Definition | Legionella pneumophila str. Corby chromosome, complete genome. |
---|---|
Accession | NC_009494 |
Length | 3,576,470 |
Click here to switch to the map view.
The map label for this gene is lidA
Identifier: 148360410
GI number: 148360410
Start: 1123824
End: 1126031
Strand: Reverse
Name: lidA
Synonym: LPC_2349
Alternate gene names: NA
Gene position: 1126031-1123824 (Counterclockwise)
Preceding gene: 148360409
Following gene: 148360412
Centisome position: 31.48
GC content: 36.32
Gene sequence:
>2208_bases ATGGCAAAAGATAACAAATCACATCAAGTTAAAACATCAGAAGGGAGTCTTGAATCCGTAAAAACAAAGGAAAAGGAACC TGTTGTAGAAAAAATGCGTGTTGAGGATAGTAAAAAAGAAGATAAGCTATCAATGCCCACCACTAAAAAAGAATCTCAAC CCAATGAGCCAGCCAAGCCCTTTAAAACTTCTTTTGAGAAATGGATAGAATCCAGCTTGCTTGATCCCCAGGCTAAGGAA GACAAAGGTTCCACCATTAATCTGGGCCGAGAAGGGTTAAAAAACGCATCCCAGGTCAAAAAATTTCTTTTATCTCCGGC GGGTAAAGACGTAATAGCTGAGTTAGGTGCCCAAATGGCTCTGCAAAGAAACATCAATCTACAAAATCAACAAGACAGAA TGGAGCATGAGCTCTTTAAACGCCGATTAATGGCCGCTTTGTTTTTGTGGTATTTATCCAAAAAATCCCATGCTGCGGAA AAAGTCAAGGAAATTATTCGAGAATACAATGAAAAAGCCATAAAAAATGCTGAAAAAGCAAGCAAGCCAAGCCAACAGTC CACTTCATCCACTTCACAAGCTGATAAAGAAATTCAAAAAATGCTGGATGAATATGAACAAGCTATTAAACGTGCTCAAG AAAATATTAAGAAAGGCGAAGAATTAGAAAAAAAACTGGATAAGCTGGAACGTCAAGGCAAAGATCTTGAAGACAAGTAC AAAACCTATGAAGAAAATTTGGAAGGATTTGAAAAACTTCTCACTGACTCTGAAGAGTTATCACTATCCGAAATTAATGA AAAAATGAAAGCCTTCAGCAAAGACAGTGAGAAACTCACGCAACTGATGGAAAAGCATAAAGGCGATGAGAAAACCGTTC AATCCTTACAGCGTGAGCATCATGACATAAAAGCAAAACTGGCTAACCTGCAAGTTTTACATGACGCTCATACAGGTAAA AAATCCTATGTTAACGAAAAAGGAAACCCGGTCAGCTCATTAAAAGACGCGCACCTGGCTATTAATAAAGACCAGGAAGT AGTAGAACATAAAGGACAATTCTATCTCCTGCAAAAAGGCCAATGGGATGCCATTAAAAATGATCCCGCAGCATTAGAAA AAGCCCAAAAAGACTATAGCCAATCTAAACATGATCTTGCAACCATCAAGATGGAAGCTCTAATTCATAAGCTTAGTTTG GAAATGGAAAAACAATTGGAAACAATAAATGATCTTATTATGAGCACAGATCCAAAAGAAAATGAGGAAGCCACCAAATT GCTGCATAAACATAATGGATTAAATTTAAAATTGGCAAATCTACAAGACATGCTTGCAGTACATAGAAAAGAAAAATCCT TTTTTAATGAGAAAGGAGAGAAAGTAACATCATTAAATGATGCGCATTACGTGATAGGAAAAGATCAACAACTGTTTAAT TTAGGCGGTAAATTCTATCCTATCCATAAAGAACAAAAAATACTTGAAAAAGACGGCAAATTTTATCTTTTAAAACAAGG TGAAGACTGGGAATCTATCAAAGATAGTCCGGAAAAACAAAAAAAAGCTGAGCATGATTTTCATAAACTTCAGTATGAAA CACCAATGACAGTCAAGAAATTAGTACATCATAATAAAGGTTTAGAAACAACCATTCATAAAGAACGAATTGAAGAGACG AAACAACAATTAGAAGACAATGGAAAAGAAAAAATAGAAATAGCCAATAACATAAGTAAACTTCAATCTACAGTTGGTGT GGCTTTAAATCAACTCAACCAACCAACTTTAGATACTGAATCACCTGTCTTAACACCTTCCGGAGGAAGTACAACTGTTT CACCGAAACCAACCCCAAGCTTGGCGTCAGTGACTACTTTTTTCAAGACGAAGATAGATGAAATGAAAAAAAATGAAGAT GTTAAAGTCACCCTTGATGATATTATGGCCCTCAGTATTAAAATTGCCGATCCCAAAGCACGTACTTATTTTAAGAATGA AGTGCTTAAGTTTGCTGAACAACTTAAAGAAGTACCGCGCTCTGGAGCAATACCGTTTCAAACTATGCAACGTATGCTGC AAACTCTTGAGCAATATGGGGTAGATACTACAAAACCAAGTGTTACTTCTATAAGAAGCAAAACAGATGAAGTCCTTGAG CAACGATTTAACCCTACTCCGTCTTTATCTCCATTCAAGACATCATAA
Upstream 100 bases:
>100_bases ATGGCATAATCCTGTTAAAACATGAATAAACTGATGCTTTATTGGTCAACATTGTGTATAATATAAGATAACTGGGGGCG ATTGATTAAGGATCCTATTT
Downstream 100 bases:
>100_bases GATAGAATTATCTTTCATCTCCCTACCCTGGATTATTATCTGAGAATCATAATTCAGGGTGCTCTACCCCCACCTCAGCA TCAAACAAATTGTTGTTTTT
Product: Dot/Icm system substrate protein LidA
Products: NA
Alternate protein names: Coiled Coil Protein Some Similarities With LidA
Number of amino acids: Translated: 735; Mature: 734
Protein sequence:
>735_residues MAKDNKSHQVKTSEGSLESVKTKEKEPVVEKMRVEDSKKEDKLSMPTTKKESQPNEPAKPFKTSFEKWIESSLLDPQAKE DKGSTINLGREGLKNASQVKKFLLSPAGKDVIAELGAQMALQRNINLQNQQDRMEHELFKRRLMAALFLWYLSKKSHAAE KVKEIIREYNEKAIKNAEKASKPSQQSTSSTSQADKEIQKMLDEYEQAIKRAQENIKKGEELEKKLDKLERQGKDLEDKY KTYEENLEGFEKLLTDSEELSLSEINEKMKAFSKDSEKLTQLMEKHKGDEKTVQSLQREHHDIKAKLANLQVLHDAHTGK KSYVNEKGNPVSSLKDAHLAINKDQEVVEHKGQFYLLQKGQWDAIKNDPAALEKAQKDYSQSKHDLATIKMEALIHKLSL EMEKQLETINDLIMSTDPKENEEATKLLHKHNGLNLKLANLQDMLAVHRKEKSFFNEKGEKVTSLNDAHYVIGKDQQLFN LGGKFYPIHKEQKILEKDGKFYLLKQGEDWESIKDSPEKQKKAEHDFHKLQYETPMTVKKLVHHNKGLETTIHKERIEET KQQLEDNGKEKIEIANNISKLQSTVGVALNQLNQPTLDTESPVLTPSGGSTTVSPKPTPSLASVTTFFKTKIDEMKKNED VKVTLDDIMALSIKIADPKARTYFKNEVLKFAEQLKEVPRSGAIPFQTMQRMLQTLEQYGVDTTKPSVTSIRSKTDEVLE QRFNPTPSLSPFKTS
Sequences:
>Translated_735_residues MAKDNKSHQVKTSEGSLESVKTKEKEPVVEKMRVEDSKKEDKLSMPTTKKESQPNEPAKPFKTSFEKWIESSLLDPQAKE DKGSTINLGREGLKNASQVKKFLLSPAGKDVIAELGAQMALQRNINLQNQQDRMEHELFKRRLMAALFLWYLSKKSHAAE KVKEIIREYNEKAIKNAEKASKPSQQSTSSTSQADKEIQKMLDEYEQAIKRAQENIKKGEELEKKLDKLERQGKDLEDKY KTYEENLEGFEKLLTDSEELSLSEINEKMKAFSKDSEKLTQLMEKHKGDEKTVQSLQREHHDIKAKLANLQVLHDAHTGK KSYVNEKGNPVSSLKDAHLAINKDQEVVEHKGQFYLLQKGQWDAIKNDPAALEKAQKDYSQSKHDLATIKMEALIHKLSL EMEKQLETINDLIMSTDPKENEEATKLLHKHNGLNLKLANLQDMLAVHRKEKSFFNEKGEKVTSLNDAHYVIGKDQQLFN LGGKFYPIHKEQKILEKDGKFYLLKQGEDWESIKDSPEKQKKAEHDFHKLQYETPMTVKKLVHHNKGLETTIHKERIEET KQQLEDNGKEKIEIANNISKLQSTVGVALNQLNQPTLDTESPVLTPSGGSTTVSPKPTPSLASVTTFFKTKIDEMKKNED VKVTLDDIMALSIKIADPKARTYFKNEVLKFAEQLKEVPRSGAIPFQTMQRMLQTLEQYGVDTTKPSVTSIRSKTDEVLE QRFNPTPSLSPFKTS >Mature_734_residues AKDNKSHQVKTSEGSLESVKTKEKEPVVEKMRVEDSKKEDKLSMPTTKKESQPNEPAKPFKTSFEKWIESSLLDPQAKED KGSTINLGREGLKNASQVKKFLLSPAGKDVIAELGAQMALQRNINLQNQQDRMEHELFKRRLMAALFLWYLSKKSHAAEK VKEIIREYNEKAIKNAEKASKPSQQSTSSTSQADKEIQKMLDEYEQAIKRAQENIKKGEELEKKLDKLERQGKDLEDKYK TYEENLEGFEKLLTDSEELSLSEINEKMKAFSKDSEKLTQLMEKHKGDEKTVQSLQREHHDIKAKLANLQVLHDAHTGKK SYVNEKGNPVSSLKDAHLAINKDQEVVEHKGQFYLLQKGQWDAIKNDPAALEKAQKDYSQSKHDLATIKMEALIHKLSLE MEKQLETINDLIMSTDPKENEEATKLLHKHNGLNLKLANLQDMLAVHRKEKSFFNEKGEKVTSLNDAHYVIGKDQQLFNL GGKFYPIHKEQKILEKDGKFYLLKQGEDWESIKDSPEKQKKAEHDFHKLQYETPMTVKKLVHHNKGLETTIHKERIEETK QQLEDNGKEKIEIANNISKLQSTVGVALNQLNQPTLDTESPVLTPSGGSTTVSPKPTPSLASVTTFFKTKIDEMKKNEDV KVTLDDIMALSIKIADPKARTYFKNEVLKFAEQLKEVPRSGAIPFQTMQRMLQTLEQYGVDTTKPSVTSIRSKTDEVLEQ RFNPTPSLSPFKTS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 83958; Mature: 83827
Theoretical pI: Translated: 9.09; Mature: 9.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKDNKSHQVKTSEGSLESVKTKEKEPVVEKMRVEDSKKEDKLSMPTTKKESQPNEPAKP CCCCCCCCEEECCCCCHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCH FKTSFEKWIESSLLDPQAKEDKGSTINLGREGLKNASQVKKFLLSPAGKDVIAELGAQMA HHHHHHHHHHHHCCCCCCCCCCCCEECCCHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHH LQRNINLQNQQDRMEHELFKRRLMAALFLWYLSKKSHAAEKVKEIIREYNEKAIKNAEKA HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SKPSQQSTSSTSQADKEIQKMLDEYEQAIKRAQENIKKGEELEKKLDKLERQGKDLEDKY CCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCHHHHH KTYEENLEGFEKLLTDSEELSLSEINEKMKAFSKDSEKLTQLMEKHKGDEKTVQSLQREH HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHH HDIKAKLANLQVLHDAHTGKKSYVNEKGNPVSSLKDAHLAINKDQEVVEHKGQFYLLQKG HHHHHHHHHHHHHHHHCCCHHHHHCCCCCCHHHHHHHHHHCCCCHHHHHCCCCEEEEECC QWDAIKNDPAALEKAQKDYSQSKHDLATIKMEALIHKLSLEMEKQLETINDLIMSTDPKE CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC NEEATKLLHKHNGLNLKLANLQDMLAVHRKEKSFFNEKGEKVTSLNDAHYVIGKDQQLFN CHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCEEEECCCHHHHH LGGKFYPIHKEQKILEKDGKFYLLKQGEDWESIKDSPEKQKKAEHDFHKLQYETPMTVKK CCCCEEECCHHHHHHHCCCCEEEEECCCCHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHH LVHHNKGLETTIHKERIEETKQQLEDNGKEKIEIANNISKLQSTVGVALNQLNQPTLDTE HHHHCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC SPVLTPSGGSTTVSPKPTPSLASVTTFFKTKIDEMKKNEDVKVTLDDIMALSIKIADPKA CCEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEHHHHHEEEEEECCCHH RTYFKNEVLKFAEQLKEVPRSGAIPFQTMQRMLQTLEQYGVDTTKPSVTSIRSKTDEVLE HHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH QRFNPTPSLSPFKTS HHCCCCCCCCCCCCC >Mature Secondary Structure AKDNKSHQVKTSEGSLESVKTKEKEPVVEKMRVEDSKKEDKLSMPTTKKESQPNEPAKP CCCCCCCEEECCCCCHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCH FKTSFEKWIESSLLDPQAKEDKGSTINLGREGLKNASQVKKFLLSPAGKDVIAELGAQMA HHHHHHHHHHHHCCCCCCCCCCCCEECCCHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHH LQRNINLQNQQDRMEHELFKRRLMAALFLWYLSKKSHAAEKVKEIIREYNEKAIKNAEKA HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SKPSQQSTSSTSQADKEIQKMLDEYEQAIKRAQENIKKGEELEKKLDKLERQGKDLEDKY CCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCHHHHH KTYEENLEGFEKLLTDSEELSLSEINEKMKAFSKDSEKLTQLMEKHKGDEKTVQSLQREH HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHH HDIKAKLANLQVLHDAHTGKKSYVNEKGNPVSSLKDAHLAINKDQEVVEHKGQFYLLQKG HHHHHHHHHHHHHHHHCCCHHHHHCCCCCCHHHHHHHHHHCCCCHHHHHCCCCEEEEECC QWDAIKNDPAALEKAQKDYSQSKHDLATIKMEALIHKLSLEMEKQLETINDLIMSTDPKE CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC NEEATKLLHKHNGLNLKLANLQDMLAVHRKEKSFFNEKGEKVTSLNDAHYVIGKDQQLFN CHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCEEEECCCHHHHH LGGKFYPIHKEQKILEKDGKFYLLKQGEDWESIKDSPEKQKKAEHDFHKLQYETPMTVKK CCCCEEECCHHHHHHHCCCCEEEEECCCCHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHH LVHHNKGLETTIHKERIEETKQQLEDNGKEKIEIANNISKLQSTVGVALNQLNQPTLDTE HHHHCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC SPVLTPSGGSTTVSPKPTPSLASVTTFFKTKIDEMKKNEDVKVTLDDIMALSIKIADPKA CCEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEHHHHHEEEEEECCCHH RTYFKNEVLKFAEQLKEVPRSGAIPFQTMQRMLQTLEQYGVDTTKPSVTSIRSKTDEVLE HHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH QRFNPTPSLSPFKTS HHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA