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The map label for this gene is hmu [H]

Identifier: 148361165

GI number: 148361165

Start: 3400428

End: 3401396

Strand: Reverse

Name: hmu [H]

Synonym: LPC_3139

Alternate gene names: 148361165

Gene position: 3401396-3400428 (Counterclockwise)

Preceding gene: 148361166

Following gene: 148361164

Centisome position: 95.1

GC content: 38.49

Gene sequence:

>969_bases
ATGTGGCGGGTTTTAACTATTGTGGCAGTTGCACTAATATCCAATCAGATTAAGGCACTTAGTTGGTCTGATTTATGGTT
TACTCCCAATCAACAAGCTCAACATTTGATGGAAAAGGGACAATTTGCAAAAGCTAAAGATCTTTTTGAGCGCAATGACT
GGGCTGCAAGCGCAGCATACAGAGCAGGAGATTATGAACAGGCAGCCAAATTATTCAATGAGTTAAAAACGGAACAAGGC
TACTATAACCAGGGAAATGCTTTAGCACACTTAGGGAAATATGAGGAAGCAATACGAGCATATGACAAAGCCTTGGCATT
TAATCCAAATAATCAGGATGCTTTATATAATCGAAAATTAATCAGTGAATTGTTGAAGAAAGATAAAGAAAAGAAAAAAA
GCCAGAATCAGCAGGATAAGGATCAACAAAACAAAGATCAACAGAATCAGGATCAGCAAAATCAGGACAAACAAAACAAA
GATCAACAGAATCAAGATCAGCAAAATCAGGACAAGCAAAACAAAGATCAACAGAACCAGGGTCAGCAAAATCAGGACAA
GCAAAACAAAGATCAACAGAACCAGGGTCAGCAAAATCAGGACAAGCAAAACAAAGATCAACAGAACCAGGATCAGCAAA
ATCAGGACAAGCAGAACAAAAACCAGCAGAACCAGGATCAGCAAAATCAGGACAAGCAGAACAAAAACCAGCAGAACCAG
GATCAGCAAAATCAGGACAAGCAAAACAAAAACCAGCAGAACCGGGATCAGCAAAATAAGGCACAGCAGAATAAAAATCA
AAATAAAAAAAATGACAAGCAAGAGGGAGAAATTCAATCCGAATCGAATCAGGAGAAACAACTTGCTAAAGAACAATGGT
TGCGATTAATACCTGATGATCCGGGTGGATTAATGAGAGAAAAATTTTTACGTGATCATTTACGTAGAGAGCGTGGGTGG
TATCAATGA

Upstream 100 bases:

>100_bases
TCCCATTATGGCGTGATGAAGGCCGCTGGTTCTTGATTCCCGCATTGCTTTTTTTATTACCCGTATTTCAGCGAGGTTGG
ATGCAAAGGGTGACGATATG

Downstream 100 bases:

>100_bases
AGAAATTAATGTTATGGGTTTTATTGAGTTTATTTTCATCATTATCTTTTGCAGAAATCAAAGTCGAACTTGAGCCTTCG
CAAGTCACAATGGGAGAAAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 322; Mature: 322

Protein sequence:

>322_residues
MWRVLTIVAVALISNQIKALSWSDLWFTPNQQAQHLMEKGQFAKAKDLFERNDWAASAAYRAGDYEQAAKLFNELKTEQG
YYNQGNALAHLGKYEEAIRAYDKALAFNPNNQDALYNRKLISELLKKDKEKKKSQNQQDKDQQNKDQQNQDQQNQDKQNK
DQQNQDQQNQDKQNKDQQNQGQQNQDKQNKDQQNQGQQNQDKQNKDQQNQDQQNQDKQNKNQQNQDQQNQDKQNKNQQNQ
DQQNQDKQNKNQQNRDQQNKAQQNKNQNKKNDKQEGEIQSESNQEKQLAKEQWLRLIPDDPGGLMREKFLRDHLRRERGW
YQ

Sequences:

>Translated_322_residues
MWRVLTIVAVALISNQIKALSWSDLWFTPNQQAQHLMEKGQFAKAKDLFERNDWAASAAYRAGDYEQAAKLFNELKTEQG
YYNQGNALAHLGKYEEAIRAYDKALAFNPNNQDALYNRKLISELLKKDKEKKKSQNQQDKDQQNKDQQNQDQQNQDKQNK
DQQNQDQQNQDKQNKDQQNQGQQNQDKQNKDQQNQGQQNQDKQNKDQQNQDQQNQDKQNKNQQNQDQQNQDKQNKNQQNQ
DQQNQDKQNKNQQNRDQQNKAQQNKNQNKKNDKQEGEIQSESNQEKQLAKEQWLRLIPDDPGGLMREKFLRDHLRRERGW
YQ
>Mature_322_residues
MWRVLTIVAVALISNQIKALSWSDLWFTPNQQAQHLMEKGQFAKAKDLFERNDWAASAAYRAGDYEQAAKLFNELKTEQG
YYNQGNALAHLGKYEEAIRAYDKALAFNPNNQDALYNRKLISELLKKDKEKKKSQNQQDKDQQNKDQQNQDQQNQDKQNK
DQQNQDQQNQDKQNKDQQNQGQQNQDKQNKDQQNQGQQNQDKQNKDQQNQDQQNQDKQNKNQQNQDQQNQDKQNKNQQNQ
DQQNQDKQNKNQQNRDQQNKAQQNKNQNKKNDKQEGEIQSESNQEKQLAKEQWLRLIPDDPGGLMREKFLRDHLRRERGW
YQ

Specific function: May protect the organism from dessication stress. May also contribute to the rigidity and maintenance of the unique square cell morphology of H.walsbyi [H]

COG id: COG0457

COG function: function code R; FOG: TPR repeat

Gene ontology:

Cell location: Secreted (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 cadherin domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001304
- InterPro:   IPR016186
- InterPro:   IPR016187
- InterPro:   IPR002126
- InterPro:   IPR015919
- InterPro:   IPR013784
- InterPro:   IPR014766
- InterPro:   IPR008979
- InterPro:   IPR011493
- InterPro:   IPR006626
- InterPro:   IPR022409 [H]

Pfam domain/function: PF07581 Glug [H]

EC number: NA

Molecular weight: Translated: 38326; Mature: 38326

Theoretical pI: Translated: 9.45; Mature: 9.45

Prosite motif: PS50005 TPR ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
0.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MWRVLTIVAVALISNQIKALSWSDLWFTPNQQAQHLMEKGQFAKAKDLFERNDWAASAAY
CHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
RAGDYEQAAKLFNELKTEQGYYNQGNALAHLGKYEEAIRAYDKALAFNPNNQDALYNRKL
HCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH
ISELLKKDKEKKKSQNQQDKDQQNKDQQNQDQQNQDKQNKDQQNQDQQNQDKQNKDQQNQ
HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GQQNQDKQNKDQQNQGQQNQDKQNKDQQNQDQQNQDKQNKNQQNQDQQNQDKQNKNQQNQ
CCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DQQNQDKQNKNQQNRDQQNKAQQNKNQNKKNDKQEGEIQSESNQEKQLAKEQWLRLIPDD
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCHHHHCHHHHHHHHHHHHHHCCCC
PGGLMREKFLRDHLRRERGWYQ
CCHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MWRVLTIVAVALISNQIKALSWSDLWFTPNQQAQHLMEKGQFAKAKDLFERNDWAASAAY
CHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
RAGDYEQAAKLFNELKTEQGYYNQGNALAHLGKYEEAIRAYDKALAFNPNNQDALYNRKL
HCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH
ISELLKKDKEKKKSQNQQDKDQQNKDQQNQDQQNQDKQNKDQQNQDQQNQDKQNKDQQNQ
HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GQQNQDKQNKDQQNQGQQNQDKQNKDQQNQDQQNQDKQNKNQQNQDQQNQDKQNKNQQNQ
CCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DQQNQDKQNKNQQNRDQQNKAQQNKNQNKKNDKQEGEIQSESNQEKQLAKEQWLRLIPDD
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCHHHHCHHHHHHHHHHHHHHCCCC
PGGLMREKFLRDHLRRERGWYQ
CCHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA