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The map label for this gene is sirB [H]

Identifier: 148268837

GI number: 148268837

Start: 2561670

End: 2562401

Strand: Reverse

Name: sirB [H]

Synonym: SaurJH9_2425

Alternate gene names: 148268837

Gene position: 2562401-2561670 (Counterclockwise)

Preceding gene: 148268838

Following gene: 148268836

Centisome position: 88.15

GC content: 35.52

Gene sequence:

>732_bases
GTGAATGGGAATATCATTGTTGCACATGGCATGAGGCACGGACGACAGAATCAAGCGTTAGAAGCATTTATTTCTGAATT
AGTAAAAGATGATATACATCACTATGATATTGCGTTTTTAGAAAGTGAGCATCAGGATTTAGAGACGGTAATGACGACGT
TGATTCAAAGTGGGGTTGACCATTTTAAAATTGTACCATTGCTAATCTTTAGTGCAATGCATTATCTCAAGGATATACCG
AATATCGTTCATGAAATGAAACGACGGTATCCAGACATAAAGGTAGAAGTAAGCGAGCCACTTGGCACACATCCTTTAAT
GAGACGATTAATTGAACAACGTATTTGTGACGCATTAGCAGGTGACGAACAACAAGTTGGAGTTATGGTTGTTGCACACG
GCAATATTAATGGAAATTTTACTAAGGCACACGAAGAGTTACAAATATGCGCTCAACATTTGCAGATTAATAAACCTACT
TATGCGAGAACGCTATATGGAGAGATTAGTTTTACACATGATTTAGAAAGCATCTCGAAACGGTATCAAAAATTGATTGT
CGTACCATTATTTTTATATGACGGAAGACTTGTTAACAAAGTGAAGCAGCAAATGAATGACATGGTTATTAATACAGATA
TACACTTCACACCTTCAATTAACTTCGACCCAATTTTAAAGCAAATCATTAACGATAGATTAGAAAGCTTAATGATTCCG
ATGAAAATATAA

Upstream 100 bases:

>100_bases
TACAGGCATCAGGGAATTCCCTGATTTTACATTATAATGTGATTCTTTTCACAAAAACAAAATGATTTGGTATACAATAC
GTGTGAAAGGGTTGGTAAAT

Downstream 100 bases:

>100_bases
AAGCACTAACGAAAAATTAATACCTTTTTTTGAAATAAATATTATGGAGTAAAGGGGCATATTTTATGGCAAAGCAAAAA
CTAGTAATGATTGGTAACGG

Product: cobalamin (vitamin B12) biosynthesis CbiX protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 243; Mature: 243

Protein sequence:

>243_residues
MNGNIIVAHGMRHGRQNQALEAFISELVKDDIHHYDIAFLESEHQDLETVMTTLIQSGVDHFKIVPLLIFSAMHYLKDIP
NIVHEMKRRYPDIKVEVSEPLGTHPLMRRLIEQRICDALAGDEQQVGVMVVAHGNINGNFTKAHEELQICAQHLQINKPT
YARTLYGEISFTHDLESISKRYQKLIVVPLFLYDGRLVNKVKQQMNDMVINTDIHFTPSINFDPILKQIINDRLESLMIP
MKI

Sequences:

>Translated_243_residues
MNGNIIVAHGMRHGRQNQALEAFISELVKDDIHHYDIAFLESEHQDLETVMTTLIQSGVDHFKIVPLLIFSAMHYLKDIP
NIVHEMKRRYPDIKVEVSEPLGTHPLMRRLIEQRICDALAGDEQQVGVMVVAHGNINGNFTKAHEELQICAQHLQINKPT
YARTLYGEISFTHDLESISKRYQKLIVVPLFLYDGRLVNKVKQQMNDMVINTDIHFTPSINFDPILKQIINDRLESLMIP
MKI
>Mature_243_residues
MNGNIIVAHGMRHGRQNQALEAFISELVKDDIHHYDIAFLESEHQDLETVMTTLIQSGVDHFKIVPLLIFSAMHYLKDIP
NIVHEMKRRYPDIKVEVSEPLGTHPLMRRLIEQRICDALAGDEQQVGVMVVAHGNINGNFTKAHEELQICAQHLQINKPT
YARTLYGEISFTHDLESISKRYQKLIVVPLFLYDGRLVNKVKQQMNDMVINTDIHFTPSINFDPILKQIINDRLESLMIP
MKI

Specific function: Chelates iron to the siroheme precursor [H]

COG id: COG2138

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CbiX family. SirB subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002762 [H]

Pfam domain/function: PF01903 CbiX [H]

EC number: =4.99.1.4 [H]

Molecular weight: Translated: 27985; Mature: 27985

Theoretical pI: Translated: 6.63; Mature: 6.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNGNIIVAHGMRHGRQNQALEAFISELVKDDIHHYDIAFLESEHQDLETVMTTLIQSGVD
CCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCH
HFKIVPLLIFSAMHYLKDIPNIVHEMKRRYPDIKVEVSEPLGTHPLMRRLIEQRICDALA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHHHHHC
GDEQQVGVMVVAHGNINGNFTKAHEELQICAQHLQINKPTYARTLYGEISFTHDLESISK
CCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCHHHHHHHHHHH
RYQKLIVVPLFLYDGRLVNKVKQQMNDMVINTDIHFTPSINFDPILKQIINDRLESLMIP
HHHHHHHHHHHHHCCHHHHHHHHHHHCEEEECCEEECCCCCHHHHHHHHHHHHHHHHCCC
MKI
CCC
>Mature Secondary Structure
MNGNIIVAHGMRHGRQNQALEAFISELVKDDIHHYDIAFLESEHQDLETVMTTLIQSGVD
CCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCH
HFKIVPLLIFSAMHYLKDIPNIVHEMKRRYPDIKVEVSEPLGTHPLMRRLIEQRICDALA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHHHHHC
GDEQQVGVMVVAHGNINGNFTKAHEELQICAQHLQINKPTYARTLYGEISFTHDLESISK
CCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCHHHHHHHHHHH
RYQKLIVVPLFLYDGRLVNKVKQQMNDMVINTDIHFTPSINFDPILKQIINDRLESLMIP
HHHHHHHHHHHHHCCHHHHHHHHHHHCEEEECCEEECCCCCHHHHHHHHHHHHHHHHCCC
MKI
CCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA