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The map label for this gene is 148360578

Identifier: 148360578

GI number: 148360578

Start: 948421

End: 949527

Strand: Reverse

Name: 148360578

Synonym: LPC_2524

Alternate gene names: NA

Gene position: 949527-948421 (Counterclockwise)

Preceding gene: 148360570

Following gene: 148360579

Centisome position: 26.55

GC content: 36.13

Gene sequence:

>1107_bases
ATGTTGATAGATTCGATAAAGCAACTCTATAAAATTGGCCCCTACTCTATTGGAGAAAATCATCCTCCTATTTTTTTAGC
AGAAATAGGTACTTTTTTTAATCAGGATCTTGGCATAGCTGAACAATTGCTACACAAAATTATAAGTATCAGGGATAAAA
TACCGTATCAACCTCTTATACTAAAAACAGAAATTTTAAATAACCCAAACATTTGCCTACCTGTTGATTATGAAGAAACC
TATACCAGTAAATCAGGTGAGGTTCGCAAGGAAAACTACCGCTCATTAATTGAGAGAAAAGTACTGCCTTTAGAACATTA
TAGTATGCTATTTTCACTATTAAAGAATGCCAATTTACCCTTCATAGTTTCGATTTATGAATTGGACACTATTGATTTTG
CGATAAAGCAGGGGGCCTGCGCACTCAAAACCTCTTCATCGAACATTGTCCATATTCCTTTAATTCGTCATCTGGCAAAA
ACAGGATTACCGCTCATTATTGACACTGGAAGATCTTCCTTAACTGATATATGCAAAGCAGTTGAAACAGCAAAAAGTGC
CGGATGTGAAAAAATTATTATTGAACATAGTCCTGATGGACATCCTGCTTTGCCAGAAGCACATAACCTAAGAATGTTAC
GAACTTTAAACCAATGTTTTTCATTACCAGTTGGTTTATCTGACCATTATAATGGAATTGAAATGTTGTATATGTCTATT
GCATTGGGAGCTTCAATCCTGGAAAAAGGAGTTCATCTCTATCCAGAAGATATCGATCAGGACATATCACATACTATGGG
GATTGATCAATTAGCCAAGACTCTTGAAACAATTTACAATTGTTGGCAAGCTTTAGGTCAACCAATGCGAGATCTAGAAA
CCCCTATAAAAGGAGTACTTGGCAGCTCTCAAAGAACTTGTTTGGTTGCAAAGCAAAAACTTCAACCCGGCTCTCTAATT
AGCCTTGATAATACAACCTTTGCCTTTCCTTGTAAGGGAGTTCCTACCCAATACTGGGATCTGGTAAATGGCTGGGAATT
ACAAAACAAGGTATCTATAGGTGAACCCATTAAATGGTCGGATATTAAGCAAAAAAATGATTGTTAA

Upstream 100 bases:

>100_bases
TAGGCTGGAGATTATATAGAAGCCTTGTACAATAAAATAGAAATCAATGTAGTAATGGAATAAAGCTACTTCTTGACTAT
AACTTACGAGAAATTAACAG

Downstream 100 bases:

>100_bases
AAACCCTACTTGGAACTCTCTTACCCCTCCACTTCCTAAATTTGTTTCTTGTGATACAGGCGAGACAAATTTCCTGAAAG
AAAAATTAGGAGAAGATGGG

Product: spore coat polysaccharide biosynthesis protein E

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 368; Mature: 368

Protein sequence:

>368_residues
MLIDSIKQLYKIGPYSIGENHPPIFLAEIGTFFNQDLGIAEQLLHKIISIRDKIPYQPLILKTEILNNPNICLPVDYEET
YTSKSGEVRKENYRSLIERKVLPLEHYSMLFSLLKNANLPFIVSIYELDTIDFAIKQGACALKTSSSNIVHIPLIRHLAK
TGLPLIIDTGRSSLTDICKAVETAKSAGCEKIIIEHSPDGHPALPEAHNLRMLRTLNQCFSLPVGLSDHYNGIEMLYMSI
ALGASILEKGVHLYPEDIDQDISHTMGIDQLAKTLETIYNCWQALGQPMRDLETPIKGVLGSSQRTCLVAKQKLQPGSLI
SLDNTTFAFPCKGVPTQYWDLVNGWELQNKVSIGEPIKWSDIKQKNDC

Sequences:

>Translated_368_residues
MLIDSIKQLYKIGPYSIGENHPPIFLAEIGTFFNQDLGIAEQLLHKIISIRDKIPYQPLILKTEILNNPNICLPVDYEET
YTSKSGEVRKENYRSLIERKVLPLEHYSMLFSLLKNANLPFIVSIYELDTIDFAIKQGACALKTSSSNIVHIPLIRHLAK
TGLPLIIDTGRSSLTDICKAVETAKSAGCEKIIIEHSPDGHPALPEAHNLRMLRTLNQCFSLPVGLSDHYNGIEMLYMSI
ALGASILEKGVHLYPEDIDQDISHTMGIDQLAKTLETIYNCWQALGQPMRDLETPIKGVLGSSQRTCLVAKQKLQPGSLI
SLDNTTFAFPCKGVPTQYWDLVNGWELQNKVSIGEPIKWSDIKQKNDC
>Mature_368_residues
MLIDSIKQLYKIGPYSIGENHPPIFLAEIGTFFNQDLGIAEQLLHKIISIRDKIPYQPLILKTEILNNPNICLPVDYEET
YTSKSGEVRKENYRSLIERKVLPLEHYSMLFSLLKNANLPFIVSIYELDTIDFAIKQGACALKTSSSNIVHIPLIRHLAK
TGLPLIIDTGRSSLTDICKAVETAKSAGCEKIIIEHSPDGHPALPEAHNLRMLRTLNQCFSLPVGLSDHYNGIEMLYMSI
ALGASILEKGVHLYPEDIDQDISHTMGIDQLAKTLETIYNCWQALGQPMRDLETPIKGVLGSSQRTCLVAKQKLQPGSLI
SLDNTTFAFPCKGVPTQYWDLVNGWELQNKVSIGEPIKWSDIKQKNDC

Specific function: Unknown

COG id: COG2089

COG function: function code M; Sialic acid synthase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To B.subtilis spsE [H]

Homologues:

Organism=Homo sapiens, GI12056473, Length=314, Percent_Identity=24.203821656051, Blast_Score=82, Evalue=8e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006190
- InterPro:   IPR013785
- InterPro:   IPR013132
- InterPro:   IPR013974 [H]

Pfam domain/function: PF03102 NeuB; PF08666 SAF [H]

EC number: NA

Molecular weight: Translated: 41198; Mature: 41198

Theoretical pI: Translated: 6.43; Mature: 6.43

Prosite motif: PS50844 AFP_LIKE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLIDSIKQLYKIGPYSIGENHPPIFLAEIGTFFNQDLGIAEQLLHKIISIRDKIPYQPLI
CCHHHHHHHHHCCCCCCCCCCCCEEHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCEE
LKTEILNNPNICLPVDYEETYTSKSGEVRKENYRSLIERKVLPLEHYSMLFSLLKNANLP
EEHHHCCCCCEEEECCCHHHHCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCC
FIVSIYELDTIDFAIKQGACALKTSSSNIVHIPLIRHLAKTGLPLIIDTGRSSLTDICKA
EEEEEEEHHHHHHHHHCCCEEEEECCCCEEEHHHHHHHHHCCCCEEEECCCHHHHHHHHH
VETAKSAGCEKIIIEHSPDGHPALPEAHNLRMLRTLNQCFSLPVGLSDHYNGIEMLYMSI
HHHHHHCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHH
ALGASILEKGVHLYPEDIDQDISHTMGIDQLAKTLETIYNCWQALGQPMRDLETPIKGVL
HHHHHHHHCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
GSSQRTCLVAKQKLQPGSLISLDNTTFAFPCKGVPTQYWDLVNGWELQNKVSIGEPIKWS
CCCCCEEHHHHHHCCCCCEEEECCCEEEEECCCCCHHHHHHCCCCCCCCCCCCCCCCCCC
DIKQKNDC
CCCCCCCC
>Mature Secondary Structure
MLIDSIKQLYKIGPYSIGENHPPIFLAEIGTFFNQDLGIAEQLLHKIISIRDKIPYQPLI
CCHHHHHHHHHCCCCCCCCCCCCEEHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCEE
LKTEILNNPNICLPVDYEETYTSKSGEVRKENYRSLIERKVLPLEHYSMLFSLLKNANLP
EEHHHCCCCCEEEECCCHHHHCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCC
FIVSIYELDTIDFAIKQGACALKTSSSNIVHIPLIRHLAKTGLPLIIDTGRSSLTDICKA
EEEEEEEHHHHHHHHHCCCEEEEECCCCEEEHHHHHHHHHCCCCEEEECCCHHHHHHHHH
VETAKSAGCEKIIIEHSPDGHPALPEAHNLRMLRTLNQCFSLPVGLSDHYNGIEMLYMSI
HHHHHHCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHH
ALGASILEKGVHLYPEDIDQDISHTMGIDQLAKTLETIYNCWQALGQPMRDLETPIKGVL
HHHHHHHHCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
GSSQRTCLVAKQKLQPGSLISLDNTTFAFPCKGVPTQYWDLVNGWELQNKVSIGEPIKWS
CCCCCEEHHHHHHCCCCCEEEECCCEEEEECCCCCHHHHHHCCCCCCCCCCCCCCCCCCC
DIKQKNDC
CCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]