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The map label for this gene is yuxH [H]

Identifier: 148360817

GI number: 148360817

Start: 658299

End: 659438

Strand: Reverse

Name: yuxH [H]

Synonym: LPC_2775

Alternate gene names: 148360817

Gene position: 659438-658299 (Counterclockwise)

Preceding gene: 148360806

Following gene: 148360818

Centisome position: 18.44

GC content: 35.44

Gene sequence:

>1140_bases
ATGATCGCCAAAAGACCAATATATAATCAACAATTAAAATGTGTCGCCTTTGAAATATTATCCTGTCGCAATGTAATACT
TAATGAAGAATTAACAAGGCAATTTTATGAGCTCATTTACCACACAGACACCCAATTACCTCTATTTGTTCCTTTTTCCC
TAAAAAAATTGCTTGAGCAATTTGAGACGCCAATCAACAACCCCATTATTTTAAAATTACCCGCAGATGAAATCGAATCG
GTTTATTCACTAACTGAGCTACAAGACTCTCTATTTTCTATTGCCTTACTGATTAATACCCCTCAACAATTGGCTTGGCT
AAATTTTGCCGAATACATAGGATTGACTGAGCAGTTAATGAATAAATCGGATGTAACCAAGGTAGTACAATACAGTAAGG
CAAAAAATCGTAAAATCATTGCTTATGATCTAAATCAACACGTTAATTTTGAAAAATGTAGGGCTATGACGATGGATTAT
TACTGTGGCGATTTCCTGCTTAACTACATTGCAGAGGAGCACACAGAAATAGCAGCAAACAAATTAAATGTACTTCAACT
CATCCAGGAATTACAAAAAGAAGATTGCGATTTAAACACGATTACTCATATCATCCAAGAAGATCCATTACTAAGCTATC
AACTTCTAAAACTGGTCAATTCAGTTGGATTTTCTAGTGGACCAAGCATAGAATCCATCGATCAAGCCGTTGCCAGGCTT
GGCACCATTAACCTGAAAAAATGGGTTATGCTGTTTTCAATGAAAAATATCTCAGATAAACCTGTAGAAATATTGGAGTC
AGGTCTAATCAGAGCTCATATGGCGGAAGAGCTCGCTAAAAAAAGTTCGAATATTTTCAGCCAAAGTGCCTATACTGCAG
GATTATTATCCATATTAGACTGCTTATTAAACAAACCCATGCCAGCATTGGTAGAACAAATCACCCTAGCTGAGGAGATA
AAAAATGCTCTGACAAATAAATCAGGACCATTAGGAAATCTATTGTCTTTGGTAATTGCTTATGAAGAAGGGCATTGGGA
AGAAGTAACTCAACTTAACATCAATGGAATTGATTTAAGTCAATTATATATTGACAGTTTAGCCTTGGTAAGCCAAGGTA
CAAAAATCATGAGTAACTGA

Upstream 100 bases:

>100_bases
TTATCACGCAAAGTTCAGTTTATAAGGAAAATGAATAGTCCATTGGCCAATTACAAAAACCCGTACTATGATTACATAAT
ATGATCAAAAGGAGATCTTT

Downstream 100 bases:

>100_bases
TTGCGCAACAATTTAAACAATATTCTTTTTATTTTTCTATGCCTGACCCAGGCTTCTATTTGAGCAACAAAAAATTTAGA
ATGTGTTTTCCTAAATGATT

Product: signal transduction protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 379; Mature: 379

Protein sequence:

>379_residues
MIAKRPIYNQQLKCVAFEILSCRNVILNEELTRQFYELIYHTDTQLPLFVPFSLKKLLEQFETPINNPIILKLPADEIES
VYSLTELQDSLFSIALLINTPQQLAWLNFAEYIGLTEQLMNKSDVTKVVQYSKAKNRKIIAYDLNQHVNFEKCRAMTMDY
YCGDFLLNYIAEEHTEIAANKLNVLQLIQELQKEDCDLNTITHIIQEDPLLSYQLLKLVNSVGFSSGPSIESIDQAVARL
GTINLKKWVMLFSMKNISDKPVEILESGLIRAHMAEELAKKSSNIFSQSAYTAGLLSILDCLLNKPMPALVEQITLAEEI
KNALTNKSGPLGNLLSLVIAYEEGHWEEVTQLNINGIDLSQLYIDSLALVSQGTKIMSN

Sequences:

>Translated_379_residues
MIAKRPIYNQQLKCVAFEILSCRNVILNEELTRQFYELIYHTDTQLPLFVPFSLKKLLEQFETPINNPIILKLPADEIES
VYSLTELQDSLFSIALLINTPQQLAWLNFAEYIGLTEQLMNKSDVTKVVQYSKAKNRKIIAYDLNQHVNFEKCRAMTMDY
YCGDFLLNYIAEEHTEIAANKLNVLQLIQELQKEDCDLNTITHIIQEDPLLSYQLLKLVNSVGFSSGPSIESIDQAVARL
GTINLKKWVMLFSMKNISDKPVEILESGLIRAHMAEELAKKSSNIFSQSAYTAGLLSILDCLLNKPMPALVEQITLAEEI
KNALTNKSGPLGNLLSLVIAYEEGHWEEVTQLNINGIDLSQLYIDSLALVSQGTKIMSN
>Mature_379_residues
MIAKRPIYNQQLKCVAFEILSCRNVILNEELTRQFYELIYHTDTQLPLFVPFSLKKLLEQFETPINNPIILKLPADEIES
VYSLTELQDSLFSIALLINTPQQLAWLNFAEYIGLTEQLMNKSDVTKVVQYSKAKNRKIIAYDLNQHVNFEKCRAMTMDY
YCGDFLLNYIAEEHTEIAANKLNVLQLIQELQKEDCDLNTITHIIQEDPLLSYQLLKLVNSVGFSSGPSIESIDQAVARL
GTINLKKWVMLFSMKNISDKPVEILESGLIRAHMAEELAKKSSNIFSQSAYTAGLLSILDCLLNKPMPALVEQITLAEEI
KNALTNKSGPLGNLLSLVIAYEEGHWEEVTQLNINGIDLSQLYIDSLALVSQGTKIMSN

Specific function: Unknown

COG id: COG3434

COG function: function code T; Predicted signal transduction protein containing EAL and modified HD-GYP domains

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 EAL domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014408
- InterPro:   IPR001633
- InterPro:   IPR013976 [H]

Pfam domain/function: PF00563 EAL; PF08668 HDOD [H]

EC number: NA

Molecular weight: Translated: 42911; Mature: 42911

Theoretical pI: Translated: 4.70; Mature: 4.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIAKRPIYNQQLKCVAFEILSCRNVILNEELTRQFYELIYHTDTQLPLFVPFSLKKLLEQ
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECHHHHHHHHH
FETPINNPIILKLPADEIESVYSLTELQDSLFSIALLINTPQQLAWLNFAEYIGLTEQLM
HCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHEECCHHHHHHHHHHHHHHHHHHHH
NKSDVTKVVQYSKAKNRKIIAYDLNQHVNFEKCRAMTMDYYCGDFLLNYIAEEHTEIAAN
CHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KLNVLQLIQELQKEDCDLNTITHIIQEDPLLSYQLLKLVNSVGFSSGPSIESIDQAVARL
HHHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHH
GTINLKKWVMLFSMKNISDKPVEILESGLIRAHMAEELAKKSSNIFSQSAYTAGLLSILD
CCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
CLLNKPMPALVEQITLAEEIKNALTNKSGPLGNLLSLVIAYEEGHWEEVTQLNINGIDLS
HHHCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCHHHHHEECCCCCCHH
QLYIDSLALVSQGTKIMSN
HHHHHHHHHHHCCCHHHCC
>Mature Secondary Structure
MIAKRPIYNQQLKCVAFEILSCRNVILNEELTRQFYELIYHTDTQLPLFVPFSLKKLLEQ
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECHHHHHHHHH
FETPINNPIILKLPADEIESVYSLTELQDSLFSIALLINTPQQLAWLNFAEYIGLTEQLM
HCCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHEECCHHHHHHHHHHHHHHHHHHHH
NKSDVTKVVQYSKAKNRKIIAYDLNQHVNFEKCRAMTMDYYCGDFLLNYIAEEHTEIAAN
CHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KLNVLQLIQELQKEDCDLNTITHIIQEDPLLSYQLLKLVNSVGFSSGPSIESIDQAVARL
HHHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHH
GTINLKKWVMLFSMKNISDKPVEILESGLIRAHMAEELAKKSSNIFSQSAYTAGLLSILD
CCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
CLLNKPMPALVEQITLAEEIKNALTNKSGPLGNLLSLVIAYEEGHWEEVTQLNINGIDLS
HHHCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCHHHHHEECCCCCCHH
QLYIDSLALVSQGTKIMSN
HHHHHHHHHHHCCCHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 2507523; 9274030; 9384377; 1943994 [H]