEEEEECCCCCCCCCCCCCCCHHHHEEEEEECCCCCCCCEEEEEEEECCCCE YIRVPQTSSNIENQIQFKREEGDLRNLMNSSVNIIDNLNSTGAHYYTRQSPDVHDYISYE EEECCCCCCCCCCEEEEEECCCHHHHHHCCCCEEEECCCCCCCEEEECCCCCCCCEEEEE FTIPGNFNNKDTSNIRLYTSYNQGIGTLFRVTETIDGYNLINIQQNLHLLNNTNSIRLLN EEECCCCCCCCCCCEEEEEECCCCCCEEEEEEECCCCCEEEEEECCEEEECCCCEEEEEE GAIYILKVEVTELNNYNIRLHIDITN EEEEEEEEEEEECCCEEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7802661; 8028579 [H]