Definition | Clostridium botulinum A str. ATCC 3502, complete genome. |
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Accession | NC_009495 |
Length | 3,886,916 |
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The map label for this gene is 148378647
Identifier: 148378647
GI number: 148378647
Start: 742733
End: 743923
Strand: Reverse
Name: 148378647
Synonym: CBO0647
Alternate gene names: NA
Gene position: 743923-742733 (Counterclockwise)
Preceding gene: 148378653
Following gene: 148378640
Centisome position: 19.14
GC content: 32.33
Gene sequence:
>1191_bases TTGGAAAGAGTAGTTGGAACTGTTGTTAGAGGTCTTCGTTGCCCTATTATTAACGAAGGAGATTGTATAGAAAATATCGT TGTTGATAGCGTATTAAAGGCTTCTAAAGTTGAAGGATTTGAAATAAATGATAAAGATGTTGTTACTGTAACAGAATCTG TTGTTGCTCGTGCCCAAGGTAACTATGCTACAATAGATCAAATTGCAAAGGATGTAAAATCAAAATTTGGTGATGATACT ATAGGAGTAATATTCCCAATACTAAGCCGTAACCGTTTTGCTATATGCCTTCGTGGTATTGCAAAGGGTGCTAAAAAAAT TGTTCTTATGCTTAGCTATCCATCTGACGAAGTTGGTAATCATCTTGTTGATATAGACATGTTAGATGAAAAAGGAATAA ATCCTTGGAGTGATGTTTTAACTGAAAAACAATTCCGTGATTGTTTTGGAGAAGTTAAACATACATTTACTGGAGTTGAT TACGTTGAATACTATAAATCTTTAATTGAAGAATATGGCGTTGAATGTGAAGTTATATTCTCAAATAATCCAAAGACTAT ATTAAACTACACAAAGAACGTTCTTACTTGTGATATACACACAAGATTTAGAACTAAAAAAATACTTAAAAACAATGGCG GAGAAAAAATATACAGCCTTGATAATATATTATCTTCATCTGTTGATGGTGGTGGTTTTAATGAAAACTATGGTCTTTTA GGTTCAAATAAATCTACTGAAGACACAGTTAAATTATTTCCTCGTAACTGCAAACCTGTTGTAGATAATATACAAGCTAA ACTTAAAGAGAAAACAGGTAAAAATGTTGAAGTTATGATTTATGGAGATGGAGCATTTAAAGATCCTGTAGGTAAGATAT GGGAACTTGCTGATCCAGTAGTTTCACCTGCTTATACAGAAGGACTTGAAGGAACTCCAAACGAAGTTAAACTAAAATAC CTTGCTGACAATGACTTTGCTCATTTAAAAGGTGATGAACTTAAAAAAGCTATATCTGAATATATAAAAAATAAAGAAGA TGATCTTGTAGGTTCTATGGCTTCTCAAGGAACTACACCAAGAAGACTTACAGACCTTATAGGTTCACTTTCTGACTTAA CCTCTGGAAGTGGAGACAAAGGTACTCCTATAATATTCATACAAGGTTATTTTGACAACTATACTAAATAA
Upstream 100 bases:
>100_bases ATATACTATTTATTTTACTTATACCATAAAAATGTTGTATATTACAAGTATAGGAAGTAATTTTAATTCAAAATTTTTTT GAAATTAAGGAGAGATAAAT
Downstream 100 bases:
>100_bases AAACCTATGAAAAATAAATTTCTATATTTAATGTTTAAAACAAACAGCCTAAAATTAAGGAATTATAAAGCCTCATGCAA ATGCATGAGGCTTTTCAAAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 396; Mature: 396
Protein sequence:
>396_residues MERVVGTVVRGLRCPIINEGDCIENIVVDSVLKASKVEGFEINDKDVVTVTESVVARAQGNYATIDQIAKDVKSKFGDDT IGVIFPILSRNRFAICLRGIAKGAKKIVLMLSYPSDEVGNHLVDIDMLDEKGINPWSDVLTEKQFRDCFGEVKHTFTGVD YVEYYKSLIEEYGVECEVIFSNNPKTILNYTKNVLTCDIHTRFRTKKILKNNGGEKIYSLDNILSSSVDGGGFNENYGLL GSNKSTEDTVKLFPRNCKPVVDNIQAKLKEKTGKNVEVMIYGDGAFKDPVGKIWELADPVVSPAYTEGLEGTPNEVKLKY LADNDFAHLKGDELKKAISEYIKNKEDDLVGSMASQGTTPRRLTDLIGSLSDLTSGSGDKGTPIIFIQGYFDNYTK
Sequences:
>Translated_396_residues MERVVGTVVRGLRCPIINEGDCIENIVVDSVLKASKVEGFEINDKDVVTVTESVVARAQGNYATIDQIAKDVKSKFGDDT IGVIFPILSRNRFAICLRGIAKGAKKIVLMLSYPSDEVGNHLVDIDMLDEKGINPWSDVLTEKQFRDCFGEVKHTFTGVD YVEYYKSLIEEYGVECEVIFSNNPKTILNYTKNVLTCDIHTRFRTKKILKNNGGEKIYSLDNILSSSVDGGGFNENYGLL GSNKSTEDTVKLFPRNCKPVVDNIQAKLKEKTGKNVEVMIYGDGAFKDPVGKIWELADPVVSPAYTEGLEGTPNEVKLKY LADNDFAHLKGDELKKAISEYIKNKEDDLVGSMASQGTTPRRLTDLIGSLSDLTSGSGDKGTPIIFIQGYFDNYTK >Mature_396_residues MERVVGTVVRGLRCPIINEGDCIENIVVDSVLKASKVEGFEINDKDVVTVTESVVARAQGNYATIDQIAKDVKSKFGDDT IGVIFPILSRNRFAICLRGIAKGAKKIVLMLSYPSDEVGNHLVDIDMLDEKGINPWSDVLTEKQFRDCFGEVKHTFTGVD YVEYYKSLIEEYGVECEVIFSNNPKTILNYTKNVLTCDIHTRFRTKKILKNNGGEKIYSLDNILSSSVDGGGFNENYGLL GSNKSTEDTVKLFPRNCKPVVDNIQAKLKEKTGKNVEVMIYGDGAFKDPVGKIWELADPVVSPAYTEGLEGTPNEVKLKY LADNDFAHLKGDELKKAISEYIKNKEDDLVGSMASQGTTPRRLTDLIGSLSDLTSGSGDKGTPIIFIQGYFDNYTK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43806; Mature: 43806
Theoretical pI: Translated: 5.03; Mature: 5.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MERVVGTVVRGLRCPIINEGDCIENIVVDSVLKASKVEGFEINDKDVVTVTESVVARAQG CCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCEECCCCCEEEHHHHHHHHCCC NYATIDQIAKDVKSKFGDDTIGVIFPILSRNRFAICLRGIAKGAKKIVLMLSYPSDEVGN CCHHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHHCCCEEEEEEEECCCHHHCC HLVDIDMLDEKGINPWSDVLTEKQFRDCFGEVKHTFTGVDYVEYYKSLIEEYGVECEVIF EEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCEEEEEE SNNPKTILNYTKNVLTCDIHTRFRTKKILKNNGGEKIYSLDNILSSSVDGGGFNENYGLL CCCCHHHHHCCCCEEEEEEHHHHHHHHHHHCCCCCEEHHHHHHHHCCCCCCCCCCCCCCC GSNKSTEDTVKLFPRNCKPVVDNIQAKLKEKTGKNVEVMIYGDGAFKDPVGKIWELADPV CCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHCHH VSPAYTEGLEGTPNEVKLKYLADNDFAHLKGDELKKAISEYIKNKEDDLVGSMASQGTTP CCCHHHCCCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHCCCCH RRLTDLIGSLSDLTSGSGDKGTPIIFIQGYFDNYTK HHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCC >Mature Secondary Structure MERVVGTVVRGLRCPIINEGDCIENIVVDSVLKASKVEGFEINDKDVVTVTESVVARAQG CCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCEECCCCCEEEHHHHHHHHCCC NYATIDQIAKDVKSKFGDDTIGVIFPILSRNRFAICLRGIAKGAKKIVLMLSYPSDEVGN CCHHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHHCCCEEEEEEEECCCHHHCC HLVDIDMLDEKGINPWSDVLTEKQFRDCFGEVKHTFTGVDYVEYYKSLIEEYGVECEVIF EEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCEEEEEE SNNPKTILNYTKNVLTCDIHTRFRTKKILKNNGGEKIYSLDNILSSSVDGGGFNENYGLL CCCCHHHHHCCCCEEEEEEHHHHHHHHHHHCCCCCEEHHHHHHHHCCCCCCCCCCCCCCC GSNKSTEDTVKLFPRNCKPVVDNIQAKLKEKTGKNVEVMIYGDGAFKDPVGKIWELADPV CCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHCHH VSPAYTEGLEGTPNEVKLKYLADNDFAHLKGDELKKAISEYIKNKEDDLVGSMASQGTTP CCCHHHCCCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHCCCCH RRLTDLIGSLSDLTSGSGDKGTPIIFIQGYFDNYTK HHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA