Definition | Legionella pneumophila str. Corby chromosome, complete genome. |
---|---|
Accession | NC_009494 |
Length | 3,576,470 |
Click here to switch to the map view.
The map label for this gene is artJ [H]
Identifier: 148360669
GI number: 148360669
Start: 837920
End: 838672
Strand: Reverse
Name: artJ [H]
Synonym: LPC_2615
Alternate gene names: 148360669
Gene position: 838672-837920 (Counterclockwise)
Preceding gene: 148360663
Following gene: 148360671
Centisome position: 23.45
GC content: 37.85
Gene sequence:
>753_bases ATGAAATTTATTCAGGGATTATTGCTTTCTTTCTTTTTTCTAGTTTCACCTCTCCACGCTCAAAACGAGCCTATACCTTT AATAATAGGTGTAGGAGGCTTTTACCCCCCCTTTATTATGCAAGGAACCAATAATGAGCTTTTTGGCTATGATATCGCCA CCATGACAGAACTGTGTAAGATAATGAAACGCCAATGTAATTTTCGAGTCATGAGATTCAGACAATTAATTCCTGCTCTG ATTAACAAACAAATTGATGCGGCGATCAGCGCCATGTCTATTACTTCAGAACGTTCAAACCTGGTTAATTTTAGCATGCC CTATTTATTGAGTTACTCCAGGTTTCTTACAAATGAGGTACACAATACTCATCAACCGTTTAATTTAATGCTCTTAAAAG GTAAACGAATTGGAGTGGAACAAAATACTGTCTTTAGTCAGGAAATCAGAAGGATGGGGATAATAGACCCTGTCATAGTG GAATTTGACAGAACTGAAGAAATGCTTGAGGCGTTGAGCGCAAATAAAATTGACTTTGTTCTGATGGATAATCCTGCCGC TTTATACTGGTCCGCTAATTCGTCGGGGAGACTTCTGGTAATAGGCAGTCCCATGTTGATTGGTTATGGTTTGGGAATTG CAGTCAATCGGGAAAACTCCGTATTACTCAAATCTCTAAATGATGCCTTGGTAGAATACCAGCGTTCTGACAAATACAAG GAAAATTACAATAAATACATGATGAATTTTTAA
Upstream 100 bases:
>100_bases CATAGGATTAATCAATTAATTTTACATTTAATACTTTAAAACTCCTATTGGACGTTATACTCTTATAAAAGACTCTAATA ATATTTTAGTGAAGATACCA
Downstream 100 bases:
>100_bases GAGTGATATGGTTACAAAAATTGCTCTTAATCACTCATCAATAGCTGAATAACCGTTTTAAGGCGTAATAAGTCAGCGCC CTGATATTTAACTATCCTGT
Product: arginine ABC transporter, periplasmic binding protein
Products: ADP; phosphate; L-arginine [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 250; Mature: 250
Protein sequence:
>250_residues MKFIQGLLLSFFFLVSPLHAQNEPIPLIIGVGGFYPPFIMQGTNNELFGYDIATMTELCKIMKRQCNFRVMRFRQLIPAL INKQIDAAISAMSITSERSNLVNFSMPYLLSYSRFLTNEVHNTHQPFNLMLLKGKRIGVEQNTVFSQEIRRMGIIDPVIV EFDRTEEMLEALSANKIDFVLMDNPAALYWSANSSGRLLVIGSPMLIGYGLGIAVNRENSVLLKSLNDALVEYQRSDKYK ENYNKYMMNF
Sequences:
>Translated_250_residues MKFIQGLLLSFFFLVSPLHAQNEPIPLIIGVGGFYPPFIMQGTNNELFGYDIATMTELCKIMKRQCNFRVMRFRQLIPAL INKQIDAAISAMSITSERSNLVNFSMPYLLSYSRFLTNEVHNTHQPFNLMLLKGKRIGVEQNTVFSQEIRRMGIIDPVIV EFDRTEEMLEALSANKIDFVLMDNPAALYWSANSSGRLLVIGSPMLIGYGLGIAVNRENSVLLKSLNDALVEYQRSDKYK ENYNKYMMNF >Mature_250_residues MKFIQGLLLSFFFLVSPLHAQNEPIPLIIGVGGFYPPFIMQGTNNELFGYDIATMTELCKIMKRQCNFRVMRFRQLIPAL INKQIDAAISAMSITSERSNLVNFSMPYLLSYSRFLTNEVHNTHQPFNLMLLKGKRIGVEQNTVFSQEIRRMGIIDPVIV EFDRTEEMLEALSANKIDFVLMDNPAALYWSANSSGRLLVIGSPMLIGYGLGIAVNRENSVLLKSLNDALVEYQRSDKYK ENYNKYMMNF
Specific function: Part of the ABC transporter complex ArtPIQMJ involved in arginine transport. Binds L-arginine with high affinity [H]
COG id: COG0834
COG function: function code ET; ABC-type amino acid transport/signal transduction systems, periplasmic component/domain
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial solute-binding protein 3 family [H]
Homologues:
Organism=Escherichia coli, GI1787085, Length=244, Percent_Identity=34.4262295081967, Blast_Score=119, Evalue=2e-28, Organism=Escherichia coli, GI1787088, Length=218, Percent_Identity=30.7339449541284, Blast_Score=100, Evalue=1e-22, Organism=Escherichia coli, GI1788228, Length=234, Percent_Identity=27.3504273504274, Blast_Score=96, Evalue=2e-21, Organism=Escherichia coli, GI1788648, Length=232, Percent_Identity=31.0344827586207, Blast_Score=96, Evalue=3e-21, Organism=Escherichia coli, GI1788649, Length=232, Percent_Identity=28.8793103448276, Blast_Score=94, Evalue=1e-20, Organism=Escherichia coli, GI1787031, Length=240, Percent_Identity=27.0833333333333, Blast_Score=71, Evalue=6e-14,
Paralogues:
None
Copy number: 1180 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015683 - InterPro: IPR005768 - InterPro: IPR001638 - InterPro: IPR018313 [H]
Pfam domain/function: PF00497 SBP_bac_3 [H]
EC number: NA
Molecular weight: Translated: 28591; Mature: 28591
Theoretical pI: Translated: 8.61; Mature: 8.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 5.6 %Met (Translated Protein) 6.4 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 5.6 %Met (Mature Protein) 6.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKFIQGLLLSFFFLVSPLHAQNEPIPLIIGVGGFYPPFIMQGTNNELFGYDIATMTELCK CHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCEEEECCCCCEECCHHHHHHHHHH IMKRQCNFRVMRFRQLIPALINKQIDAAISAMSITSERSNLVNFSMPYLLSYSRFLTNEV HHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCHHHHHHHHHHHHHHH HNTHQPFNLMLLKGKRIGVEQNTVFSQEIRRMGIIDPVIVEFDRTEEMLEALSANKIDFV HCCCCCEEEEEEECCCCCCCCCHHHHHHHHHCCCCCHHEEEECCHHHHHHHHCCCCEEEE LMDNPAALYWSANSSGRLLVIGSPMLIGYGLGIAVNRENSVLLKSLNDALVEYQRSDKYK EECCCEEEEEECCCCCEEEEEECCEEEEECCEEEECCCCCHHHHHHHHHHHHHHHCCHHH ENYNKYMMNF HHHHHHHCCC >Mature Secondary Structure MKFIQGLLLSFFFLVSPLHAQNEPIPLIIGVGGFYPPFIMQGTNNELFGYDIATMTELCK CHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCEEEECCCCCEECCHHHHHHHHHH IMKRQCNFRVMRFRQLIPALINKQIDAAISAMSITSERSNLVNFSMPYLLSYSRFLTNEV HHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCHHHHHHHHHHHHHHH HNTHQPFNLMLLKGKRIGVEQNTVFSQEIRRMGIIDPVIVEFDRTEEMLEALSANKIDFV HCCCCCEEEEEEECCCCCCCCCHHHHHHHHHCCCCCHHEEEECCHHHHHHHHCCCCEEEE LMDNPAALYWSANSSGRLLVIGSPMLIGYGLGIAVNRENSVLLKSLNDALVEYQRSDKYK EECCCEEEEEECCCCCEEEEEECCEEEEECCEEEECCCCCHHHHHHHHHHHHHHHCCHHH ENYNKYMMNF HHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-arginine [Periplasm]; H2O [C]
Specific reaction: ATP + L-arginine [Periplasm] + H2O = ADP + phosphate + L-arginine [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8501075; 8905232; 9278503; 9298646; 9600841 [H]