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The map label for this gene is 148360354

Identifier: 148360354

GI number: 148360354

Start: 1193467

End: 1194834

Strand: Reverse

Name: 148360354

Synonym: LPC_2292

Alternate gene names: NA

Gene position: 1194834-1193467 (Counterclockwise)

Preceding gene: 148360353

Following gene: 148360355

Centisome position: 33.41

GC content: 40.79

Gene sequence:

>1368_bases
ATGAATAAATATCTATTATTAACCTTACTTATTCCGCACCTAACCCATGCCGGAAACTTTATGCCCAGCCAATCAGATTA
CTATTATGAATTAGGAGGAACCTCCAATTTATTTATACCACCTGTTAATAAAGATCAAACGCTGGTTATTGGTGCAGATA
TTGATGGCCGTATGGGATTCTCTTGTAGCGGTTTTAATCCTGTCGTATCCATTACCAATACCTTTCAGGATTTAAAAAAA
TCAGCATTAAATATCCCTGGTGGTGTCATTGATAACTTAAAAGGTTCAGTCGCAGGATTCCCTCTTTATAAGCTGCAACA
GTCCATGCCTGCTTTATACAATGTTCTACAAAACGCTGCATCCAGTGCACAAAACGAATTTACCCTCAAGGTTAAAGATT
GTCAGGAAGTCAAACAAGCACTGGAACAAAACCAATCTCCAATGGAAGGCATATTATCAGTATCCGATAGTCAAGGATGG
CTTGATGCTGCCAAACGAGCTAAAAAGGAAAACGTCGATGTGACCGAAACATCAAAAAGCATCGCTCAAAAGCGAGATGA
ATATGGTCTACCCTGGATAGGCAGCAATAAAGGCAATGCGGGCGGTAAGTTTCAACGCCCAATTAAGGTAATTAATGATG
TAGTCATTGCGGGCTACAACATTCTTTTAGAGAGAAAACCTTTAGATTCTTTGGAAAAACCAAGCACCAAAATTCCTATG
GTACAAAGCTGGCCAACACCTACCGATGCTGCTAATTGGGCAGTTAAGGTTCTTGGCGATATCCAGGTCAGCAGCAGTGA
AAACAAACAAAGCCATGATGCTAAAGCAGGGATTGGTTTATCAGCTTTATTGCAAAGCTGCGCGAACGCCAATACCTGTA
GCCAGAACATTGCCAAGGCCTTATGGAATTTAGTCAATGGTACTTGGACGCTTACTGAAGAAAATCTGAGTAAAGTCAGT
GCCTCCAATTTACTGATTACTGATGAAGTCATTACTACTATTCAGCACCTGCCCCGTGAAGAACAAATGCTTACTGTCTC
AAAACTGGCAGAAGAAATCGCTGTTCAAAATATGCTGGATAAAGCCTTAATGATGCGCCGCATCTTACAAGCAGGATTAC
AAGTGCAAGAAGTACAGAATTTAAAACCTGCTATGAATATGGTCTTGTTTGCCCTGAAAAAACTAGACGATGACATTCAT
TCTTTGTCCTTTGAAAACGATGTCCGCAAAAAAATGATGACTGAGACTTTGGGAACCATCATGGACATTCGCCATCAAGC
CCAAAGCCAAAATATGCCAGGCCAGGATCACGAACAGCCTGCTGTTAAAAACGGCGCAATCTACGTTAAAGAAAATAAAG
GAGCTTAA

Upstream 100 bases:

>100_bases
TTGGCGCAAATATCGCGGCTGTATTCAGAACAAAGGCAAACTCGTGAACTTTCTCACTTTCCCAAAAGTTGGACAACCTC
AAAAACGATAGGACATCAAC

Downstream 100 bases:

>100_bases
TCATGATTGTCTTTAATCCTTTATCTCTCTATACCACCTATCTAGGCTGGCAACAGTATGAGGTTCTATTCAACGCCCTG
TGGCAAACAGGGCTGTTGTA

Product: pilus retraction ATPase PilT

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 455; Mature: 455

Protein sequence:

>455_residues
MNKYLLLTLLIPHLTHAGNFMPSQSDYYYELGGTSNLFIPPVNKDQTLVIGADIDGRMGFSCSGFNPVVSITNTFQDLKK
SALNIPGGVIDNLKGSVAGFPLYKLQQSMPALYNVLQNAASSAQNEFTLKVKDCQEVKQALEQNQSPMEGILSVSDSQGW
LDAAKRAKKENVDVTETSKSIAQKRDEYGLPWIGSNKGNAGGKFQRPIKVINDVVIAGYNILLERKPLDSLEKPSTKIPM
VQSWPTPTDAANWAVKVLGDIQVSSSENKQSHDAKAGIGLSALLQSCANANTCSQNIAKALWNLVNGTWTLTEENLSKVS
ASNLLITDEVITTIQHLPREEQMLTVSKLAEEIAVQNMLDKALMMRRILQAGLQVQEVQNLKPAMNMVLFALKKLDDDIH
SLSFENDVRKKMMTETLGTIMDIRHQAQSQNMPGQDHEQPAVKNGAIYVKENKGA

Sequences:

>Translated_455_residues
MNKYLLLTLLIPHLTHAGNFMPSQSDYYYELGGTSNLFIPPVNKDQTLVIGADIDGRMGFSCSGFNPVVSITNTFQDLKK
SALNIPGGVIDNLKGSVAGFPLYKLQQSMPALYNVLQNAASSAQNEFTLKVKDCQEVKQALEQNQSPMEGILSVSDSQGW
LDAAKRAKKENVDVTETSKSIAQKRDEYGLPWIGSNKGNAGGKFQRPIKVINDVVIAGYNILLERKPLDSLEKPSTKIPM
VQSWPTPTDAANWAVKVLGDIQVSSSENKQSHDAKAGIGLSALLQSCANANTCSQNIAKALWNLVNGTWTLTEENLSKVS
ASNLLITDEVITTIQHLPREEQMLTVSKLAEEIAVQNMLDKALMMRRILQAGLQVQEVQNLKPAMNMVLFALKKLDDDIH
SLSFENDVRKKMMTETLGTIMDIRHQAQSQNMPGQDHEQPAVKNGAIYVKENKGA
>Mature_455_residues
MNKYLLLTLLIPHLTHAGNFMPSQSDYYYELGGTSNLFIPPVNKDQTLVIGADIDGRMGFSCSGFNPVVSITNTFQDLKK
SALNIPGGVIDNLKGSVAGFPLYKLQQSMPALYNVLQNAASSAQNEFTLKVKDCQEVKQALEQNQSPMEGILSVSDSQGW
LDAAKRAKKENVDVTETSKSIAQKRDEYGLPWIGSNKGNAGGKFQRPIKVINDVVIAGYNILLERKPLDSLEKPSTKIPM
VQSWPTPTDAANWAVKVLGDIQVSSSENKQSHDAKAGIGLSALLQSCANANTCSQNIAKALWNLVNGTWTLTEENLSKVS
ASNLLITDEVITTIQHLPREEQMLTVSKLAEEIAVQNMLDKALMMRRILQAGLQVQEVQNLKPAMNMVLFALKKLDDDIH
SLSFENDVRKKMMTETLGTIMDIRHQAQSQNMPGQDHEQPAVKNGAIYVKENKGA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 49998; Mature: 49998

Theoretical pI: Translated: 6.88; Mature: 6.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKYLLLTLLIPHLTHAGNFMPSQSDYYYELGGTSNLFIPPVNKDQTLVIGADIDGRMGF
CCCCEEHHHHHHHHHHCCCCCCCCCCEEEEECCCCCEEECCCCCCCEEEEECCCCCCCCC
SCSGFNPVVSITNTFQDLKKSALNIPGGVIDNLKGSVAGFPLYKLQQSMPALYNVLQNAA
CCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
SSAQNEFTLKVKDCQEVKQALEQNQSPMEGILSVSDSQGWLDAAKRAKKENVDVTETSKS
HCCCCCEEEEEHHHHHHHHHHHCCCCCHHHHHCCCCCCHHHHHHHHHHHCCCCHHHHHHH
IAQKRDEYGLPWIGSNKGNAGGKFQRPIKVINDVVIAGYNILLERKPLDSLEKPSTKIPM
HHHHHHHCCCCEECCCCCCCCCCHHHHHHHHHHHHHHCHHEEEECCCCCHHCCCCCCCCC
VQSWPTPTDAANWAVKVLGDIQVSSSENKQSHDAKAGIGLSALLQSCANANTCSQNIAKA
EECCCCCCCHHHHHEEEEEEEEECCCCCCHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHH
LWNLVNGTWTLTEENLSKVSASNLLITDEVITTIQHLPREEQMLTVSKLAEEIAVQNMLD
HHHHHCCEEEEEHHHHHHHHHCCEEEHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
KALMMRRILQAGLQVQEVQNLKPAMNMVLFALKKLDDDIHSLSFENDVRKKMMTETLGTI
HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
MDIRHQAQSQNMPGQDHEQPAVKNGAIYVKENKGA
HHHHHHHHHCCCCCCCCCCCCCCCCEEEEECCCCC
>Mature Secondary Structure
MNKYLLLTLLIPHLTHAGNFMPSQSDYYYELGGTSNLFIPPVNKDQTLVIGADIDGRMGF
CCCCEEHHHHHHHHHHCCCCCCCCCCEEEEECCCCCEEECCCCCCCEEEEECCCCCCCCC
SCSGFNPVVSITNTFQDLKKSALNIPGGVIDNLKGSVAGFPLYKLQQSMPALYNVLQNAA
CCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
SSAQNEFTLKVKDCQEVKQALEQNQSPMEGILSVSDSQGWLDAAKRAKKENVDVTETSKS
HCCCCCEEEEEHHHHHHHHHHHCCCCCHHHHHCCCCCCHHHHHHHHHHHCCCCHHHHHHH
IAQKRDEYGLPWIGSNKGNAGGKFQRPIKVINDVVIAGYNILLERKPLDSLEKPSTKIPM
HHHHHHHCCCCEECCCCCCCCCCHHHHHHHHHHHHHHCHHEEEECCCCCHHCCCCCCCCC
VQSWPTPTDAANWAVKVLGDIQVSSSENKQSHDAKAGIGLSALLQSCANANTCSQNIAKA
EECCCCCCCHHHHHEEEEEEEEECCCCCCHHHHHHCCCCHHHHHHHHCCCCHHHHHHHHH
LWNLVNGTWTLTEENLSKVSASNLLITDEVITTIQHLPREEQMLTVSKLAEEIAVQNMLD
HHHHHCCEEEEEHHHHHHHHHCCEEEHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
KALMMRRILQAGLQVQEVQNLKPAMNMVLFALKKLDDDIHSLSFENDVRKKMMTETLGTI
HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
MDIRHQAQSQNMPGQDHEQPAVKNGAIYVKENKGA
HHHHHHHHHCCCCCCCCCCCCCCCCEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA