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The map label for this gene is htpX [H]

Identifier: 148358342

GI number: 148358342

Start: 219385

End: 221175

Strand: Reverse

Name: htpX [H]

Synonym: LPC_0205

Alternate gene names: 148358342

Gene position: 221175-219385 (Counterclockwise)

Preceding gene: 148358343

Following gene: 148358338

Centisome position: 6.18

GC content: 41.71

Gene sequence:

>1791_bases
ATGAACATATATGGACTTGTGAAAGTATTTCTAGTTGCTTTGGTAATTCCTGCCATTGGCTTTGCGGTCAGCTTCTTTAT
CATTAATGACGTGAATCAGTCATTGAAATCAAAAGGAATCGGAGATGTAACCCTATTTTGCGAAGTCCTGCAATCTGGTC
AACTTGAGAAAAAGGCAACAGCCGAACTCCAAGAGGCCTGCCAAGAAGTGACGAATATTGTATTGCTTGGGCAGGGAAGT
GTGATAACAGCAGCAATAGGAATTCTGATCCCAGTACTTTACTGGTTAGCATCAATAATCACTGGTGAAAGTAGAAAGAG
AATTGCTCTGCTGTTTCCTATTGTACTTCGTATCTCGGTCTTGTTAATTGCGATATCTGTATTGCTCCAAGGTGCAATTC
TTACATATGCAGTATATATTGGTGAATCCTATTTTTACGGACGCATTCATCCTGTCCTTATTGGCCTTATAGGGCTTGGA
GCGCTCATCGGGGGACTAAGTCTTATCGTAGTTGCTATGAGTTTTGGTAGGAAACTTAAATTGAGTACGATGGGAAAAGT
TCTCGCAGCCTCAGATGCACCGCAACTTTTCAGATTTGTTCGTTCGCTTGCGGAAAAGCTAGGCGCAAAAGAGCCCCAAA
ATATCATCGTGGGATTAGAACCAACCTTCTATGTTACAAATAGCGATATTCAAGTCCCAGGGTATGAGAAACAAATAACT
GGAGAAACGCTCTACATTTCTGCACCATTAGCAAGGCTGCTGTCGAAAGAAGAGTTTGCATCAGTTGTAGGGCATGAATT
AGGACATTTCCGAGGAAATGATACCATTTATAGTATGCGATTTGCTCCTGTTTATGCTGGTTTAGGGATGGCGCTAGGAG
CACTTGCAATAGATGAGAATGAAGGTGCTAGTGGACTCGCCAAAGTACCGGCAATCGCAATGCTTTCCTATATGTATGAA
TTATTTTCTACCAATGTGGCAAAGATTAGTCGTGATCGGGAGCATAAAGCAGATGAAGCTGGGGCAGAAGCAGGGTCTGC
TTTGGCACTTGCCACAGCTCTAATCAAGGTTTCTCTTTACTCAAGCCTTTGGAACCATGCACGTCAAGAAAATATTGAAC
GACTCAATCAAGGCAAGATAGCAACAAATCTGAGTATTGTATTTCAGGATACAGCTAAGTACGACATTGAGCATGAAAAC
ATAGAGCAGATTATGAAATCGACTCTGGAGCAATCAATTTCTCATCCAACGGATAACCACCCGTCTGTATCATTACGTCT
TAAGGCATTGGGAGTTAACACAGAAACAATTACAAAAGATATGCTGCTTATTCCAGAAGATGCGGCGATACATTTGCTGG
ATAAATCCCAAAAAATTGAAGAAGAGATAACTCTCTTAGAACATAAACTCATGATAGCTTACGGTGTTGCCAGCCCACCT
AAGGAAGCAGAGCGGAATCATTTGTTACATGCCACATATTCACTCGCAGCGGCAATGATTTCGGCTGATGGAAGAGTTGA
TCTCGGTGAAGTGGCGGTCGCAGAAGGGATCGGAAAAAAATTATTTGAAGATTTTGACTCGATAGAATTCCGCGAATATT
GCAACAACCCTGAGCAAATACCCGATGTAGTGCAGCTCTCCGAAGCAATGAAAGAAATATTGGAGGATGAGCATAAATAT
CTGATTATCCAATATCTGAAAGCTATATCTGAAACGGATGGTAGTGTATCCAAGGATGAGGAACTCTTGCTCCAGAAAGT
AGCTTCTGGTTTGGGTATTTCTATCACATAA

Upstream 100 bases:

>100_bases
TCAAATTAAAAGTAAATCTTGCACTATACTTTTTCTAAATGGAAACAAATTATCGTTGCCTCGTGATCGATGACGAAAGG
TATTAAGAACTGGGGAAGCA

Downstream 100 bases:

>100_bases
CCCAAACGTAGTGTAGGAGGGAAAGTTATTTTGTCATGAAGTAGTCCCCCATTTAGCCATCTCATAATCATCGACTTGTA
GCCTTAATGGCAGTTTTATA

Product: protease HtpX-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 596; Mature: 596

Protein sequence:

>596_residues
MNIYGLVKVFLVALVIPAIGFAVSFFIINDVNQSLKSKGIGDVTLFCEVLQSGQLEKKATAELQEACQEVTNIVLLGQGS
VITAAIGILIPVLYWLASIITGESRKRIALLFPIVLRISVLLIAISVLLQGAILTYAVYIGESYFYGRIHPVLIGLIGLG
ALIGGLSLIVVAMSFGRKLKLSTMGKVLAASDAPQLFRFVRSLAEKLGAKEPQNIIVGLEPTFYVTNSDIQVPGYEKQIT
GETLYISAPLARLLSKEEFASVVGHELGHFRGNDTIYSMRFAPVYAGLGMALGALAIDENEGASGLAKVPAIAMLSYMYE
LFSTNVAKISRDREHKADEAGAEAGSALALATALIKVSLYSSLWNHARQENIERLNQGKIATNLSIVFQDTAKYDIEHEN
IEQIMKSTLEQSISHPTDNHPSVSLRLKALGVNTETITKDMLLIPEDAAIHLLDKSQKIEEEITLLEHKLMIAYGVASPP
KEAERNHLLHATYSLAAAMISADGRVDLGEVAVAEGIGKKLFEDFDSIEFREYCNNPEQIPDVVQLSEAMKEILEDEHKY
LIIQYLKAISETDGSVSKDEELLLQKVASGLGISIT

Sequences:

>Translated_596_residues
MNIYGLVKVFLVALVIPAIGFAVSFFIINDVNQSLKSKGIGDVTLFCEVLQSGQLEKKATAELQEACQEVTNIVLLGQGS
VITAAIGILIPVLYWLASIITGESRKRIALLFPIVLRISVLLIAISVLLQGAILTYAVYIGESYFYGRIHPVLIGLIGLG
ALIGGLSLIVVAMSFGRKLKLSTMGKVLAASDAPQLFRFVRSLAEKLGAKEPQNIIVGLEPTFYVTNSDIQVPGYEKQIT
GETLYISAPLARLLSKEEFASVVGHELGHFRGNDTIYSMRFAPVYAGLGMALGALAIDENEGASGLAKVPAIAMLSYMYE
LFSTNVAKISRDREHKADEAGAEAGSALALATALIKVSLYSSLWNHARQENIERLNQGKIATNLSIVFQDTAKYDIEHEN
IEQIMKSTLEQSISHPTDNHPSVSLRLKALGVNTETITKDMLLIPEDAAIHLLDKSQKIEEEITLLEHKLMIAYGVASPP
KEAERNHLLHATYSLAAAMISADGRVDLGEVAVAEGIGKKLFEDFDSIEFREYCNNPEQIPDVVQLSEAMKEILEDEHKY
LIIQYLKAISETDGSVSKDEELLLQKVASGLGISIT
>Mature_596_residues
MNIYGLVKVFLVALVIPAIGFAVSFFIINDVNQSLKSKGIGDVTLFCEVLQSGQLEKKATAELQEACQEVTNIVLLGQGS
VITAAIGILIPVLYWLASIITGESRKRIALLFPIVLRISVLLIAISVLLQGAILTYAVYIGESYFYGRIHPVLIGLIGLG
ALIGGLSLIVVAMSFGRKLKLSTMGKVLAASDAPQLFRFVRSLAEKLGAKEPQNIIVGLEPTFYVTNSDIQVPGYEKQIT
GETLYISAPLARLLSKEEFASVVGHELGHFRGNDTIYSMRFAPVYAGLGMALGALAIDENEGASGLAKVPAIAMLSYMYE
LFSTNVAKISRDREHKADEAGAEAGSALALATALIKVSLYSSLWNHARQENIERLNQGKIATNLSIVFQDTAKYDIEHEN
IEQIMKSTLEQSISHPTDNHPSVSLRLKALGVNTETITKDMLLIPEDAAIHLLDKSQKIEEEITLLEHKLMIAYGVASPP
KEAERNHLLHATYSLAAAMISADGRVDLGEVAVAEGIGKKLFEDFDSIEFREYCNNPEQIPDVVQLSEAMKEILEDEHKY
LIIQYLKAISETDGSVSKDEELLLQKVASGLGISIT

Specific function: Unknown

COG id: COG0501

COG function: function code O; Zn-dependent protease with chaperone function

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M48B family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022919
- InterPro:   IPR001915 [H]

Pfam domain/function: PF01435 Peptidase_M48 [H]

EC number: NA

Molecular weight: Translated: 64887; Mature: 64887

Theoretical pI: Translated: 5.04; Mature: 5.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNIYGLVKVFLVALVIPAIGFAVSFFIINDVNQSLKSKGIGDVTLFCEVLQSGQLEKKAT
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCHHHH
AELQEACQEVTNIVLLGQGSVITAAIGILIPVLYWLASIITGESRKRIALLFPIVLRISV
HHHHHHHHHHHCEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH
LLIAISVLLQGAILTYAVYIGESYFYGRIHPVLIGLIGLGALIGGLSLIVVAMSFGRKLK
HHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEE
LSTMGKVLAASDAPQLFRFVRSLAEKLGAKEPQNIIVGLEPTFYVTNSDIQVPGYEKQIT
HHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCEEEECCCEEEEECCCEECCCCCCCCC
GETLYISAPLARLLSKEEFASVVGHELGHFRGNDTIYSMRFAPVYAGLGMALGALAIDEN
CCEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEHHHHHHHHHHHHHHHEEECC
EGASGLAKVPAIAMLSYMYELFSTNVAKISRDREHKADEAGAEAGSALALATALIKVSLY
CCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHCCCCCHHHHHHHHHHHHHHH
SSLWNHARQENIERLNQGKIATNLSIVFQDTAKYDIEHENIEQIMKSTLEQSISHPTDNH
HHHHHHHHHHHHHHHHCCCEEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCCCC
PSVSLRLKALGVNTETITKDMLLIPEDAAIHLLDKSQKIEEEITLLEHKLMIAYGVASPP
CCEEEEEEEECCCHHHHHHCEEECCCCCCEEECCCHHHHHHHHHHHHHHHHHEECCCCCC
KEAERNHLLHATYSLAAAMISADGRVDLGEVAVAEGIGKKLFEDFDSIEFREYCNNPEQI
CHHHHCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHCCCHHCC
PDVVQLSEAMKEILEDEHKYLIIQYLKAISETDGSVSKDEELLLQKVASGLGISIT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MNIYGLVKVFLVALVIPAIGFAVSFFIINDVNQSLKSKGIGDVTLFCEVLQSGQLEKKAT
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCHHHH
AELQEACQEVTNIVLLGQGSVITAAIGILIPVLYWLASIITGESRKRIALLFPIVLRISV
HHHHHHHHHHHCEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH
LLIAISVLLQGAILTYAVYIGESYFYGRIHPVLIGLIGLGALIGGLSLIVVAMSFGRKLK
HHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEE
LSTMGKVLAASDAPQLFRFVRSLAEKLGAKEPQNIIVGLEPTFYVTNSDIQVPGYEKQIT
HHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCEEEECCCEEEEECCCEECCCCCCCCC
GETLYISAPLARLLSKEEFASVVGHELGHFRGNDTIYSMRFAPVYAGLGMALGALAIDEN
CCEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEHHHHHHHHHHHHHHHEEECC
EGASGLAKVPAIAMLSYMYELFSTNVAKISRDREHKADEAGAEAGSALALATALIKVSLY
CCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHCCCCCHHHHHHHHHHHHHHH
SSLWNHARQENIERLNQGKIATNLSIVFQDTAKYDIEHENIEQIMKSTLEQSISHPTDNH
HHHHHHHHHHHHHHHHCCCEEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCCCC
PSVSLRLKALGVNTETITKDMLLIPEDAAIHLLDKSQKIEEEITLLEHKLMIAYGVASPP
CCEEEEEEEECCCHHHHHHCEEECCCCCCEEECCCHHHHHHHHHHHHHHHHHEECCCCCC
KEAERNHLLHATYSLAAAMISADGRVDLGEVAVAEGIGKKLFEDFDSIEFREYCNNPEQI
CHHHHCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHCCCHHCC
PDVVQLSEAMKEILEDEHKYLIIQYLKAISETDGSVSKDEELLLQKVASGLGISIT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA