Definition | Orientia tsutsugamushi Boryong, complete genome. |
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Accession | NC_009488 |
Length | 2,127,051 |
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The map label for this gene is proP [H]
Identifier: 148284480
GI number: 148284480
Start: 826664
End: 827884
Strand: Direct
Name: proP [H]
Synonym: OTBS_0844
Alternate gene names: 148284480
Gene position: 826664-827884 (Clockwise)
Preceding gene: 148284479
Following gene: 148284481
Centisome position: 38.86
GC content: 29.65
Gene sequence:
>1221_bases ATGAGTAACAAAGATCTGATAGTTGCATATTTTGCTAGTATCGTCCAAGTATGTAATTATGCATTATTTGGGCATGCAAT TACTTTTTTAGCTGCTGAATATATGCCACCTGATGTTTCAACTAATCCTACTACCAGTATCTTTATTTTGCTAGGAGCCA CTTCTATTGCTAAACCAATAGGAGCGGTAATATATGGGATTATAGGTGATTATTATAGCCGAAGATTAGCAATTAGAACA GCTTCATTACTATCAACACTAGCTGTAATCTCTATTGGGTTTATACCTGCATACCAAAGAATAGGGATGTTATCGAGCAT TTTATTTATTCTATGCCGTAGTATTTTTATTATGGGGTTAATAGGTGAGACTGATGGAGTGCGAATATATGTATTTGAAG CAGTAGATAAGTACAAAAACTTAGCGAACGGAATAATAGCTGGTTGTTGGCAAATAGGAGCACAATTAGCTGTATTGCTT TTATTAGTAGCAAATATTAATAATTTTCAATATAGTTGGCGCTTCTGTTTTATTACTGGAGGAGTATTAGGATTGTTGGT GTTTTTTCAGAGTAAACATTTAAAGATTAATAATATCAAAACTTCAAAAACTACAACAGCAAGCAAATTATTTCAGTCCT GTAAACTTATACCAGGATATTGGAGGTTACTAATACCCTGTATAATTATACAGGGATGTATTGGTGCTATTTATAGTTTT CAACTATATTTTTTCCCTGTATATGTTATTAAAATGCTAAACATTGTTGACTTCAATAATATGAATTTTACTATTGTATT AGCATTATTATTATATTCTATAATGGCTGTATGGTCAGGATATTTAGCAGATAAATATTACTTGCATTATCAAACCATCT TTTCTGCTTTAATGTTAAGTATAGTTTTCAGTACAGTTAATATGGCTATGATGATAAATTATCAAGAATTCTTACCAGTA TTATATATTATACCAATTCTATTAATACCTTTTTATTCTGTTCCGCTACAGGTAAAAGTATGTAAATTATTTTCTGATAA TATTAGACTAAGATTGTTTAGCTTATCACATTCTATTGGATCAGTATTAATATCAGCACAAATATGTGCTATATCAGCAT TAGCATATAATAAGGCTAATTTTTTGCCAATGCTGATTTTAATCTTATTATTTCTTATCTTAGGGCTTACAGTATTAGTA ATAAAACCTAGAATACAGTAA
Upstream 100 bases:
>100_bases GGTAGTTTTAATATTTATTAATTTGTAGGTAAAAGTCCTGATAAACTACAACATAATCTATAGTATTATTTTATTTTTAT AAGAAGCTTTAGAAAATTTT
Downstream 100 bases:
>100_bases ATTATGTCTTGTTAATACTGTTTTGACACATTATTGTTTTTAATGTTAACTTATATAGCTAAACTACTATAAAACAATTT TAATAATAAGATGTTAAGAT
Product: proline/betaine transporter
Products: betaine [Cytoplasm]; Proton [Cytoplasm]; L-proline [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 406; Mature: 405
Protein sequence:
>406_residues MSNKDLIVAYFASIVQVCNYALFGHAITFLAAEYMPPDVSTNPTTSIFILLGATSIAKPIGAVIYGIIGDYYSRRLAIRT ASLLSTLAVISIGFIPAYQRIGMLSSILFILCRSIFIMGLIGETDGVRIYVFEAVDKYKNLANGIIAGCWQIGAQLAVLL LLVANINNFQYSWRFCFITGGVLGLLVFFQSKHLKINNIKTSKTTTASKLFQSCKLIPGYWRLLIPCIIIQGCIGAIYSF QLYFFPVYVIKMLNIVDFNNMNFTIVLALLLYSIMAVWSGYLADKYYLHYQTIFSALMLSIVFSTVNMAMMINYQEFLPV LYIIPILLIPFYSVPLQVKVCKLFSDNIRLRLFSLSHSIGSVLISAQICAISALAYNKANFLPMLILILLFLILGLTVLV IKPRIQ
Sequences:
>Translated_406_residues MSNKDLIVAYFASIVQVCNYALFGHAITFLAAEYMPPDVSTNPTTSIFILLGATSIAKPIGAVIYGIIGDYYSRRLAIRT ASLLSTLAVISIGFIPAYQRIGMLSSILFILCRSIFIMGLIGETDGVRIYVFEAVDKYKNLANGIIAGCWQIGAQLAVLL LLVANINNFQYSWRFCFITGGVLGLLVFFQSKHLKINNIKTSKTTTASKLFQSCKLIPGYWRLLIPCIIIQGCIGAIYSF QLYFFPVYVIKMLNIVDFNNMNFTIVLALLLYSIMAVWSGYLADKYYLHYQTIFSALMLSIVFSTVNMAMMINYQEFLPV LYIIPILLIPFYSVPLQVKVCKLFSDNIRLRLFSLSHSIGSVLISAQICAISALAYNKANFLPMLILILLFLILGLTVLV IKPRIQ >Mature_405_residues SNKDLIVAYFASIVQVCNYALFGHAITFLAAEYMPPDVSTNPTTSIFILLGATSIAKPIGAVIYGIIGDYYSRRLAIRTA SLLSTLAVISIGFIPAYQRIGMLSSILFILCRSIFIMGLIGETDGVRIYVFEAVDKYKNLANGIIAGCWQIGAQLAVLLL LVANINNFQYSWRFCFITGGVLGLLVFFQSKHLKINNIKTSKTTTASKLFQSCKLIPGYWRLLIPCIIIQGCIGAIYSFQ LYFFPVYVIKMLNIVDFNNMNFTIVLALLLYSIMAVWSGYLADKYYLHYQTIFSALMLSIVFSTVNMAMMINYQEFLPVL YIIPILLIPFYSVPLQVKVCKLFSDNIRLRLFSLSHSIGSVLISAQICAISALAYNKANFLPMLILILLFLILGLTVLVI KPRIQ
Specific function: May be a proton symporter invoved in the uptake of osmolytes such as proline and glycine betaine [H]
COG id: COG0477
COG function: function code GEPR; Permeases of the major facilitator superfamily
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family [H]
Homologues:
Organism=Escherichia coli, GI1790550, Length=306, Percent_Identity=23.5294117647059, Blast_Score=70, Evalue=3e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020846 - InterPro: IPR011701 - InterPro: IPR016196 - InterPro: IPR005829 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 45409; Mature: 45278
Theoretical pI: Translated: 9.54; Mature: 9.54
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNKDLIVAYFASIVQVCNYALFGHAITFLAAEYMPPDVSTNPTTSIFILLGATSIAKPI CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCHHHHHHH GAVIYGIIGDYYSRRLAIRTASLLSTLAVISIGFIPAYQRIGMLSSILFILCRSIFIMGL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IGETDGVRIYVFEAVDKYKNLANGIIAGCWQIGAQLAVLLLLVANINNFQYSWRFCFITG CCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEHH GVLGLLVFFQSKHLKINNIKTSKTTTASKLFQSCKLIPGYWRLLIPCIIIQGCIGAIYSF HHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH QLYFFPVYVIKMLNIVDFNNMNFTIVLALLLYSIMAVWSGYLADKYYLHYQTIFSALMLS HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IVFSTVNMAMMINYQEFLPVLYIIPILLIPFYSVPLQVKVCKLFSDNIRLRLFSLSHSIG HHHHHHHHHHEECHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCEEEEEEHHHHHH SVLISAQICAISALAYNKANFLPMLILILLFLILGLTVLVIKPRIQ HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure SNKDLIVAYFASIVQVCNYALFGHAITFLAAEYMPPDVSTNPTTSIFILLGATSIAKPI CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCHHHHHHH GAVIYGIIGDYYSRRLAIRTASLLSTLAVISIGFIPAYQRIGMLSSILFILCRSIFIMGL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IGETDGVRIYVFEAVDKYKNLANGIIAGCWQIGAQLAVLLLLVANINNFQYSWRFCFITG CCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEHH GVLGLLVFFQSKHLKINNIKTSKTTTASKLFQSCKLIPGYWRLLIPCIIIQGCIGAIYSF HHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH QLYFFPVYVIKMLNIVDFNNMNFTIVLALLLYSIMAVWSGYLADKYYLHYQTIFSALMLS HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IVFSTVNMAMMINYQEFLPVLYIIPILLIPFYSVPLQVKVCKLFSDNIRLRLFSLSHSIG HHHHHHHHHHEECHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCEEEEEEHHHHHH SVLISAQICAISALAYNKANFLPMLILILLFLILGLTVLVIKPRIQ HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: betaine [Periplasm]; Proton [Periplasm]; L-proline [Periplasm] [C]
Specific reaction: Proton [Periplasm] + betaine [Periplasm] = Proton [Cytoplasm] + betaine [Cytoplasm] Proton [Periplasm] + L-proline [Periplasm] = Proton [Cytoplasm] + L-proline [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 10708580 [H]