Definition | Legionella pneumophila str. Corby chromosome, complete genome. |
---|---|
Accession | NC_009494 |
Length | 3,576,470 |
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The map label for this gene is cbpA [H]
Identifier: 148359807
GI number: 148359807
Start: 2682254
End: 2683144
Strand: Direct
Name: cbpA [H]
Synonym: LPC_1732
Alternate gene names: 148359807
Gene position: 2682254-2683144 (Clockwise)
Preceding gene: 148359806
Following gene: 148359808
Centisome position: 75.0
GC content: 41.3
Gene sequence:
>891_bases ATGGATAAAGACTACTATAAAATCATGGGAGTCAGTCAGGATGCTTCTGAAAAAGACATCAAAATGGCTTACCGAAAATT AGCCCGCAAATATCACCCCGATATTAGTAAAGAACCAGATGCTGAAGAACGATTTAAAGAAATGGCAGAAGCCTATGAAG TACTGAAAGACCCTAAAAAAAGATCCGAATATGATCAATATCTGAAATACAAGGAATTCAATCCCCAAAACGATGGATTT ACCGGGCGAAGAACTCAAGAACAACCCTTTCAGGAATTTCATTTTGACAGCGATTTTTTTGAAACCTTGTTTGGACATTC GCGCTATCAACAGCAACCGATGACTGGTCAAAACTATCATGGCAAAATCACTATCAGTCTGGAGGAAGCTTACCATGGAG CTGTTAAAAACTTACAAGTTCCTGTTGAACAAGGCACAGAGACTAAAATGCAGACCCTTAAAGTTAAAATCCCTGCAGGG GTTAAATCAGGACAACAAATTCGCTTGGCAGGACAAGGAGGCAGTGGAAGCGGAGGAGGTGCTCGCGGCGACCTGTATCT AACAGTCGAGGTGATAAAACACCCCATATTTGATGTCATGGAGAATGATATTTATCTCACATTACCTATCACACCGTGGG AAGCTGCATTAGGAGCTACGGTTGTCATACCAACCCTGGCAGGAAAAATCGATTTAAAAATCCCTCCGGGCTCACAAGGT GGGCAAAAACTCAGAATTAAAAATCGCGGATTACCAGGTTCACCCCCTGGTAATCAATATGTTCTATTAAAAATTATTAC CCCCCCTGCTCAAACTGAAGAAGCAAAAGCTTTATATAAAAAAATGGCGGAGGTAATGCCTTACAACCCTCGTAAGACTA TGGGAGTATAA
Upstream 100 bases:
>100_bases TATTCCAGCGAATGAAGAAAAAATGATGGCTATGCATACCTTGACAGCCCTCAGGACGTAAAGGCGTATTTTTTACTGGC ATAGGTAATGAGTATAAAAA
Downstream 100 bases:
>100_bases GCATGAGCAAAGATAATCTTAAAGACAATCTTTTAATAGGCATGCTTATTGAAGAAACCACAACGATTTCTTTTATTGAA GTATGTCAAAAGTATCATAT
Product: curved DNA binding protein DnaJ
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 296; Mature: 296
Protein sequence:
>296_residues MDKDYYKIMGVSQDASEKDIKMAYRKLARKYHPDISKEPDAEERFKEMAEAYEVLKDPKKRSEYDQYLKYKEFNPQNDGF TGRRTQEQPFQEFHFDSDFFETLFGHSRYQQQPMTGQNYHGKITISLEEAYHGAVKNLQVPVEQGTETKMQTLKVKIPAG VKSGQQIRLAGQGGSGSGGGARGDLYLTVEVIKHPIFDVMENDIYLTLPITPWEAALGATVVIPTLAGKIDLKIPPGSQG GQKLRIKNRGLPGSPPGNQYVLLKIITPPAQTEEAKALYKKMAEVMPYNPRKTMGV
Sequences:
>Translated_296_residues MDKDYYKIMGVSQDASEKDIKMAYRKLARKYHPDISKEPDAEERFKEMAEAYEVLKDPKKRSEYDQYLKYKEFNPQNDGF TGRRTQEQPFQEFHFDSDFFETLFGHSRYQQQPMTGQNYHGKITISLEEAYHGAVKNLQVPVEQGTETKMQTLKVKIPAG VKSGQQIRLAGQGGSGSGGGARGDLYLTVEVIKHPIFDVMENDIYLTLPITPWEAALGATVVIPTLAGKIDLKIPPGSQG GQKLRIKNRGLPGSPPGNQYVLLKIITPPAQTEEAKALYKKMAEVMPYNPRKTMGV >Mature_296_residues MDKDYYKIMGVSQDASEKDIKMAYRKLARKYHPDISKEPDAEERFKEMAEAYEVLKDPKKRSEYDQYLKYKEFNPQNDGF TGRRTQEQPFQEFHFDSDFFETLFGHSRYQQQPMTGQNYHGKITISLEEAYHGAVKNLQVPVEQGTETKMQTLKVKIPAG VKSGQQIRLAGQGGSGSGGGARGDLYLTVEVIKHPIFDVMENDIYLTLPITPWEAALGATVVIPTLAGKIDLKIPPGSQG GQKLRIKNRGLPGSPPGNQYVLLKIITPPAQTEEAKALYKKMAEVMPYNPRKTMGV
Specific function: DNA-binding protein that preferentially recognizes a curved DNA sequence. It is probably a functional analog of DnaJ; displays overlapping activities with DnaJ, but functions under different conditions, probably acting as a molecular chaperone in an adapt
COG id: COG2214
COG function: function code O; DnaJ-class molecular chaperone
Gene ontology:
Cell location: Cytoplasm, nucleoid [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 J domain [H]
Homologues:
Organism=Homo sapiens, GI6631085, Length=304, Percent_Identity=30.5921052631579, Blast_Score=119, Evalue=4e-27, Organism=Homo sapiens, GI5453690, Length=305, Percent_Identity=30.4918032786885, Blast_Score=118, Evalue=7e-27, Organism=Homo sapiens, GI201862587, Length=346, Percent_Identity=29.1907514450867, Blast_Score=117, Evalue=1e-26, Organism=Homo sapiens, GI56549115, Length=346, Percent_Identity=29.1907514450867, Blast_Score=117, Evalue=1e-26, Organism=Homo sapiens, GI201862518, Length=346, Percent_Identity=29.1907514450867, Blast_Score=117, Evalue=1e-26, Organism=Homo sapiens, GI7706495, Length=332, Percent_Identity=30.1204819277108, Blast_Score=102, Evalue=5e-22, Organism=Homo sapiens, GI39204547, Length=318, Percent_Identity=26.4150943396226, Blast_Score=100, Evalue=3e-21, Organism=Homo sapiens, GI56687498, Length=109, Percent_Identity=43.1192660550459, Blast_Score=91, Evalue=1e-18, Organism=Homo sapiens, GI194328760, Length=134, Percent_Identity=39.5522388059701, Blast_Score=87, Evalue=3e-17, Organism=Homo sapiens, GI194328758, Length=134, Percent_Identity=39.5522388059701, Blast_Score=86, Evalue=3e-17, Organism=Homo sapiens, GI9558755, Length=63, Percent_Identity=60.3174603174603, Blast_Score=85, Evalue=9e-17, Organism=Homo sapiens, GI205360840, Length=66, Percent_Identity=57.5757575757576, Blast_Score=83, Evalue=3e-16, Organism=Homo sapiens, GI205360838, Length=66, Percent_Identity=57.5757575757576, Blast_Score=83, Evalue=4e-16, Organism=Homo sapiens, GI4504511, Length=140, Percent_Identity=35, Blast_Score=82, Evalue=4e-16, Organism=Homo sapiens, GI194306642, Length=65, Percent_Identity=55.3846153846154, Blast_Score=81, Evalue=1e-15, Organism=Homo sapiens, GI194306640, Length=65, Percent_Identity=55.3846153846154, Blast_Score=81, Evalue=1e-15, Organism=Homo sapiens, GI47777312, Length=107, Percent_Identity=47.6635514018692, Blast_Score=79, Evalue=5e-15, Organism=Homo sapiens, GI4885495, Length=66, Percent_Identity=59.0909090909091, Blast_Score=78, Evalue=8e-15, Organism=Homo sapiens, GI72534740, Length=105, Percent_Identity=40.9523809523809, Blast_Score=78, Evalue=9e-15, Organism=Homo sapiens, GI17388799, Length=66, Percent_Identity=59.0909090909091, Blast_Score=78, Evalue=1e-14, Organism=Homo sapiens, GI22749377, Length=65, Percent_Identity=50.7692307692308, Blast_Score=75, Evalue=9e-14, Organism=Homo sapiens, GI5031741, Length=66, Percent_Identity=54.5454545454545, Blast_Score=74, Evalue=2e-13, Organism=Homo sapiens, GI23503241, Length=67, Percent_Identity=56.7164179104478, Blast_Score=73, Evalue=3e-13, Organism=Homo sapiens, GI27151736, Length=116, Percent_Identity=43.1034482758621, Blast_Score=72, Evalue=5e-13, Organism=Homo sapiens, GI88501736, Length=116, Percent_Identity=43.1034482758621, Blast_Score=72, Evalue=8e-13, Organism=Homo sapiens, GI21361912, Length=65, Percent_Identity=47.6923076923077, Blast_Score=71, Evalue=1e-12, Organism=Homo sapiens, GI21553335, Length=66, Percent_Identity=53.030303030303, Blast_Score=70, Evalue=3e-12, Organism=Homo sapiens, GI217035105, Length=70, Percent_Identity=42.8571428571429, Blast_Score=67, Evalue=3e-11, Organism=Homo sapiens, GI24308127, Length=67, Percent_Identity=46.2686567164179, Blast_Score=67, Evalue=3e-11, Organism=Escherichia coli, GI1787235, Length=307, Percent_Identity=46.2540716612378, Blast_Score=250, Evalue=9e-68, Organism=Escherichia coli, GI1786197, Length=347, Percent_Identity=33.4293948126801, Blast_Score=159, Evalue=2e-40, Organism=Caenorhabditis elegans, GI17553096, Length=347, Percent_Identity=28.8184438040346, Blast_Score=111, Evalue=4e-25, Organism=Caenorhabditis elegans, GI17553098, Length=347, Percent_Identity=28.8184438040346, Blast_Score=111, Evalue=4e-25, Organism=Caenorhabditis elegans, GI17534355, Length=67, Percent_Identity=59.7014925373134, Blast_Score=87, Evalue=7e-18, Organism=Caenorhabditis elegans, GI17507263, Length=62, Percent_Identity=56.4516129032258, Blast_Score=75, Evalue=5e-14, Organism=Caenorhabditis elegans, GI115532476, Length=65, Percent_Identity=52.3076923076923, Blast_Score=75, Evalue=6e-14, Organism=Caenorhabditis elegans, GI17538236, Length=65, Percent_Identity=52.3076923076923, Blast_Score=72, Evalue=3e-13, Organism=Caenorhabditis elegans, GI212645553, Length=66, Percent_Identity=46.969696969697, Blast_Score=71, Evalue=8e-13, Organism=Caenorhabditis elegans, GI17554644, Length=87, Percent_Identity=44.8275862068966, Blast_Score=70, Evalue=9e-13, Organism=Caenorhabditis elegans, GI115532378, Length=99, Percent_Identity=38.3838383838384, Blast_Score=67, Evalue=1e-11, Organism=Caenorhabditis elegans, GI17563890, Length=65, Percent_Identity=50.7692307692308, Blast_Score=65, Evalue=5e-11, Organism=Caenorhabditis elegans, GI17543226, Length=91, Percent_Identity=39.5604395604396, Blast_Score=65, Evalue=6e-11, Organism=Saccharomyces cerevisiae, GI6324265, Length=139, Percent_Identity=38.1294964028777, Blast_Score=80, Evalue=5e-16, Organism=Saccharomyces cerevisiae, GI6321094, Length=161, Percent_Identity=32.9192546583851, Blast_Score=75, Evalue=2e-14, Organism=Saccharomyces cerevisiae, GI6323870, Length=205, Percent_Identity=32.1951219512195, Blast_Score=73, Evalue=5e-14, Organism=Saccharomyces cerevisiae, GI6323119, Length=66, Percent_Identity=50, Blast_Score=70, Evalue=3e-13, Organism=Saccharomyces cerevisiae, GI6324321, Length=62, Percent_Identity=53.2258064516129, Blast_Score=69, Evalue=1e-12, Organism=Saccharomyces cerevisiae, GI6322194, Length=109, Percent_Identity=40.3669724770642, Blast_Score=65, Evalue=2e-11, Organism=Saccharomyces cerevisiae, GI6322388, Length=84, Percent_Identity=44.047619047619, Blast_Score=64, Evalue=2e-11, Organism=Saccharomyces cerevisiae, GI6323813, Length=63, Percent_Identity=47.6190476190476, Blast_Score=62, Evalue=8e-11, Organism=Drosophila melanogaster, GI85726398, Length=354, Percent_Identity=29.0960451977401, Blast_Score=108, Evalue=3e-24, Organism=Drosophila melanogaster, GI24658562, Length=342, Percent_Identity=28.6549707602339, Blast_Score=103, Evalue=1e-22, Organism=Drosophila melanogaster, GI24658555, Length=342, Percent_Identity=28.6549707602339, Blast_Score=103, Evalue=1e-22, Organism=Drosophila melanogaster, GI18858081, Length=352, Percent_Identity=28.9772727272727, Blast_Score=97, Evalue=1e-20, Organism=Drosophila melanogaster, GI45549272, Length=68, Percent_Identity=58.8235294117647, Blast_Score=85, Evalue=5e-17, Organism=Drosophila melanogaster, GI45552813, Length=68, Percent_Identity=58.8235294117647, Blast_Score=85, Evalue=5e-17, Organism=Drosophila melanogaster, GI45552811, Length=68, Percent_Identity=58.8235294117647, Blast_Score=84, Evalue=8e-17, Organism=Drosophila melanogaster, GI24654066, Length=109, Percent_Identity=46.7889908256881, Blast_Score=80, Evalue=2e-15, Organism=Drosophila melanogaster, GI24654070, Length=109, Percent_Identity=46.7889908256881, Blast_Score=80, Evalue=2e-15, Organism=Drosophila melanogaster, GI24654068, Length=109, Percent_Identity=46.7889908256881, Blast_Score=80, Evalue=2e-15, Organism=Drosophila melanogaster, GI24654072, Length=109, Percent_Identity=46.7889908256881, Blast_Score=80, Evalue=2e-15, Organism=Drosophila melanogaster, GI24668492, Length=67, Percent_Identity=52.2388059701493, Blast_Score=79, Evalue=3e-15, Organism=Drosophila melanogaster, GI20129487, Length=137, Percent_Identity=36.4963503649635, Blast_Score=77, Evalue=1e-14, Organism=Drosophila melanogaster, GI24584014, Length=137, Percent_Identity=36.4963503649635, Blast_Score=77, Evalue=1e-14, Organism=Drosophila melanogaster, GI161077138, Length=66, Percent_Identity=56.0606060606061, Blast_Score=74, Evalue=1e-13, Organism=Drosophila melanogaster, GI19920464, Length=65, Percent_Identity=46.1538461538462, Blast_Score=70, Evalue=1e-12, Organism=Drosophila melanogaster, GI24584630, Length=69, Percent_Identity=50.7246376811594, Blast_Score=68, Evalue=6e-12, Organism=Drosophila melanogaster, GI21355911, Length=103, Percent_Identity=40.7766990291262, Blast_Score=68, Evalue=7e-12, Organism=Drosophila melanogaster, GI17648033, Length=69, Percent_Identity=50.7246376811594, Blast_Score=68, Evalue=7e-12, Organism=Drosophila melanogaster, GI21358273, Length=65, Percent_Identity=50.7692307692308, Blast_Score=68, Evalue=8e-12, Organism=Drosophila melanogaster, GI24641698, Length=65, Percent_Identity=41.5384615384615, Blast_Score=68, Evalue=9e-12, Organism=Drosophila melanogaster, GI24641696, Length=65, Percent_Identity=41.5384615384615, Blast_Score=68, Evalue=9e-12, Organism=Drosophila melanogaster, GI24646562, Length=62, Percent_Identity=53.2258064516129, Blast_Score=67, Evalue=2e-11, Organism=Drosophila melanogaster, GI24646560, Length=62, Percent_Identity=53.2258064516129, Blast_Score=67, Evalue=2e-11, Organism=Drosophila melanogaster, GI24646558, Length=62, Percent_Identity=53.2258064516129, Blast_Score=67, Evalue=2e-11, Organism=Drosophila melanogaster, GI24646556, Length=62, Percent_Identity=53.2258064516129, Blast_Score=67, Evalue=2e-11, Organism=Drosophila melanogaster, GI21357547, Length=62, Percent_Identity=53.2258064516129, Blast_Score=67, Evalue=2e-11, Organism=Drosophila melanogaster, GI24643180, Length=125, Percent_Identity=30.4, Blast_Score=64, Evalue=1e-10,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002939 - InterPro: IPR001623 - InterPro: IPR018253 - InterPro: IPR008971 - InterPro: IPR015609 - InterPro: IPR003095 [H]
Pfam domain/function: PF00226 DnaJ; PF01556 DnaJ_C [H]
EC number: NA
Molecular weight: Translated: 33322; Mature: 33322
Theoretical pI: Translated: 9.31; Mature: 9.31
Prosite motif: PS00636 DNAJ_1 ; PS50076 DNAJ_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDKDYYKIMGVSQDASEKDIKMAYRKLARKYHPDISKEPDAEERFKEMAEAYEVLKDPKK CCCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCHH RSEYDQYLKYKEFNPQNDGFTGRRTQEQPFQEFHFDSDFFETLFGHSRYQQQPMTGQNYH HHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHCCCHHHHHHHHCCHHHHCCCCCCCCCC GKITISLEEAYHGAVKNLQVPVEQGTETKMQTLKVKIPAGVKSGQQIRLAGQGGSGSGGG CEEEEEEHHHHHHHHHCCCCCCCCCCCCEEEEEEEEECCCCCCCCEEEEEECCCCCCCCC ARGDLYLTVEVIKHPIFDVMENDIYLTLPITPWEAALGATVVIPTLAGKIDLKIPPGSQG CCCEEEEEHHHHHHHHHHHHCCCEEEEEECCCHHHHHCCEEEEEECCCEEEEEECCCCCC GQKLRIKNRGLPGSPPGNQYVLLKIITPPAQTEEAKALYKKMAEVMPYNPRKTMGV CCEEEEECCCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure MDKDYYKIMGVSQDASEKDIKMAYRKLARKYHPDISKEPDAEERFKEMAEAYEVLKDPKK CCCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCHH RSEYDQYLKYKEFNPQNDGFTGRRTQEQPFQEFHFDSDFFETLFGHSRYQQQPMTGQNYH HHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHCCCHHHHHHHHCCHHHHCCCCCCCCCC GKITISLEEAYHGAVKNLQVPVEQGTETKMQTLKVKIPAGVKSGQQIRLAGQGGSGSGGG CEEEEEEHHHHHHHHHCCCCCCCCCCCCEEEEEEEEECCCCCCCCEEEEEECCCCCCCCC ARGDLYLTVEVIKHPIFDVMENDIYLTLPITPWEAALGATVVIPTLAGKIDLKIPPGSQG CCCEEEEEHHHHHHHHHHHHCCCEEEEEECCCHHHHHCCEEEEEECCCEEEEEECCCCCC GQKLRIKNRGLPGSPPGNQYVLLKIITPPAQTEEAKALYKKMAEVMPYNPRKTMGV CCEEEEECCCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA