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The map label for this gene is 148358460

Identifier: 148358460

GI number: 148358460

Start: 350094

End: 351245

Strand: Reverse

Name: 148358460

Synonym: LPC_0326

Alternate gene names: NA

Gene position: 351245-350094 (Counterclockwise)

Preceding gene: 148358461

Following gene: 148358456

Centisome position: 9.82

GC content: 39.84

Gene sequence:

>1152_bases
ATGTTTGGTTTTTTAAATATGACTTTATGGGGATATCTTTTGACCGGTTTTGTCCTGACTCACATCACCACCACTGCTGT
TACCATTTACCTGCATCGCTACCAGACACACCGCGCATTAACTCTGCATCCTCTTGTCAGCCATTTTTTCCGTTTCTGGC
TTTGGTTAACGACCGGAATGACCACTGCGGAATGGGTAGCGATTCATCGGAAACATCATGCCAATACTGACATGGAAGGG
GATCCTCATAGTCCTCAGGTATTTAATATAAGAAAAGTATTTTGGCAGGTTCCAGAGTTATACCGAGAAGCCTCTAAAGA
TAAAGACATGATTAAAAAATACTCCTATGGTACCCCCAACGACTGGATAGAGCGCAAATTATACTCTCCCCATGCGAACA
AAGGCATATTTTTAATGCTCGCACTTAATCTTTTCTTGTTTGGAATTCCTGGACTTACCCTTTGGGCAATCCAAATGATG
TGGATACCTCTTGTTGCTGGCGTGGTCAATGGAATAGGGCATTATTGGGGTTATCGAAATCATGAATCGTCAGATTCTTC
AACCAATGTTTTTCCCTGGGGTTTATTGATTGCTGGTGAAGAATTGCATAATAATCATCATACCTTCGCCTCCTCAGCCA
AATTTTCCATTAAATGGTGGGAATTTGATTTGGGCTGGTTTTACATACGTTGTTTGTCTTTTTTAAAACTCGCCAAAGTA
AAAAAATTACCCCCAAAACTGATCATTGACAAGAATAAATCTCATATAGATGTAGATTCGGTAAAAGCCATACTTGGCAA
TCGCTTTCAAGTGATATCTGATTATTACAAGCTGGTTATATTTCCTACTCTGCGCGATATGCAATACCGCATAAAAAATC
GGGATTTAAAGAATGCTCGCCATTTACTCAAGAAACCGAATGAACAGCTATCCCATGCTGATCAGTTGCGATTGAAAACG
TTACTCAAGCAACATGACAACTTGCAAGCGGTTCATAATTACCGCGAATTATTACAGCAGATATGGCTAAAAACGTCCCT
ATCCAATAAGGATCTTCTTAATTTAATACAAAAATGGTGTAGCCAGGCCGAAGAGTCCGGACTGCTTGTGTTAAGGCAAT
TTGCATCACAATTAAAAAGCTATTCTCTCTGA

Upstream 100 bases:

>100_bases
ACTAAGATAAAAATAAATAGTATATACTTAGTGGATATAGAGATATTCTTACATATCGTTTTGCCAATTACACAATTTTA
GGCACCTAAAAGGAGAAATG

Downstream 100 bases:

>100_bases
AGTTTTGCAAATGCTTTTATTCCTTACCATGACAGTGAGATTAGTCATGGTATCAGGATTAATTTATATTATCGTACAAT
AAAGACTAATCAAACAGCTC

Product: stearoyl CoA 9-desaturase

Products: NA

Alternate protein names: Stearoyl-CoA 9-Desaturase; Delta-9 Acyl-Phospholipid Desaturase; Fatty-Acid Desaturase; Delta-9 Desaturase; Fatty Acid Desaturase Family Protein; Fatty Acid Desaturase Subfamily; Stearoyl-CoA Desaturase; Delta 9 Acyl-Lipid Fatty Acid Desaturase; Palmitoyl-Monogalactosyldiacylglycerol Delta-7 Desaturase; Acyl-CoA Desaturase; Delta-9 Acyl-Lipid Desaturase; Fatty Acid Desaturase Family Proteiin; Stearoyl-CoA Desaturase Oxidoreductase; Fatty-Acid Desaturase Transmenbrane Protein; Delta-9 Fatty Ac Id Desaturase; Stearoyl-CoA Desaturase Oxidoreductase Protein; Transmembrane Fatty Acid Desaturase; Fatty Acid Desaturase Family; Syn-2 Delta 9 Acyl-Lipid Fatty Acid Desaturase; Desaturase-Like; Stearoyl-CoA-9-Desaturase; Delta 9 Acyl-Lipid Desaturase

Number of amino acids: Translated: 383; Mature: 383

Protein sequence:

>383_residues
MFGFLNMTLWGYLLTGFVLTHITTTAVTIYLHRYQTHRALTLHPLVSHFFRFWLWLTTGMTTAEWVAIHRKHHANTDMEG
DPHSPQVFNIRKVFWQVPELYREASKDKDMIKKYSYGTPNDWIERKLYSPHANKGIFLMLALNLFLFGIPGLTLWAIQMM
WIPLVAGVVNGIGHYWGYRNHESSDSSTNVFPWGLLIAGEELHNNHHTFASSAKFSIKWWEFDLGWFYIRCLSFLKLAKV
KKLPPKLIIDKNKSHIDVDSVKAILGNRFQVISDYYKLVIFPTLRDMQYRIKNRDLKNARHLLKKPNEQLSHADQLRLKT
LLKQHDNLQAVHNYRELLQQIWLKTSLSNKDLLNLIQKWCSQAEESGLLVLRQFASQLKSYSL

Sequences:

>Translated_383_residues
MFGFLNMTLWGYLLTGFVLTHITTTAVTIYLHRYQTHRALTLHPLVSHFFRFWLWLTTGMTTAEWVAIHRKHHANTDMEG
DPHSPQVFNIRKVFWQVPELYREASKDKDMIKKYSYGTPNDWIERKLYSPHANKGIFLMLALNLFLFGIPGLTLWAIQMM
WIPLVAGVVNGIGHYWGYRNHESSDSSTNVFPWGLLIAGEELHNNHHTFASSAKFSIKWWEFDLGWFYIRCLSFLKLAKV
KKLPPKLIIDKNKSHIDVDSVKAILGNRFQVISDYYKLVIFPTLRDMQYRIKNRDLKNARHLLKKPNEQLSHADQLRLKT
LLKQHDNLQAVHNYRELLQQIWLKTSLSNKDLLNLIQKWCSQAEESGLLVLRQFASQLKSYSL
>Mature_383_residues
MFGFLNMTLWGYLLTGFVLTHITTTAVTIYLHRYQTHRALTLHPLVSHFFRFWLWLTTGMTTAEWVAIHRKHHANTDMEG
DPHSPQVFNIRKVFWQVPELYREASKDKDMIKKYSYGTPNDWIERKLYSPHANKGIFLMLALNLFLFGIPGLTLWAIQMM
WIPLVAGVVNGIGHYWGYRNHESSDSSTNVFPWGLLIAGEELHNNHHTFASSAKFSIKWWEFDLGWFYIRCLSFLKLAKV
KKLPPKLIIDKNKSHIDVDSVKAILGNRFQVISDYYKLVIFPTLRDMQYRIKNRDLKNARHLLKKPNEQLSHADQLRLKT
LLKQHDNLQAVHNYRELLQQIWLKTSLSNKDLLNLIQKWCSQAEESGLLVLRQFASQLKSYSL

Specific function: Unknown

COG id: COG1398

COG function: function code I; Fatty-acid desaturase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 44979; Mature: 44979

Theoretical pI: Translated: 10.19; Mature: 10.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFGFLNMTLWGYLLTGFVLTHITTTAVTIYLHRYQTHRALTLHPLVSHFFRFWLWLTTGM
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHCCC
TTAEWVAIHRKHHANTDMEGDPHSPQVFNIRKVFWQVPELYREASKDKDMIKKYSYGTPN
CHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCH
DWIERKLYSPHANKGIFLMLALNLFLFGIPGLTLWAIQMMWIPLVAGVVNGIGHYWGYRN
HHHHHHHCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
HESSDSSTNVFPWGLLIAGEELHNNHHTFASSAKFSIKWWEFDLGWFYIRCLSFLKLAKV
CCCCCCCCCCCCEEEEEECHHHHCCCCCHHCCCEEEEEEEEECHHHHHHHHHHHHHHHHH
KKLPPKLIIDKNKSHIDVDSVKAILGNRFQVISDYYKLVIFPTLRDMQYRIKNRDLKNAR
HCCCCCEEEECCCCCCCHHHHHHHHCCHHHHHHHHHHHEEEHHHHHHHHHHHCCCHHHHH
HLLKKPNEQLSHADQLRLKTLLKQHDNLQAVHNYRELLQQIWLKTSLSNKDLLNLIQKWC
HHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
SQAEESGLLVLRQFASQLKSYSL
HHHHHCCHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MFGFLNMTLWGYLLTGFVLTHITTTAVTIYLHRYQTHRALTLHPLVSHFFRFWLWLTTGM
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHCCC
TTAEWVAIHRKHHANTDMEGDPHSPQVFNIRKVFWQVPELYREASKDKDMIKKYSYGTPN
CHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCH
DWIERKLYSPHANKGIFLMLALNLFLFGIPGLTLWAIQMMWIPLVAGVVNGIGHYWGYRN
HHHHHHHCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
HESSDSSTNVFPWGLLIAGEELHNNHHTFASSAKFSIKWWEFDLGWFYIRCLSFLKLAKV
CCCCCCCCCCCCEEEEEECHHHHCCCCCHHCCCEEEEEEEEECHHHHHHHHHHHHHHHHH
KKLPPKLIIDKNKSHIDVDSVKAILGNRFQVISDYYKLVIFPTLRDMQYRIKNRDLKNAR
HCCCCCEEEECCCCCCCHHHHHHHHCCHHHHHHHHHHHEEEHHHHHHHHHHHCCCHHHHH
HLLKKPNEQLSHADQLRLKTLLKQHDNLQAVHNYRELLQQIWLKTSLSNKDLLNLIQKWC
HHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
SQAEESGLLVLRQFASQLKSYSL
HHHHHCCHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA