Definition | Clostridium botulinum A str. ATCC 3502, complete genome. |
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Accession | NC_009495 |
Length | 3,886,916 |
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The map label for this gene is 148378789
Identifier: 148378789
GI number: 148378789
Start: 896036
End: 896905
Strand: Reverse
Name: 148378789
Synonym: CBO0793
Alternate gene names: NA
Gene position: 896905-896036 (Counterclockwise)
Preceding gene: 148378790
Following gene: 148378785
Centisome position: 23.07
GC content: 19.08
Gene sequence:
>870_bases ATGCATGATAAAAACATACATAATTATTGTAATAATAAATATAAAAAAATCATAAAAAAGTATAAAATTTATAATAAGAT AAATATTGATAAGACTTATATTCAATTTTCTTTAACACAAATTAAACAAATGCTAGTTTATTATTATGCAAATTCCAAAG GATTTGTTTCTCTGATATCTAAAAAAAGAATTGCTAGAATGATAGGTTGTTGCGAAAAAAATATAGATATAAATAATAAA CTATTTTTAGATTTAGGTTTAATTTTGATTAGTAGTACTATAAATAACAAATTTTCTTTAATTATTAAAAATTACTCTAA ACATTACAGTAAAAACAATACAAGGTATATTAACTTAGCTACGTTACATATTAACAATGTAAATGCTTTAAGAATAGCTC CCCAAGACATATTAAAACATGACATAAATACTCTTTTAGATCAAGAAACTTATTTTTCTATTAATAATATGAAAACATTT TTACCAGATTATATAAATTGTAAATCTGCTATAGAAAAAGTAATCAATAAATTAAATAGAAATACAATAGCTATGCTTTT TAATAACTCTGAAAAGCTTATATTTGTTATCTCTAAAAATCTACATGGTAAATTACTAAAAAAAGAAATGTATTATAAAT ATAAGAATAACTTTCTAAATTATATTACAGAAAACAATATTAAATTAAATAATTTAAGTTATTCTATTAGTAATATTATA AAACTTGCTTTTGAATACGGATATGATATTATTCAACTAATATTAGGAGAAATAAAGGATATAGCACCAACTATATTTAA TGTTGGTAGATATATAAGATATAAAATAAAAAGATATATTTATATGAATGAACCTTTTTTTACAGTCTAA
Upstream 100 bases:
>100_bases AAGTAAAAACTTAATACACTTTATTACAGAACCAATACCATTATATCACTATAAAACAATTTTATTTAATAAATGCTGTT ATTGTTCTTTCCATAAAAAA
Downstream 100 bases:
>100_bases ATTAAGATCTTTTTCTCATGCCCTTTTTTATATTTTTTTTTATTTTTATTTTATAAATGATACCAAAATACCCATTATTT ATAATCTGCCTTTACATTAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 289; Mature: 289
Protein sequence:
>289_residues MHDKNIHNYCNNKYKKIIKKYKIYNKINIDKTYIQFSLTQIKQMLVYYYANSKGFVSLISKKRIARMIGCCEKNIDINNK LFLDLGLILISSTINNKFSLIIKNYSKHYSKNNTRYINLATLHINNVNALRIAPQDILKHDINTLLDQETYFSINNMKTF LPDYINCKSAIEKVINKLNRNTIAMLFNNSEKLIFVISKNLHGKLLKKEMYYKYKNNFLNYITENNIKLNNLSYSISNII KLAFEYGYDIIQLILGEIKDIAPTIFNVGRYIRYKIKRYIYMNEPFFTV
Sequences:
>Translated_289_residues MHDKNIHNYCNNKYKKIIKKYKIYNKINIDKTYIQFSLTQIKQMLVYYYANSKGFVSLISKKRIARMIGCCEKNIDINNK LFLDLGLILISSTINNKFSLIIKNYSKHYSKNNTRYINLATLHINNVNALRIAPQDILKHDINTLLDQETYFSINNMKTF LPDYINCKSAIEKVINKLNRNTIAMLFNNSEKLIFVISKNLHGKLLKKEMYYKYKNNFLNYITENNIKLNNLSYSISNII KLAFEYGYDIIQLILGEIKDIAPTIFNVGRYIRYKIKRYIYMNEPFFTV >Mature_289_residues MHDKNIHNYCNNKYKKIIKKYKIYNKINIDKTYIQFSLTQIKQMLVYYYANSKGFVSLISKKRIARMIGCCEKNIDINNK LFLDLGLILISSTINNKFSLIIKNYSKHYSKNNTRYINLATLHINNVNALRIAPQDILKHDINTLLDQETYFSINNMKTF LPDYINCKSAIEKVINKLNRNTIAMLFNNSEKLIFVISKNLHGKLLKKEMYYKYKNNFLNYITENNIKLNNLSYSISNII KLAFEYGYDIIQLILGEIKDIAPTIFNVGRYIRYKIKRYIYMNEPFFTV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34273; Mature: 34273
Theoretical pI: Translated: 10.18; Mature: 10.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHDKNIHNYCNNKYKKIIKKYKIYNKINIDKTYIQFSLTQIKQMLVYYYANSKGFVSLIS CCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHEEECCCCHHHHHH KKRIARMIGCCEKNIDINNKLFLDLGLILISSTINNKFSLIIKNYSKHYSKNNTRYINLA HHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEHHHHHCCCCCCEEEEEE TLHINNVNALRIAPQDILKHDINTLLDQETYFSINNMKTFLPDYINCKSAIEKVINKLNR EEEECCCCEEEECHHHHHHHHHHHHHCCHHEEEECCHHHHCCHHCCHHHHHHHHHHHHCC NTIAMLFNNSEKLIFVISKNLHGKLLKKEMYYKYKNNFLNYITENNIKLNNLSYSISNII CEEEEEEECCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHEECCCEEEECCHHHHHHHH KLAFEYGYDIIQLILGEIKDIAPTIFNVGRYIRYKIKRYIYMNEPFFTV HHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEHEEEEECCCEECC >Mature Secondary Structure MHDKNIHNYCNNKYKKIIKKYKIYNKINIDKTYIQFSLTQIKQMLVYYYANSKGFVSLIS CCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHEEECCCCHHHHHH KKRIARMIGCCEKNIDINNKLFLDLGLILISSTINNKFSLIIKNYSKHYSKNNTRYINLA HHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEHHHHHCCCCCCEEEEEE TLHINNVNALRIAPQDILKHDINTLLDQETYFSINNMKTFLPDYINCKSAIEKVINKLNR EEEECCCCEEEECHHHHHHHHHHHHHCCHHEEEECCHHHHCCHHCCHHHHHHHHHHHHCC NTIAMLFNNSEKLIFVISKNLHGKLLKKEMYYKYKNNFLNYITENNIKLNNLSYSISNII CEEEEEEECCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHEECCCEEEECCHHHHHHHH KLAFEYGYDIIQLILGEIKDIAPTIFNVGRYIRYKIKRYIYMNEPFFTV HHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEHEEEEECCCEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA