Click here to switch to the map view.

The map label for this gene is 148358387

Identifier: 148358387

GI number: 148358387

Start: 261448

End: 262203

Strand: Reverse

Name: 148358387

Synonym: LPC_0251

Alternate gene names: NA

Gene position: 262203-261448 (Counterclockwise)

Preceding gene: 148358388

Following gene: 148358386

Centisome position: 7.33

GC content: 35.19

Gene sequence:

>756_bases
ATGTATGTTTTTCGCCGTTTTTCGAAGCATATTATTACTTTTCTCCATTCGCTTGAGCTCGCTTTTCGATTTTTAGGCCA
TTTGGTTGATAGCACTATCAAAGTTATTTTTGGCAAACTGTCCATCGTCTGGCCTAACACACTAGAAATGATTTACTATT
CTGGAGCGAGGCTTGTTATTCTACTGAGTTTTATTGGTATATTATTAGGCGCTACTGTTTCACAAACGGTTTATGCGCTC
TTAAAACCTTTTCAGCTACATCAACGAGTACTTCCCATTGTTCAAAATATTTTAACTCATGAAATATTACCGGTACTTAT
TGGCTTCATTTTATGTATCCAAGCCGCCTTGCATATGGTTAACACCCGTTTGGAGCATTACCAGGAGAACCCAGAGGCAA
TTATCCTTGCTCAAGTATTACCAATCATTGTAGGTATGAACATTGCCTCCTTACTATTATATGTTTATCTTGTATCCGCT
ATTTTTTTTAGTTTTTATCTCACTTTTCATTTTATGTTAGGGTTTACAAACAATGAATTTTTATCCTATGTTGTCAGCTC
GACAACCTTATTTGATCTGATATACTCGGTCGTTAAGACATTGATTTTATGCATCATAGTTGGGTTGACTTCTGGTTATT
ATTATTATGAAGCATCTATTAGACATATTTATTTGAGAAAAGCAGTTTCTCGAATTTTAACGCGTGGCTCATTCTGGCTG
ATCATTGCCAGTATGTATATTACTCTTACGTTTTAG

Upstream 100 bases:

>100_bases
TTAAGTTAAGAATTAACTTCTTTTTGCCTGATACAAGCATCTTGCTAACGAAGCTATTATTCTTGTCGTGGCATTTTGAA
AGAGGACTAATGGATTAGCC

Downstream 100 bases:

>100_bases
GGACGACGTGCATAACGAACGATTCTATACATTAGTGGGTATTTTTATAGTAGGCGCCCTATGTTTAATGATTCTAGGCG
GTACTTTTTTTTATATAGAA

Product: putative ABC transport system permease

Products: NA

Alternate protein names: ABC Transporter

Number of amino acids: Translated: 251; Mature: 251

Protein sequence:

>251_residues
MYVFRRFSKHIITFLHSLELAFRFLGHLVDSTIKVIFGKLSIVWPNTLEMIYYSGARLVILLSFIGILLGATVSQTVYAL
LKPFQLHQRVLPIVQNILTHEILPVLIGFILCIQAALHMVNTRLEHYQENPEAIILAQVLPIIVGMNIASLLLYVYLVSA
IFFSFYLTFHFMLGFTNNEFLSYVVSSTTLFDLIYSVVKTLILCIIVGLTSGYYYYEASIRHIYLRKAVSRILTRGSFWL
IIASMYITLTF

Sequences:

>Translated_251_residues
MYVFRRFSKHIITFLHSLELAFRFLGHLVDSTIKVIFGKLSIVWPNTLEMIYYSGARLVILLSFIGILLGATVSQTVYAL
LKPFQLHQRVLPIVQNILTHEILPVLIGFILCIQAALHMVNTRLEHYQENPEAIILAQVLPIIVGMNIASLLLYVYLVSA
IFFSFYLTFHFMLGFTNNEFLSYVVSSTTLFDLIYSVVKTLILCIIVGLTSGYYYYEASIRHIYLRKAVSRILTRGSFWL
IIASMYITLTF
>Mature_251_residues
MYVFRRFSKHIITFLHSLELAFRFLGHLVDSTIKVIFGKLSIVWPNTLEMIYYSGARLVILLSFIGILLGATVSQTVYAL
LKPFQLHQRVLPIVQNILTHEILPVLIGFILCIQAALHMVNTRLEHYQENPEAIILAQVLPIIVGMNIASLLLYVYLVSA
IFFSFYLTFHFMLGFTNNEFLSYVVSSTTLFDLIYSVVKTLILCIIVGLTSGYYYYEASIRHIYLRKAVSRILTRGSFWL
IIASMYITLTF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28838; Mature: 28838

Theoretical pI: Translated: 9.47; Mature: 9.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHCC
>Mature Secondary Structure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HHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA