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The map label for this gene is 148378546

Identifier: 148378546

GI number: 148378546

Start: 641916

End: 642071

Strand: Reverse

Name: 148378546

Synonym: CBO0543A

Alternate gene names: NA

Gene position: 642071-641916 (Counterclockwise)

Preceding gene: 148378547

Following gene: 148378545

Centisome position: 16.52

GC content: 29.49

Gene sequence:

>156_bases
ATGAAGCAAATTGATTTAGCTGAAAAAATAGGAGTTCGTAGAGAAACGATAGTTCATCTTGAAAGTGGAAGATATAATCC
ATCCTTAAAAATGGCTATGGATATTGCTAAAGTATTTAATGCTACCGTTGAAGAATTATTTAAGTTTGAAGATTAA

Upstream 100 bases:

>100_bases
TTAGGGTTTATTCAAGATGAACTAATTATGGAATTTGGGTATCCATGTCAAAGATTTATTTTTAATGACAAATATAAAAG
AATATAGGGAAAAAACAAAT

Downstream 100 bases:

>100_bases
TCTTGCTTAAAATAAGTAAAACTTTATAATAAAAATTATACTTCAAACTAATTTTAAAAATACTTATGGCAACTAATTAT
ACATTAAATATTTTTATCGG

Product: DNA-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 51; Mature: 51

Protein sequence:

>51_residues
MKQIDLAEKIGVRRETIVHLESGRYNPSLKMAMDIAKVFNATVEELFKFED

Sequences:

>Translated_51_residues
MKQIDLAEKIGVRRETIVHLESGRYNPSLKMAMDIAKVFNATVEELFKFED
>Mature_51_residues
MKQIDLAEKIGVRRETIVHLESGRYNPSLKMAMDIAKVFNATVEELFKFED

Specific function: Unknown

COG id: COG1476

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH cro/C1-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001387
- InterPro:   IPR010982 [H]

Pfam domain/function: PF01381 HTH_3 [H]

EC number: NA

Molecular weight: Translated: 5913; Mature: 5913

Theoretical pI: Translated: 5.79; Mature: 5.79

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.9 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.9 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKQIDLAEKIGVRRETIVHLESGRYNPSLKMAMDIAKVFNATVEELFKFED
CCCCCCHHHHCCCHHHEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKQIDLAEKIGVRRETIVHLESGRYNPSLKMAMDIAKVFNATVEELFKFED
CCCCCCHHHHCCCHHHEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9389475 [H]