Click here to switch to the map view.

The map label for this gene is 148360884

Identifier: 148360884

GI number: 148360884

Start: 593593

End: 593889

Strand: Reverse

Name: 148360884

Synonym: LPC_2844

Alternate gene names: NA

Gene position: 593889-593593 (Counterclockwise)

Preceding gene: 148360883

Following gene: 148360885

Centisome position: 16.61

GC content: 37.71

Gene sequence:

>297_bases
ATGAGTAGGGATACTAAGAACCTGATCCTCAAAGCAATTATTTTATTTGTCAGCTTAACTGCTCTTGTTAACCATGCCAT
GGCGTTCAATCTATTAGGGATAGGACCAAATCCAAAAAATCTACCCAAAGACAATGATGTAAGAGCTACTTTTAATCATT
GTAAGTCCTGTGATAAATCAACTACTCCTCCTTTAATTATTACAACTCCTGTACCCATTATTTATTACCCTGGGTGTCGA
CCGATCCAGTCATGCGATGCTTATGGTCACTGCGAACAAAAAGAAGATTGCTACTAA

Upstream 100 bases:

>100_bases
TTGCAAGATAATCCTTTGGTATAGTAGCAGAACCATAACAAGAAACTATACTCTTATTATCGCATAATACGGGGCATAAA
ATTAAAAAGGAGTTCACATC

Downstream 100 bases:

>100_bases
ATTTAATAACAGCGAACTCTTACTGAAACTATATACCTCTTACTGCCGCGAAGGTATAATTATCATTTTAGCCCTTTCAT
TGTACAATTTAGGATTTAGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 98; Mature: 97

Protein sequence:

>98_residues
MSRDTKNLILKAIILFVSLTALVNHAMAFNLLGIGPNPKNLPKDNDVRATFNHCKSCDKSTTPPLIITTPVPIIYYPGCR
PIQSCDAYGHCEQKEDCY

Sequences:

>Translated_98_residues
MSRDTKNLILKAIILFVSLTALVNHAMAFNLLGIGPNPKNLPKDNDVRATFNHCKSCDKSTTPPLIITTPVPIIYYPGCR
PIQSCDAYGHCEQKEDCY
>Mature_97_residues
SRDTKNLILKAIILFVSLTALVNHAMAFNLLGIGPNPKNLPKDNDVRATFNHCKSCDKSTTPPLIITTPVPIIYYPGCRP
IQSCDAYGHCEQKEDCY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10880; Mature: 10749

Theoretical pI: Translated: 8.12; Mature: 8.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

6.1 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
8.2 %Cys+Met (Translated Protein)
6.2 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
7.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRDTKNLILKAIILFVSLTALVNHAMAFNLLGIGPNPKNLPKDNDVRATFNHCKSCDKS
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCHHHHHHHHHCCCCC
TTPPLIITTPVPIIYYPGCRPIQSCDAYGHCEQKEDCY
CCCCEEEECCCCEEECCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
SRDTKNLILKAIILFVSLTALVNHAMAFNLLGIGPNPKNLPKDNDVRATFNHCKSCDKS
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCHHHHHHHHHCCCCC
TTPPLIITTPVPIIYYPGCRPIQSCDAYGHCEQKEDCY
CCCCEEEECCCCEEECCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA