Click here to switch to the map view.

The map label for this gene is 148358354

Identifier: 148358354

GI number: 148358354

Start: 232516

End: 233283

Strand: Reverse

Name: 148358354

Synonym: LPC_0218

Alternate gene names: NA

Gene position: 233283-232516 (Counterclockwise)

Preceding gene: 148358362

Following gene: 148358353

Centisome position: 6.52

GC content: 31.38

Gene sequence:

>768_bases
ATGCGAATAAAACGAAAAATTATACGACATGGTTTTTTTTGGTTGCCTAACTCCAAAAAAGAAGTAAAGGGAACTCTAAT
AATTCTTGATGGAGGCAAAATCAGTTTACGACTAGAGAATTTACTGCATCCACAAAATGAATTAATTAAGATTATTCATG
GTCGTATTGGAGAAACAGCCATAACGTTAGTGGACTCATATTGTAAAGTTTATAATGATTTGATTAGCATGATATCTGGC
GGATACGGCTTTGAAATGCATGTTCATGAGGCTATTTTTGGTCAATTTTTTCCATCCGAAGAAATTACTACTGTGGAGGT
GTATTTTTGGCTTGAGGGAATTGATAATTGGATAAATGAAATAAACCATCTAGATGTGAGTAACAAATTAAATATAAGTA
AAGATTATAATTTCATTTTGCAAAAACACGCGGGCGGAATCAAATTTAAACTGTCATCACATAATCCCCAACTATTATCT
GAATATCGTAAAATTATCCAAAAAATCATTTTATTTTTTTATTTTATTTTGAATAAGCCAACTAATTTACAAAAGATAAT
AATAAAATCAGCTGGAAATAAAAAACTTCCTATTTATTACCAATCTATTCCATTTAACCATAAAAAATATCCATCAAAAA
GTGGCTTCATACAACCTGGGGACATTGACAATCTTCCAAGGATTATTGAAAACTGGTTTAATTTTTATGACTCCTATTCC
CCTTGTGTATTCCGGAGCGAAATGATCACCGATTCCGGCCACACTTGA

Upstream 100 bases:

>100_bases
TTCAAATAATTTGTAAGGCACAAATTGTGAATTTAGAAGAGGCTTATTTAAGATAACAAACCGCTATACTTAAGAGTAGA
AGATTTGATTGGAATCATGA

Downstream 100 bases:

>100_bases
TCACTCATTCCGGAAACACTTGATCAGTGATTCCGGCACTACTTGATCACCGATTCCGGAGCATTTGATCAGTGATTCCG
ACCTCATTTGATCACCTTCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 255; Mature: 255

Protein sequence:

>255_residues
MRIKRKIIRHGFFWLPNSKKEVKGTLIILDGGKISLRLENLLHPQNELIKIIHGRIGETAITLVDSYCKVYNDLISMISG
GYGFEMHVHEAIFGQFFPSEEITTVEVYFWLEGIDNWINEINHLDVSNKLNISKDYNFILQKHAGGIKFKLSSHNPQLLS
EYRKIIQKIILFFYFILNKPTNLQKIIIKSAGNKKLPIYYQSIPFNHKKYPSKSGFIQPGDIDNLPRIIENWFNFYDSYS
PCVFRSEMITDSGHT

Sequences:

>Translated_255_residues
MRIKRKIIRHGFFWLPNSKKEVKGTLIILDGGKISLRLENLLHPQNELIKIIHGRIGETAITLVDSYCKVYNDLISMISG
GYGFEMHVHEAIFGQFFPSEEITTVEVYFWLEGIDNWINEINHLDVSNKLNISKDYNFILQKHAGGIKFKLSSHNPQLLS
EYRKIIQKIILFFYFILNKPTNLQKIIIKSAGNKKLPIYYQSIPFNHKKYPSKSGFIQPGDIDNLPRIIENWFNFYDSYS
PCVFRSEMITDSGHT
>Mature_255_residues
MRIKRKIIRHGFFWLPNSKKEVKGTLIILDGGKISLRLENLLHPQNELIKIIHGRIGETAITLVDSYCKVYNDLISMISG
GYGFEMHVHEAIFGQFFPSEEITTVEVYFWLEGIDNWINEINHLDVSNKLNISKDYNFILQKHAGGIKFKLSSHNPQLLS
EYRKIIQKIILFFYFILNKPTNLQKIIIKSAGNKKLPIYYQSIPFNHKKYPSKSGFIQPGDIDNLPRIIENWFNFYDSYS
PCVFRSEMITDSGHT

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29703; Mature: 29703

Theoretical pI: Translated: 9.60; Mature: 9.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRIKRKIIRHGFFWLPNSKKEVKGTLIILDGGKISLRLENLLHPQNELIKIIHGRIGETA
CCHHHHHHHCCCEECCCCCCCCCEEEEEEECCEEEEEEHHHCCCHHHHHHHHHCCCCHHH
ITLVDSYCKVYNDLISMISGGYGFEMHVHEAIFGQFFPSEEITTVEVYFWLEGIDNWINE
HHHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHCCCCCCCEEEEEEEEHHHHHHHHHH
INHLDVSNKLNISKDYNFILQKHAGGIKFKLSSHNPQLLSEYRKIIQKIILFFYFILNKP
HHCCCCCCCCCCCCCHHHHEEECCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCC
TNLQKIIIKSAGNKKLPIYYQSIPFNHKKYPSKSGFIQPGDIDNLPRIIENWFNFYDSYS
CCHHEEEEECCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCC
PCVFRSEMITDSGHT
CCEEHHHHHCCCCCC
>Mature Secondary Structure
MRIKRKIIRHGFFWLPNSKKEVKGTLIILDGGKISLRLENLLHPQNELIKIIHGRIGETA
CCHHHHHHHCCCEECCCCCCCCCEEEEEEECCEEEEEEHHHCCCHHHHHHHHHCCCCHHH
ITLVDSYCKVYNDLISMISGGYGFEMHVHEAIFGQFFPSEEITTVEVYFWLEGIDNWINE
HHHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHCCCCCCCEEEEEEEEHHHHHHHHHH
INHLDVSNKLNISKDYNFILQKHAGGIKFKLSSHNPQLLSEYRKIIQKIILFFYFILNKP
HHCCCCCCCCCCCCCHHHHEEECCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCC
TNLQKIIIKSAGNKKLPIYYQSIPFNHKKYPSKSGFIQPGDIDNLPRIIENWFNFYDSYS
CCHHEEEEECCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCC
PCVFRSEMITDSGHT
CCEEHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA