Definition | Clostridium botulinum A str. ATCC 3502, complete genome. |
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Accession | NC_009495 |
Length | 3,886,916 |
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The map label for this gene is 148378790
Identifier: 148378790
GI number: 148378790
Start: 897205
End: 897984
Strand: Reverse
Name: 148378790
Synonym: CBO0794
Alternate gene names: NA
Gene position: 897984-897205 (Counterclockwise)
Preceding gene: 148378791
Following gene: 148378789
Centisome position: 23.1
GC content: 21.54
Gene sequence:
>780_bases TTGAAATATTTTACGTATAATTCTATATTTGTTACATATTTCCTTTGTTTGAAAAGTAAAACAAATAAGCAGATTAACAT AACTTTTAATTTAGACTTTATATACAATATTTGTACAATAATTTCTGACAAATGGAATAATAATTTAAACTTTATATATA TGGAATACCCAAGATTATTATTAGATCATTCTTTAGTTGCGAATGGAAGCGAAAAAGTTAAAGTACAAAAACAAACAATT ATTCAGCAAAATCACTCTAATAAAGATGTTAAATATAAATACAATGATTATGTCCCTAAGGATAGAATAGCTAGAATATT AATTCCTGAATCTAATATTGATACTAAACAAAGTAGACTCATAGACAATAAAGATCTTAATATATTATCTAATATTCTTA AATATAAAAAAGCAGATTTTCTAACCAATAAGACCATAGTCTTTAATTTAATTGATATTATAAATAATATTTATTGTTCT AAAATTATACGTTCTTATGAAGATTTAAGAAATAGAATTGCAAAGATGACATTATTGAAATTTAATTTTTTCAGAATAGA TAACACTTCTGGTATCCCTGATGCTGTTTATGGAATTTTTTCTAGTTACGAGTATTTAGATAAATCTCAAAACAAAGTTA AAGTTTACGTTGATAGTATTTTATATGATAAAATACTAAAAAATCAAGTATATACAATATATAATGATAAAATAAATCAA TTTGAAATTTCCGATTTATTTTCTAGCAAAAATACAAGTGATATACTTCCTGTAATATAA
Upstream 100 bases:
>100_bases TGAAATTGCTAATAATATAAGTTTATATGGTCCTGGAGTATTTTTTTATTTATAAAAAGTTAGAAATATTGAAGAATTAA AAAAAATTAGAGCAGCCCAA
Downstream 100 bases:
>100_bases AAAGTTGACAAGTGCTCCCCTACCTATCTAGTGTGGGAGTATTTTTTATAAAGAAATTTATTACAATTTCAAAAAGTGTT TCACTTTTATCATTAGACAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 259; Mature: 259
Protein sequence:
>259_residues MKYFTYNSIFVTYFLCLKSKTNKQINITFNLDFIYNICTIISDKWNNNLNFIYMEYPRLLLDHSLVANGSEKVKVQKQTI IQQNHSNKDVKYKYNDYVPKDRIARILIPESNIDTKQSRLIDNKDLNILSNILKYKKADFLTNKTIVFNLIDIINNIYCS KIIRSYEDLRNRIAKMTLLKFNFFRIDNTSGIPDAVYGIFSSYEYLDKSQNKVKVYVDSILYDKILKNQVYTIYNDKINQ FEISDLFSSKNTSDILPVI
Sequences:
>Translated_259_residues MKYFTYNSIFVTYFLCLKSKTNKQINITFNLDFIYNICTIISDKWNNNLNFIYMEYPRLLLDHSLVANGSEKVKVQKQTI IQQNHSNKDVKYKYNDYVPKDRIARILIPESNIDTKQSRLIDNKDLNILSNILKYKKADFLTNKTIVFNLIDIINNIYCS KIIRSYEDLRNRIAKMTLLKFNFFRIDNTSGIPDAVYGIFSSYEYLDKSQNKVKVYVDSILYDKILKNQVYTIYNDKINQ FEISDLFSSKNTSDILPVI >Mature_259_residues MKYFTYNSIFVTYFLCLKSKTNKQINITFNLDFIYNICTIISDKWNNNLNFIYMEYPRLLLDHSLVANGSEKVKVQKQTI IQQNHSNKDVKYKYNDYVPKDRIARILIPESNIDTKQSRLIDNKDLNILSNILKYKKADFLTNKTIVFNLIDIINNIYCS KIIRSYEDLRNRIAKMTLLKFNFFRIDNTSGIPDAVYGIFSSYEYLDKSQNKVKVYVDSILYDKILKNQVYTIYNDKINQ FEISDLFSSKNTSDILPVI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30640; Mature: 30640
Theoretical pI: Translated: 9.61; Mature: 9.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKYFTYNSIFVTYFLCLKSKTNKQINITFNLDFIYNICTIISDKWNNNLNFIYMEYPRLL CCEEEEHHHHHHHHHHHCCCCCCEEEEEEEHHHHHHHHHHHHHCCCCCCCEEEEECCHHH LDHSLVANGSEKVKVQKQTIIQQNHSNKDVKYKYNDYVPKDRIARILIPESNIDTKQSRL HHHHHHCCCCHHEEEHHHHHHHHCCCCCCEEEEECCCCCHHHEEEEEECCCCCCCHHHHH IDNKDLNILSNILKYKKADFLTNKTIVFNLIDIINNIYCSKIIRSYEDLRNRIAKMTLLK CCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEE FNFFRIDNTSGIPDAVYGIFSSYEYLDKSQNKVKVYVDSILYDKILKNQVYTIYNDKINQ EEEEEECCCCCCHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHCCEEEEECCCCCE FEISDLFSSKNTSDILPVI EEHHHHHCCCCCCCCCCCC >Mature Secondary Structure MKYFTYNSIFVTYFLCLKSKTNKQINITFNLDFIYNICTIISDKWNNNLNFIYMEYPRLL CCEEEEHHHHHHHHHHHCCCCCCEEEEEEEHHHHHHHHHHHHHCCCCCCCEEEEECCHHH LDHSLVANGSEKVKVQKQTIIQQNHSNKDVKYKYNDYVPKDRIARILIPESNIDTKQSRL HHHHHHCCCCHHEEEHHHHHHHHCCCCCCEEEEECCCCCHHHEEEEEECCCCCCCHHHHH IDNKDLNILSNILKYKKADFLTNKTIVFNLIDIINNIYCSKIIRSYEDLRNRIAKMTLLK CCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEE FNFFRIDNTSGIPDAVYGIFSSYEYLDKSQNKVKVYVDSILYDKILKNQVYTIYNDKINQ EEEEEECCCCCCHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHCCEEEEECCCCCE FEISDLFSSKNTSDILPVI EEHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA