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The map label for this gene is 148360993

Identifier: 148360993

GI number: 148360993

Start: 487069

End: 487707

Strand: Reverse

Name: 148360993

Synonym: LPC_2953

Alternate gene names: NA

Gene position: 487707-487069 (Counterclockwise)

Preceding gene: 148360992

Following gene: 148360994

Centisome position: 13.64

GC content: 36.78

Gene sequence:

>639_bases
TTGTTTAATCCGGACTTAATTGCCCATAATATTTGTACTCAAGGATTTCATATCATTGATGAATTTCTGGAAGAGGCACA
CTACTACTCTTTACGAGACATGGCTTATGAATTAAAACAGCAAAATTTATTCAGAAATGCCAAAATTGGCCAGAACTTAC
AAGCGCAGCAAAATGACAAGATTAGAAGCGATCAAATTTTCTGGATAGATGCAGACTCCCCTTATCCACCCATTCAAGCT
TACTTAAAAAAACTTATCTCTTTGGGCAATGTTCTGAATCAAACCATGTATCTTGGTTTAGCAGAGTTTGAAACTCATTT
TGCAATTTATCTCCCTGGAACCTTTTATAGAAAGCACATTGATCAATTTGAAAGTACAAAAACCAGGAAAATATCATTTG
TCTATTATTTGAATGATACTTGGCAAAAAGAATTTGGTGGCGAATTGTTACTCTACAATATTGAAGATGAGCTTATTCAA
AACATTTCTCCATTGGGAAATCGGTTCGTCTGTTTTGATAGTCAATTACCGCACGAAGTTCACCCAACTCAACGAACGCG
CTTCAGTATGACAGGCTGGATGAAAACACGCTCAACCTCCGTACTGGCCGACAATAAACTGACCCAAATAACTCAGTAG

Upstream 100 bases:

>100_bases
ACGTTTGCAAGGTAATCATCGAATTCATTACCTCATTATTTCCAAAAAATAATTCTTGGCGTACAATGCATTATCACTTT
GCCTGATTGGTGTAGACAGG

Downstream 100 bases:

>100_bases
CACTTTATCCGCTGTTCTATAAAAAAATGAATAATTATTTTTTAACTTCACAACAGCTATTGAACTTTAATTTAAGTTGA
TATTAAATGAAACACTATGA

Product: SM20-related protein

Products: NA

Alternate protein names: 2OG-Fe(II) Oxygenase Family Oxidoreductase; Prolyl 4-Hydroxylase Alpha Subunit; Proline Hydroxylase; Oxidoreductase; SM-20 Domain-Containing Protein; Oxidoreductase 2OG-Fe(II) Oxygenase Family; 2OG-Fe(II) Oxygenase Superfamily Protein; Oxygenase; SM-20-Related Protein; SM-20-Like Protein; 2OG-Fe(II) Oxygenase Family Protein; SM-20 Domain Protein; Egl Nine-Like Protein; Oxidoreductase 2OG-Fe(II) Oxygenase Family Protein; 2OG-Fe(II) Oxygenase Family; 2og-Fe(Ii) Oxygenase; Prolyl 4-Hydroxylase Alpha Subunit Homologue

Number of amino acids: Translated: 212; Mature: 212

Protein sequence:

>212_residues
MFNPDLIAHNICTQGFHIIDEFLEEAHYYSLRDMAYELKQQNLFRNAKIGQNLQAQQNDKIRSDQIFWIDADSPYPPIQA
YLKKLISLGNVLNQTMYLGLAEFETHFAIYLPGTFYRKHIDQFESTKTRKISFVYYLNDTWQKEFGGELLLYNIEDELIQ
NISPLGNRFVCFDSQLPHEVHPTQRTRFSMTGWMKTRSTSVLADNKLTQITQ

Sequences:

>Translated_212_residues
MFNPDLIAHNICTQGFHIIDEFLEEAHYYSLRDMAYELKQQNLFRNAKIGQNLQAQQNDKIRSDQIFWIDADSPYPPIQA
YLKKLISLGNVLNQTMYLGLAEFETHFAIYLPGTFYRKHIDQFESTKTRKISFVYYLNDTWQKEFGGELLLYNIEDELIQ
NISPLGNRFVCFDSQLPHEVHPTQRTRFSMTGWMKTRSTSVLADNKLTQITQ
>Mature_212_residues
MFNPDLIAHNICTQGFHIIDEFLEEAHYYSLRDMAYELKQQNLFRNAKIGQNLQAQQNDKIRSDQIFWIDADSPYPPIQA
YLKKLISLGNVLNQTMYLGLAEFETHFAIYLPGTFYRKHIDQFESTKTRKISFVYYLNDTWQKEFGGELLLYNIEDELIQ
NISPLGNRFVCFDSQLPHEVHPTQRTRFSMTGWMKTRSTSVLADNKLTQITQ

Specific function: Unknown

COG id: COG3751

COG function: function code O; Predicted proline hydroxylase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Caenorhabditis elegans, GI71991009, Length=198, Percent_Identity=31.3131313131313, Blast_Score=73, Evalue=9e-14,
Organism=Caenorhabditis elegans, GI71991012, Length=198, Percent_Identity=31.3131313131313, Blast_Score=72, Evalue=1e-13,
Organism=Caenorhabditis elegans, GI25152823, Length=198, Percent_Identity=31.3131313131313, Blast_Score=72, Evalue=2e-13,
Organism=Caenorhabditis elegans, GI115533166, Length=198, Percent_Identity=31.3131313131313, Blast_Score=72, Evalue=2e-13,
Organism=Drosophila melanogaster, GI24644170, Length=195, Percent_Identity=27.1794871794872, Blast_Score=70, Evalue=7e-13,
Organism=Drosophila melanogaster, GI21356463, Length=195, Percent_Identity=27.1794871794872, Blast_Score=70, Evalue=1e-12,
Organism=Drosophila melanogaster, GI24644165, Length=195, Percent_Identity=27.1794871794872, Blast_Score=70, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24946; Mature: 24946

Theoretical pI: Translated: 6.39; Mature: 6.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFNPDLIAHNICTQGFHIIDEFLEEAHYYSLRDMAYELKQQNLFRNAKIGQNLQAQQNDK
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
IRSDQIFWIDADSPYPPIQAYLKKLISLGNVLNQTMYLGLAEFETHFAIYLPGTFYRKHI
CCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCHHHHHHH
DQFESTKTRKISFVYYLNDTWQKEFGGELLLYNIEDELIQNISPLGNRFVCFDSQLPHEV
HHHHCCCCEEEEEEEEECCCHHHHCCCCEEEEECHHHHHHHHCCCCCEEEEECCCCCCCC
HPTQRTRFSMTGWMKTRSTSVLADNKLTQITQ
CCCCHHEEEHHHHHHCCCCEEEECCCHHHCCC
>Mature Secondary Structure
MFNPDLIAHNICTQGFHIIDEFLEEAHYYSLRDMAYELKQQNLFRNAKIGQNLQAQQNDK
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
IRSDQIFWIDADSPYPPIQAYLKKLISLGNVLNQTMYLGLAEFETHFAIYLPGTFYRKHI
CCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCHHHHHHH
DQFESTKTRKISFVYYLNDTWQKEFGGELLLYNIEDELIQNISPLGNRFVCFDSQLPHEV
HHHHCCCCEEEEEEEEECCCHHHHCCCCEEEEECHHHHHHHHCCCCCEEEEECCCCCCCC
HPTQRTRFSMTGWMKTRSTSVLADNKLTQITQ
CCCCHHEEEHHHHHHCCCCEEEECCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA