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The map label for this gene is cybA [H]

Identifier: 148359182

GI number: 148359182

Start: 1890035

End: 1890565

Strand: Reverse

Name: cybA [H]

Synonym: LPC_1076

Alternate gene names: 148359182

Gene position: 1890565-1890035 (Counterclockwise)

Preceding gene: 148359183

Following gene: 148359181

Centisome position: 52.86

GC content: 37.66

Gene sequence:

>531_bases
ATGCAATTAAAAAATACTTCAACCAGCTTTGGTCTGGTTGCGATTTTTTTCCATTGGATTATGGCCGCTTTAATTATTGG
GCTATTGGGAGTGGGTTTATACATGGTCAGGATCCCTATTAGTCTTGAGAAATTAAAATTATATGGTTGGCATAAGGAGT
ACGGATTTCTGGTATTGTTTTTGGCTTTTTTCAGATTGATTTGGCGTTTGACTAATCAATTACCGGAATTGGCTATTCCC
CTGTTAGAGAAAATTGCAGCTCGCAGCATGCACTGGGCTTTTTATTTTTTCATGTTTGCTATGCCCTTCAGTGGATGGCT
AATTACCTCGGCTGCAGGATTGCCTGCTTCTTTTTTTGGTTTATTTGTTTTACCTGACCTTGTTGCACCCGATGAGAATA
GAAGAATTTTGTTCCAATTGATTCATGAATGGTTGGGGTATGCATTAATTATGGCCATAATCCTGCATGCAGCGGCAGCA
TTAAAACATCATTTTATTAATAAGGATGATATATTACGGAGAATGTTATAG

Upstream 100 bases:

>100_bases
TTCTGATTATGGAATAAAAGCTTTAATACCAGAAGTAGGAGATGATGTTGAAATAGAAATAGAAGCAGAAGCCTATCTTG
ATAAGAAATATGGATAATCT

Downstream 100 bases:

>100_bases
TGAATGTCTATATTAAATCTTCCCTTTGGGTATTGATATTTTTTGTAAATACATTGACTTATGCCAGTAAACTCCCTGAA
TGGGAAATCGTGCCAGCACA

Product: cytochrome b561 transmembrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 176; Mature: 176

Protein sequence:

>176_residues
MQLKNTSTSFGLVAIFFHWIMAALIIGLLGVGLYMVRIPISLEKLKLYGWHKEYGFLVLFLAFFRLIWRLTNQLPELAIP
LLEKIAARSMHWAFYFFMFAMPFSGWLITSAAGLPASFFGLFVLPDLVAPDENRRILFQLIHEWLGYALIMAIILHAAAA
LKHHFINKDDILRRML

Sequences:

>Translated_176_residues
MQLKNTSTSFGLVAIFFHWIMAALIIGLLGVGLYMVRIPISLEKLKLYGWHKEYGFLVLFLAFFRLIWRLTNQLPELAIP
LLEKIAARSMHWAFYFFMFAMPFSGWLITSAAGLPASFFGLFVLPDLVAPDENRRILFQLIHEWLGYALIMAIILHAAAA
LKHHFINKDDILRRML
>Mature_176_residues
MQLKNTSTSFGLVAIFFHWIMAALIIGLLGVGLYMVRIPISLEKLKLYGWHKEYGFLVLFLAFFRLIWRLTNQLPELAIP
LLEKIAARSMHWAFYFFMFAMPFSGWLITSAAGLPASFFGLFVLPDLVAPDENRRILFQLIHEWLGYALIMAIILHAAAA
LKHHFINKDDILRRML

Specific function: Unknown

COG id: COG3038

COG function: function code C; Cytochrome B561

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cytochrome b561 family [H]

Homologues:

Organism=Escherichia coli, GI1787296, Length=186, Percent_Identity=34.4086021505376, Blast_Score=110, Evalue=7e-26,
Organism=Escherichia coli, GI87082013, Length=186, Percent_Identity=31.1827956989247, Blast_Score=60, Evalue=9e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005797
- InterPro:   IPR016174 [H]

Pfam domain/function: PF00033 Cytochrom_B_N [H]

EC number: NA

Molecular weight: Translated: 20327; Mature: 20327

Theoretical pI: Translated: 10.16; Mature: 10.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQLKNTSTSFGLVAIFFHWIMAALIIGLLGVGLYMVRIPISLEKLKLYGWHKEYGFLVLF
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHH
LAFFRLIWRLTNQLPELAIPLLEKIAARSMHWAFYFFMFAMPFSGWLITSAAGLPASFFG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCHHHHH
LFVLPDLVAPDENRRILFQLIHEWLGYALIMAIILHAAAALKHHFINKDDILRRML
HHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHC
>Mature Secondary Structure
MQLKNTSTSFGLVAIFFHWIMAALIIGLLGVGLYMVRIPISLEKLKLYGWHKEYGFLVLF
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHH
LAFFRLIWRLTNQLPELAIPLLEKIAARSMHWAFYFFMFAMPFSGWLITSAAGLPASFFG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCHHHHH
LFVLPDLVAPDENRRILFQLIHEWLGYALIMAIILHAAAALKHHFINKDDILRRML
HHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]