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The map label for this gene is rhp9

Identifier: 148284481

GI number: 148284481

Start: 832139

End: 833761

Strand: Direct

Name: rhp9

Synonym: OTBS_0849

Alternate gene names: NA

Gene position: 832139-833761 (Clockwise)

Preceding gene: 148284480

Following gene: 148284482

Centisome position: 39.12

GC content: 31.24

Gene sequence:

>1623_bases
ATGGATGAGTTTAACCCTCAGGAGTTAGCTAATTCCATATGGGCATTAGGACGGTTAGAAATTCATCCATCAGATCAATT
TATTAATGCTTGGATACATCACGCTACTAAAACTATTGATAACTTTAATACTCAAAATTTAGCTAATTCCATATGGGCGT
TTGGACGGTTAGGAATTCATCCATCAGATCAATTCATTAATGCTTGGATACATCACGCTACTAAAACTATTGATAACTTT
AATACTCAAGGGTTAGCTAATTCCATATGGGCATTTGGACGGTTAGGAATTCATCCATCAGACCAATTCATTAAGGCTTG
GATACATCATGCTACTAAAACTATTGATAACTTTAATACTCAAGGGTTAGCTAATTCCATATGGGCATTAGGACGGTTAG
AAATTCATCCATCAGACCAATTTATTAAGGCTTGGATACATCATGCTACTAAAACTATTGATAACTTTAATACTCAAAAT
TTAGCTAATTCAGTATTGGCATTTGGACGGTTAGAAATTCATCCATCAGATCAATTCATTAAGGCTTGGATACATCATGC
TACTAAAACTATTGATAACTTTAATACTCAAAATTTAGCTAATTCAGTATTGGCATTTGGACGGTTAGAAATTCATCCAT
CAGATCAATTCATTAAGGCTTGGATACATCATGCTACTAAAACTATTGATAACTTTAATACTCAAGGGTTAGCTAATTCC
ATATGGGCATTAGGACAGTTAGAAATTCATCCATCAGATCAATTCATTAAGGCTTGGATACATCATGCTACTAAAACTAT
TGATAACTTTAGTCTTCAAGAGTTAGCTAATTCTATTTATGGAATATTCACATTAAATGTTTTATGTAACTCTAAAATTA
AAGTACCACAGCAATTTATTTCTGCTGTTAATCAAAATATTGAACTGTTTGATGAAAATAATGAGTGTATTAGTCAAATT
TTAAAAGCGCATTATTATTTTGGTAAACAAGGTGTAGGAATATTAACTTCACAAAATCGTCAACTTCTTGAAAAAAAGTT
TAAAACCAAATTAACACCTTGTCATACTTCAAATTTACAACTAAATGTTCTGAAGGTAGTCAAAAAAGTATTAGCACAAC
ACACTGTTAAAAGCGAGCATTATATTAAGCAGATTACTTCTAGTGTTGATATCTTTATTAAAGAGAAAAATATAGTAATT
CAAGTAGATGGCCCATCCCATTTTGATGACAATAATGCTCCCAATTTTTCAACTAGGCTTAATACTGAATTATTGAAAAG
TTATGGATACATAGTACATAGAATTCCATATTGGGTTTGGAATAAGTTAAAAACAAATATTGCCAAAGAAGAATATATAT
GTGAATTGATATGCACTGATGAATTTGTTTCTCAATCAGAGATGTTAGAGGAGGTGTTCTATGATGCACAAGAGAATATA
TCAGAGCAATCAACAAGCGAAATTTTACCTCATTCTGAATCACAAATATCAGATGATGATGTATTTTATGATGCGTACGA
ATATATTCCACAAGATCCATTAACACATGAATCTTTATCTCATTATGACATGCAAGCATTTGGTAACATAGATTTTCCTG
ATTTTGAGACACGTAGTTTGTAA

Upstream 100 bases:

>100_bases
GCTAGAGGCTTAGCAACAATTCTATATCAATTTGCAAAATTAAACTATGTTATAGGTTGGGAGTTTATTGAGGCTTGGAC
AAATAAAGCTATAAATCTTA

Downstream 100 bases:

>100_bases
TCCTTTTTACAAAAACTTAGCAAGCTTTTGATGCGAATGTATGCTAGAAAAATATGAGTTCTATATATAGGGGAAGGCAT
AACTATAGTTACATCACAAT

Product: putative RNA-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 540; Mature: 540

Protein sequence:

>540_residues
MDEFNPQELANSIWALGRLEIHPSDQFINAWIHHATKTIDNFNTQNLANSIWAFGRLGIHPSDQFINAWIHHATKTIDNF
NTQGLANSIWAFGRLGIHPSDQFIKAWIHHATKTIDNFNTQGLANSIWALGRLEIHPSDQFIKAWIHHATKTIDNFNTQN
LANSVLAFGRLEIHPSDQFIKAWIHHATKTIDNFNTQNLANSVLAFGRLEIHPSDQFIKAWIHHATKTIDNFNTQGLANS
IWALGQLEIHPSDQFIKAWIHHATKTIDNFSLQELANSIYGIFTLNVLCNSKIKVPQQFISAVNQNIELFDENNECISQI
LKAHYYFGKQGVGILTSQNRQLLEKKFKTKLTPCHTSNLQLNVLKVVKKVLAQHTVKSEHYIKQITSSVDIFIKEKNIVI
QVDGPSHFDDNNAPNFSTRLNTELLKSYGYIVHRIPYWVWNKLKTNIAKEEYICELICTDEFVSQSEMLEEVFYDAQENI
SEQSTSEILPHSESQISDDDVFYDAYEYIPQDPLTHESLSHYDMQAFGNIDFPDFETRSL

Sequences:

>Translated_540_residues
MDEFNPQELANSIWALGRLEIHPSDQFINAWIHHATKTIDNFNTQNLANSIWAFGRLGIHPSDQFINAWIHHATKTIDNF
NTQGLANSIWAFGRLGIHPSDQFIKAWIHHATKTIDNFNTQGLANSIWALGRLEIHPSDQFIKAWIHHATKTIDNFNTQN
LANSVLAFGRLEIHPSDQFIKAWIHHATKTIDNFNTQNLANSVLAFGRLEIHPSDQFIKAWIHHATKTIDNFNTQGLANS
IWALGQLEIHPSDQFIKAWIHHATKTIDNFSLQELANSIYGIFTLNVLCNSKIKVPQQFISAVNQNIELFDENNECISQI
LKAHYYFGKQGVGILTSQNRQLLEKKFKTKLTPCHTSNLQLNVLKVVKKVLAQHTVKSEHYIKQITSSVDIFIKEKNIVI
QVDGPSHFDDNNAPNFSTRLNTELLKSYGYIVHRIPYWVWNKLKTNIAKEEYICELICTDEFVSQSEMLEEVFYDAQENI
SEQSTSEILPHSESQISDDDVFYDAYEYIPQDPLTHESLSHYDMQAFGNIDFPDFETRSL
>Mature_540_residues
MDEFNPQELANSIWALGRLEIHPSDQFINAWIHHATKTIDNFNTQNLANSIWAFGRLGIHPSDQFINAWIHHATKTIDNF
NTQGLANSIWAFGRLGIHPSDQFIKAWIHHATKTIDNFNTQGLANSIWALGRLEIHPSDQFIKAWIHHATKTIDNFNTQN
LANSVLAFGRLEIHPSDQFIKAWIHHATKTIDNFNTQNLANSVLAFGRLEIHPSDQFIKAWIHHATKTIDNFNTQGLANS
IWALGQLEIHPSDQFIKAWIHHATKTIDNFSLQELANSIYGIFTLNVLCNSKIKVPQQFISAVNQNIELFDENNECISQI
LKAHYYFGKQGVGILTSQNRQLLEKKFKTKLTPCHTSNLQLNVLKVVKKVLAQHTVKSEHYIKQITSSVDIFIKEKNIVI
QVDGPSHFDDNNAPNFSTRLNTELLKSYGYIVHRIPYWVWNKLKTNIAKEEYICELICTDEFVSQSEMLEEVFYDAQENI
SEQSTSEILPHSESQISDDDVFYDAYEYIPQDPLTHESLSHYDMQAFGNIDFPDFETRSL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 62033; Mature: 62033

Theoretical pI: Translated: 6.34; Mature: 6.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDEFNPQELANSIWALGRLEIHPSDQFINAWIHHATKTIDNFNTQNLANSIWAFGRLGIH
CCCCCHHHHHHHHHHHCEEEECCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCC
PSDQFINAWIHHATKTIDNFNTQGLANSIWAFGRLGIHPSDQFIKAWIHHATKTIDNFNT
CCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCC
QGLANSIWALGRLEIHPSDQFIKAWIHHATKTIDNFNTQNLANSVLAFGRLEIHPSDQFI
CHHHHHHHHHEEEEECCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCEEEECCCHHHH
KAWIHHATKTIDNFNTQNLANSVLAFGRLEIHPSDQFIKAWIHHATKTIDNFNTQGLANS
HHHHHHHHHHHHCCCHHHHHHHHHHHCEEEECCCHHHHHHHHHHHHHHHHCCCCCHHHHH
IWALGQLEIHPSDQFIKAWIHHATKTIDNFSLQELANSIYGIFTLNVLCNSKIKVPQQFI
HHHCEEEEECCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHH
SAVNQNIELFDENNECISQILKAHYYFGKQGVGILTSQNRQLLEKKFKTKLTPCHTSNLQ
HHHCCCCEEEECCHHHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHCCCCCCCCCCC
LNVLKVVKKVLAQHTVKSEHYIKQITSSVDIFIKEKNIVIQVDGPSHFDDNNAPNFSTRL
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEEEEECCCCCCCCCCCCCCHHHH
NTELLKSYGYIVHRIPYWVWNKLKTNIAKEEYICELICTDEFVSQSEMLEEVFYDAQENI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SEQSTSEILPHSESQISDDDVFYDAYEYIPQDPLTHESLSHYDMQAFGNIDFPDFETRSL
HHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCC
>Mature Secondary Structure
MDEFNPQELANSIWALGRLEIHPSDQFINAWIHHATKTIDNFNTQNLANSIWAFGRLGIH
CCCCCHHHHHHHHHHHCEEEECCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCC
PSDQFINAWIHHATKTIDNFNTQGLANSIWAFGRLGIHPSDQFIKAWIHHATKTIDNFNT
CCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCC
QGLANSIWALGRLEIHPSDQFIKAWIHHATKTIDNFNTQNLANSVLAFGRLEIHPSDQFI
CHHHHHHHHHEEEEECCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCEEEECCCHHHH
KAWIHHATKTIDNFNTQNLANSVLAFGRLEIHPSDQFIKAWIHHATKTIDNFNTQGLANS
HHHHHHHHHHHHCCCHHHHHHHHHHHCEEEECCCHHHHHHHHHHHHHHHHCCCCCHHHHH
IWALGQLEIHPSDQFIKAWIHHATKTIDNFSLQELANSIYGIFTLNVLCNSKIKVPQQFI
HHHCEEEEECCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHH
SAVNQNIELFDENNECISQILKAHYYFGKQGVGILTSQNRQLLEKKFKTKLTPCHTSNLQ
HHHCCCCEEEECCHHHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHCCCCCCCCCCC
LNVLKVVKKVLAQHTVKSEHYIKQITSSVDIFIKEKNIVIQVDGPSHFDDNNAPNFSTRL
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEEEEECCCCCCCCCCCCCCHHHH
NTELLKSYGYIVHRIPYWVWNKLKTNIAKEEYICELICTDEFVSQSEMLEEVFYDAQENI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SEQSTSEILPHSESQISDDDVFYDAYEYIPQDPLTHESLSHYDMQAFGNIDFPDFETRSL
HHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA