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The map label for this gene is 148360405

Identifier: 148360405

GI number: 148360405

Start: 1132619

End: 1133506

Strand: Reverse

Name: 148360405

Synonym: LPC_2344

Alternate gene names: NA

Gene position: 1133506-1132619 (Counterclockwise)

Preceding gene: 148360399

Following gene: 148360406

Centisome position: 31.69

GC content: 35.14

Gene sequence:

>888_bases
GTGTTAACATTATCGGATTTGGAAAAAGGCTATGATAAAAATCTTAATCAACTCTCATTATCCTTTTTAAATCTTAGAGA
TAATGACATACCACTGCTATGTGAGTTTCTTCAAAATCATCCTGCCATAACCAGTCTTGACCTGTCACATAATGATATTA
CAGCCAATGGTATGAAGCTTTTTGTTAATAAAACATCGGTTTCATCCCTTAACATTAGCCATAATAATATTGGTCCGGAG
GGTGCTCAATGGCTATCAGAAGATAACCACATTACTACGTTAGATGTCAGTTTTAACGAGATTGGTGACGAGGGAATTAA
AGCTCTAGCCGCTAACGCCAAACTGATAACCCTTTATGCACTTTATAATAAGATAACCAAAGTAGGTGCAGGCTATCTTG
CTCAATCCAATCTTAAGAAAATAGATCTATGCTTCAATAGTCTGGAAGATGAGGGGGTTATAGCATTAGCAAGTAATATC
AATATAAAAGAGCTGATTGCAAGCGCTTGTGATGTCTCTGATATTGGAGCTATTGAATTAGCTAAAAACAATCAACTGAC
TTTACTTATTTTGGGAAAAAACGCGATAACCGATAAATCAACACTCCATTTTGCTAATAACACGTCTTTGAGTACCCTTC
ATCTGGGTAGTAATCAAATTACAGCAGCAGGTAAAAAAATACTTGAAACCAATACCAGGATAACGGACCTCGATTTAATC
GGCAATCCAATTGAAGTGCATGAAACAGATGAACTAAATTATTCTAAAAAATCGGCAAACTCCCATAGTGTATTTAAGTT
TTTGCAAAAATTTACTTTTCTCAGTTGTATGTCACCTTGTCAAGAAACCGCAGAAAGCGATAAAGGCTTAAATAAAAAAC
CGAATTAA

Upstream 100 bases:

>100_bases
ATTTCCCTGAATCATCATAAACTGAACAAAAAGCTTGATATGATTTTCTTGTTTAAGTAAAATATTAAACAATTTTAATT
ATAATTGAACATGGTGTTTG

Downstream 100 bases:

>100_bases
TTATGAAATCACAATTATCATAATCAAGATTCAGTAAAAATAACAACCCAAGAGGTAATTTTTTATTCATATCCATAAAA
ATAAAAGCACTATATTTTTA

Product: Gala protein

Products: NA

Alternate protein names: GALA Protein; Type III Effector; Leucine-Rich Repeat Protein; Leucine-Rich Repeat Ribonuclease Inhibitor Subtype; Type III Effector Gala6 Protein; Type III Effector Protein; Cyclin Domain-Containing Protein

Number of amino acids: Translated: 295; Mature: 295

Protein sequence:

>295_residues
MLTLSDLEKGYDKNLNQLSLSFLNLRDNDIPLLCEFLQNHPAITSLDLSHNDITANGMKLFVNKTSVSSLNISHNNIGPE
GAQWLSEDNHITTLDVSFNEIGDEGIKALAANAKLITLYALYNKITKVGAGYLAQSNLKKIDLCFNSLEDEGVIALASNI
NIKELIASACDVSDIGAIELAKNNQLTLLILGKNAITDKSTLHFANNTSLSTLHLGSNQITAAGKKILETNTRITDLDLI
GNPIEVHETDELNYSKKSANSHSVFKFLQKFTFLSCMSPCQETAESDKGLNKKPN

Sequences:

>Translated_295_residues
MLTLSDLEKGYDKNLNQLSLSFLNLRDNDIPLLCEFLQNHPAITSLDLSHNDITANGMKLFVNKTSVSSLNISHNNIGPE
GAQWLSEDNHITTLDVSFNEIGDEGIKALAANAKLITLYALYNKITKVGAGYLAQSNLKKIDLCFNSLEDEGVIALASNI
NIKELIASACDVSDIGAIELAKNNQLTLLILGKNAITDKSTLHFANNTSLSTLHLGSNQITAAGKKILETNTRITDLDLI
GNPIEVHETDELNYSKKSANSHSVFKFLQKFTFLSCMSPCQETAESDKGLNKKPN
>Mature_295_residues
MLTLSDLEKGYDKNLNQLSLSFLNLRDNDIPLLCEFLQNHPAITSLDLSHNDITANGMKLFVNKTSVSSLNISHNNIGPE
GAQWLSEDNHITTLDVSFNEIGDEGIKALAANAKLITLYALYNKITKVGAGYLAQSNLKKIDLCFNSLEDEGVIALASNI
NIKELIASACDVSDIGAIELAKNNQLTLLILGKNAITDKSTLHFANNTSLSTLHLGSNQITAAGKKILETNTRITDLDLI
GNPIEVHETDELNYSKKSANSHSVFKFLQKFTFLSCMSPCQETAESDKGLNKKPN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI118918429, Length=266, Percent_Identity=28.9473684210526, Blast_Score=72, Evalue=8e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32209; Mature: 32209

Theoretical pI: Translated: 5.34; Mature: 5.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLTLSDLEKGYDKNLNQLSLSFLNLRDNDIPLLCEFLQNHPAITSLDLSHNDITANGMKL
CCCHHHHHHHHCCCCHHEEEEEEECCCCCHHHHHHHHHCCCCEEEEECCCCCEECCCEEE
FVNKTSVSSLNISHNNIGPEGAQWLSEDNHITTLDVSFNEIGDEGIKALAANAKLITLYA
EEEECCCEEEEECCCCCCCCHHHHHCCCCCEEEEEECHHHHCHHHHHHHHCCCEEEEHHH
LYNKITKVGAGYLAQSNLKKIDLCFNSLEDEGVIALASNINIKELIASACDVSDIGAIEL
HHHHHHHHCCCHHHHCCCCEEEHHHHCCCCCCEEEEECCCCHHHHHHHHCCCCCCCEEEE
AKNNQLTLLILGKNAITDKSTLHFANNTSLSTLHLGSNQITAAGKKILETNTRITDLDLI
ECCCCEEEEEECCCCCCCCCEEEEECCCCEEEEEECCCEEHHHHHHHHHCCCEEEEHHHC
GNPIEVHETDELNYSKKSANSHSVFKFLQKFTFLSCMSPCQETAESDKGLNKKPN
CCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MLTLSDLEKGYDKNLNQLSLSFLNLRDNDIPLLCEFLQNHPAITSLDLSHNDITANGMKL
CCCHHHHHHHHCCCCHHEEEEEEECCCCCHHHHHHHHHCCCCEEEEECCCCCEECCCEEE
FVNKTSVSSLNISHNNIGPEGAQWLSEDNHITTLDVSFNEIGDEGIKALAANAKLITLYA
EEEECCCEEEEECCCCCCCCHHHHHCCCCCEEEEEECHHHHCHHHHHHHHCCCEEEEHHH
LYNKITKVGAGYLAQSNLKKIDLCFNSLEDEGVIALASNINIKELIASACDVSDIGAIEL
HHHHHHHHCCCHHHHCCCCEEEHHHHCCCCCCEEEEECCCCHHHHHHHHCCCCCCCEEEE
AKNNQLTLLILGKNAITDKSTLHFANNTSLSTLHLGSNQITAAGKKILETNTRITDLDLI
ECCCCEEEEEECCCCCCCCCEEEEECCCCEEEEEECCCEEHHHHHHHHHCCCEEEEHHHC
GNPIEVHETDELNYSKKSANSHSVFKFLQKFTFLSCMSPCQETAESDKGLNKKPN
CCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA