Click here to switch to the map view.

The map label for this gene is 148360678

Identifier: 148360678

GI number: 148360678

Start: 829086

End: 829340

Strand: Reverse

Name: 148360678

Synonym: LPC_2624

Alternate gene names: NA

Gene position: 829340-829086 (Counterclockwise)

Preceding gene: 148360672

Following gene: 148360679

Centisome position: 23.19

GC content: 40.78

Gene sequence:

>255_bases
ATGAATAATATTTCTAAAATAACAATGGCTGCCGTGATGGCTGCTGGACTTTCAATGGCTACCATACCTGCTAATGCAGA
TACTCCAAATGATATGGAAAAATGCCAAGGTGTGGCCAAAGCTGGAAAAAATGATTGTGGTACAGCTCAACATGCCTGTG
CTGGTCAATCTAAAACAGATGGTTCAACAACTGACTGGATTTATCTGCCCAAAGGTACTTGTGAAAAGCTGGTTAACGGC
ACAGTTAAAAGCTAA

Upstream 100 bases:

>100_bases
AGCTGTGTTTGCATGCAGGAATACAATGAAAAAGCCCGGTTAGGCAAGGGGTTTATTAAATAACATATGGATTAATTACA
TATAACAAAGGATAGGTATC

Downstream 100 bases:

>100_bases
TTAGAATGTATTCAAATCATTCTACCGATCAAGCCGCGCCTTATTCTGGATGTTCAGGCATTGGATTGCGGCTTGAACAC
ATCGACGATATTTTAAAGGA

Product: hypothetical protein

Products: NA

Alternate protein names: Integral Membrane Protein

Number of amino acids: Translated: 84; Mature: 84

Protein sequence:

>84_residues
MNNISKITMAAVMAAGLSMATIPANADTPNDMEKCQGVAKAGKNDCGTAQHACAGQSKTDGSTTDWIYLPKGTCEKLVNG
TVKS

Sequences:

>Translated_84_residues
MNNISKITMAAVMAAGLSMATIPANADTPNDMEKCQGVAKAGKNDCGTAQHACAGQSKTDGSTTDWIYLPKGTCEKLVNG
TVKS
>Mature_84_residues
MNNISKITMAAVMAAGLSMATIPANADTPNDMEKCQGVAKAGKNDCGTAQHACAGQSKTDGSTTDWIYLPKGTCEKLVNG
TVKS

Specific function: Unknown

COG id: COG5572

COG function: function code S; Predicted integral membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 8636; Mature: 8636

Theoretical pI: Translated: 7.93; Mature: 7.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.8 %Cys     (Translated Protein)
6.0 %Met     (Translated Protein)
10.7 %Cys+Met (Translated Protein)
4.8 %Cys     (Mature Protein)
6.0 %Met     (Mature Protein)
10.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNNISKITMAAVMAAGLSMATIPANADTPNDMEKCQGVAKAGKNDCGTAQHACAGQSKTD
CCCHHHHHHHHHHHHCCCCEECCCCCCCCCHHHHHHHHHHCCCCCCCCCHHHHCCCCCCC
GSTTDWIYLPKGTCEKLVNGTVKS
CCCCCEEEECCHHHHHHHCCCCCC
>Mature Secondary Structure
MNNISKITMAAVMAAGLSMATIPANADTPNDMEKCQGVAKAGKNDCGTAQHACAGQSKTD
CCCHHHHHHHHHHHHCCCCEECCCCCCCCCHHHHHHHHHHCCCCCCCCCHHHHCCCCCCC
GSTTDWIYLPKGTCEKLVNGTVKS
CCCCCEEEECCHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA