Definition | Legionella pneumophila str. Corby chromosome, complete genome. |
---|---|
Accession | NC_009494 |
Length | 3,576,470 |
Click here to switch to the map view.
The map label for this gene is 148360994
Identifier: 148360994
GI number: 148360994
Start: 485924
End: 486943
Strand: Reverse
Name: 148360994
Synonym: LPC_2954
Alternate gene names: NA
Gene position: 486943-485924 (Counterclockwise)
Preceding gene: 148360993
Following gene: 148360995
Centisome position: 13.62
GC content: 38.53
Gene sequence:
>1020_bases ATGCCTATCAGTAATGCCTTTCTTAAGTTATTCAGTGAATTTGTTGATAATTATGCGCGCAATGGCACCCCTTCATTTTA TCATTGGGCAAAGGAACAAAACCATGAAGTCATTAACAAATTTTTCCATGAGCTTTTGGAAATTATTAAATCAAACACAG AAACATTTCATGATGTCAGTATCATAGAGCACCTTAATGCTACAGTACTATTATCAGCAAAGACCAATCCCTACTTACTC GATTGTTGGATTTCATTTATTACTAAATACAATGCTGAAACCAACAGTTTTACCCCAATAGGGGCTTCGATGCACATTAA AATTGGGCCAGAAGGCACGCCATCCGAACGGATAATAAGGGAGCTCAAAGAAAGTCTGGTCATGACGCAACAAGCGTTTA TTTTAGCCCAAAAGGCTAATGCTACGGAAGTTGACTCTTTAAAAAGACAACTTGAGCGAACAAAGCTAGAAAACGAGCGC TTAGTCACACAAAATCAGTTTCTAAAGGATCAAGTCAGGGCAGAAAAAACATTTGCAGACATTAACCCACAGATTAACAA TGCCCGGCATCAACTCAGTGCTTTAACAGAATTAATACAAACTCTAAGCGAAATCACAAATGCCAAACCCAAAATAGAAA CTGTATCTTCGTTATCCATTCCAGCTGTTACAGAAAATAAGTCTGAACTTCTAAAGGAAAATTCATGCTCTGTCGCCCCT GTATCCAAGGAAGTTACTCCTGCAATCAGTCAAGAACCGAAAAAAAGACCAGTTCCACCGCCCCCCAATGATATGGATAG TCAAGCATTATTCCCCAATATACCCCCTAAAGAAGATGTGTCTATAAAAGTTACAATACCGTCCATGCCCAAACCAAATT CAACCCAGCCCGTTGCAAAAAATTCAGGCTTCTTTTCAGGCGATGGTTTTTTAAAAGAATTAAATGCAAAAATTAAAGAA AGAAAGGAACGCCCAAAAGATGAGCCACATACCACTCCCGTCGAAAAAAAAAATCTCTAG
Upstream 100 bases:
>100_bases AATGAATAATTATTTTTTAACTTCACAACAGCTATTGAACTTTAATTTAAGTTGATATTAAATGAAACACTATGATTCCA TGGATCAGGAGTTAATTACC
Downstream 100 bases:
>100_bases TTAAGCCAACTTCTGTTCCTCCTGAATATAGGGCGCTCTTAGCTAAAATGGAGGAAATTAGAAATGCAGTAACAGGGAAA TATCCTCATGCCGATGACTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 339; Mature: 338
Protein sequence:
>339_residues MPISNAFLKLFSEFVDNYARNGTPSFYHWAKEQNHEVINKFFHELLEIIKSNTETFHDVSIIEHLNATVLLSAKTNPYLL DCWISFITKYNAETNSFTPIGASMHIKIGPEGTPSERIIRELKESLVMTQQAFILAQKANATEVDSLKRQLERTKLENER LVTQNQFLKDQVRAEKTFADINPQINNARHQLSALTELIQTLSEITNAKPKIETVSSLSIPAVTENKSELLKENSCSVAP VSKEVTPAISQEPKKRPVPPPPNDMDSQALFPNIPPKEDVSIKVTIPSMPKPNSTQPVAKNSGFFSGDGFLKELNAKIKE RKERPKDEPHTTPVEKKNL
Sequences:
>Translated_339_residues MPISNAFLKLFSEFVDNYARNGTPSFYHWAKEQNHEVINKFFHELLEIIKSNTETFHDVSIIEHLNATVLLSAKTNPYLL DCWISFITKYNAETNSFTPIGASMHIKIGPEGTPSERIIRELKESLVMTQQAFILAQKANATEVDSLKRQLERTKLENER LVTQNQFLKDQVRAEKTFADINPQINNARHQLSALTELIQTLSEITNAKPKIETVSSLSIPAVTENKSELLKENSCSVAP VSKEVTPAISQEPKKRPVPPPPNDMDSQALFPNIPPKEDVSIKVTIPSMPKPNSTQPVAKNSGFFSGDGFLKELNAKIKE RKERPKDEPHTTPVEKKNL >Mature_338_residues PISNAFLKLFSEFVDNYARNGTPSFYHWAKEQNHEVINKFFHELLEIIKSNTETFHDVSIIEHLNATVLLSAKTNPYLLD CWISFITKYNAETNSFTPIGASMHIKIGPEGTPSERIIRELKESLVMTQQAFILAQKANATEVDSLKRQLERTKLENERL VTQNQFLKDQVRAEKTFADINPQINNARHQLSALTELIQTLSEITNAKPKIETVSSLSIPAVTENKSELLKENSCSVAPV SKEVTPAISQEPKKRPVPPPPNDMDSQALFPNIPPKEDVSIKVTIPSMPKPNSTQPVAKNSGFFSGDGFLKELNAKIKER KERPKDEPHTTPVEKKNL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38196; Mature: 38065
Theoretical pI: Translated: 7.73; Mature: 7.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPISNAFLKLFSEFVDNYARNGTPSFYHWAKEQNHEVINKFFHELLEIIKSNTETFHDVS CCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCHHHHHH IIEHLNATVLLSAKTNPYLLDCWISFITKYNAETNSFTPIGASMHIKIGPEGTPSERIIR HHHHCCCEEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCHHHHHH ELKESLVMTQQAFILAQKANATEVDSLKRQLERTKLENERLVTQNQFLKDQVRAEKTFAD HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH INPQINNARHQLSALTELIQTLSEITNAKPKIETVSSLSIPAVTENKSELLKENSCSVAP CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCCCCCHHHHHHCCCCCCCC VSKEVTPAISQEPKKRPVPPPPNDMDSQALFPNIPPKEDVSIKVTIPSMPKPNSTQPVAK CCHHCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCC NSGFFSGDGFLKELNAKIKERKERPKDEPHTTPVEKKNL CCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC >Mature Secondary Structure PISNAFLKLFSEFVDNYARNGTPSFYHWAKEQNHEVINKFFHELLEIIKSNTETFHDVS CCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCHHHHHH IIEHLNATVLLSAKTNPYLLDCWISFITKYNAETNSFTPIGASMHIKIGPEGTPSERIIR HHHHCCCEEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCHHHHHH ELKESLVMTQQAFILAQKANATEVDSLKRQLERTKLENERLVTQNQFLKDQVRAEKTFAD HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH INPQINNARHQLSALTELIQTLSEITNAKPKIETVSSLSIPAVTENKSELLKENSCSVAP CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCCCCCHHHHHHCCCCCCCC VSKEVTPAISQEPKKRPVPPPPNDMDSQALFPNIPPKEDVSIKVTIPSMPKPNSTQPVAK CCHHCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCC NSGFFSGDGFLKELNAKIKERKERPKDEPHTTPVEKKNL CCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA