| Definition | Staphylococcus aureus subsp. aureus JH9, complete genome. |
|---|---|
| Accession | NC_009487 |
| Length | 2,906,700 |
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The map label for this gene is ylmA [H]
Identifier: 148268600
GI number: 148268600
Start: 2308804
End: 2309586
Strand: Reverse
Name: ylmA [H]
Synonym: SaurJH9_2186
Alternate gene names: 148268600
Gene position: 2309586-2308804 (Counterclockwise)
Preceding gene: 148268601
Following gene: 148268599
Centisome position: 79.46
GC content: 34.23
Gene sequence:
>783_bases ATGTTAATTCAATTAGATCAAATTGGGCGAATGAAGCAAGGAAAAACAATTTTAAAAAATATTTCTTGGCAAATTGCTAA AGGTGATAAATGGATATTATATGGGTTGAATGGTGCTGGTAAGACAACGCTATTAAATATATTAAATGCATATGAGCCTG CGACAACTGGCGGTGTTAATCTATTTGGTAAAATGCCAGGCAAGGTAGGGTATTCTGCAGAGACTGTACGACAACATATA GGTTTTGTATCTCATAGTTTACTGGAAAAGTTTCAAGAGGGTGAAAGAGTAATCGATGTGGTGATAAGCGGTGCTTTTAA ATCAATTGGTGTTTATCAAGATATTGATGATGAGGTACGTAATGAAGCACATCATTTACTTAAATTAGTTGGAATATCTG CTAAAGCGCAACAATATATTGGTTATTTATCTACAGGTGAAAAACAACGAGTGATGATTGCACGAGCTTTAATGGGGCAA CCTCAGGTTTTAATTTTAGATGAGCCAGCAGCTGGTTTAGACTTTATTGCTCGTGAGTCACTATTGAATATACTTGACTC ATTGTCAGATTCATATCCAACGCTTGCGATGATTTATGTGACGCACTTTATTGAAGAAATTACTGGTAACTTTACTAAAA TTTTGCTATTAAAAGATGGGGAAAGTGTACAACAAGGATTAATAGATGATATTTTGACATCTGAAAACATGTCACGATTT TTCCAGAAAAATGTAGCAGTTCAAAGATGGAATAATCGATTTTCTATGGCAATGTTAGAGTAA
Upstream 100 bases:
>100_bases AAGGAAGTGTTTTATTTATTTAAATAGTCTGACAATTAAGGGTGTTATGTTAATATGATTTTATGAGAAGTATGGAGTAG CAATAAAGGGGTGACCTCGC
Downstream 100 bases:
>100_bases ATATTTTGCAAATAATAAGTAATAATGACAAAATTTAATTAAGATAAAATGGACAGTGGAGGGCAATATGGATAACGTAA AAGCAATATTTTTGGACATG
Product: ABC transporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 260; Mature: 260
Protein sequence:
>260_residues MLIQLDQIGRMKQGKTILKNISWQIAKGDKWILYGLNGAGKTTLLNILNAYEPATTGGVNLFGKMPGKVGYSAETVRQHI GFVSHSLLEKFQEGERVIDVVISGAFKSIGVYQDIDDEVRNEAHHLLKLVGISAKAQQYIGYLSTGEKQRVMIARALMGQ PQVLILDEPAAGLDFIARESLLNILDSLSDSYPTLAMIYVTHFIEEITGNFTKILLLKDGESVQQGLIDDILTSENMSRF FQKNVAVQRWNNRFSMAMLE
Sequences:
>Translated_260_residues MLIQLDQIGRMKQGKTILKNISWQIAKGDKWILYGLNGAGKTTLLNILNAYEPATTGGVNLFGKMPGKVGYSAETVRQHI GFVSHSLLEKFQEGERVIDVVISGAFKSIGVYQDIDDEVRNEAHHLLKLVGISAKAQQYIGYLSTGEKQRVMIARALMGQ PQVLILDEPAAGLDFIARESLLNILDSLSDSYPTLAMIYVTHFIEEITGNFTKILLLKDGESVQQGLIDDILTSENMSRF FQKNVAVQRWNNRFSMAMLE >Mature_260_residues MLIQLDQIGRMKQGKTILKNISWQIAKGDKWILYGLNGAGKTTLLNILNAYEPATTGGVNLFGKMPGKVGYSAETVRQHI GFVSHSLLEKFQEGERVIDVVISGAFKSIGVYQDIDDEVRNEAHHLLKLVGISAKAQQYIGYLSTGEKQRVMIARALMGQ PQVLILDEPAAGLDFIARESLLNILDSLSDSYPTLAMIYVTHFIEEITGNFTKILLLKDGESVQQGLIDDILTSENMSRF FQKNVAVQRWNNRFSMAMLE
Specific function: Involved In The Transport Of Molybdenum Into The Cell. Involved In Photorepair. Could Act On Uv-Induced DNA Damage Other Than Pyrimidine Dimers. [C]
COG id: COG1119
COG function: function code P; ABC-type molybdenum transport system, ATPase component/photorepair protein PhrA
Gene ontology:
Cell location: Inner Membrane-Associated [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transporter domain [H]
Homologues:
Organism=Homo sapiens, GI30795238, Length=219, Percent_Identity=27.3972602739726, Blast_Score=75, Evalue=5e-14, Organism=Homo sapiens, GI27881501, Length=219, Percent_Identity=27.3972602739726, Blast_Score=75, Evalue=5e-14, Organism=Homo sapiens, GI27477115, Length=190, Percent_Identity=30, Blast_Score=73, Evalue=2e-13, Organism=Homo sapiens, GI31657092, Length=208, Percent_Identity=25.9615384615385, Blast_Score=72, Evalue=4e-13, Organism=Homo sapiens, GI105990541, Length=253, Percent_Identity=26.4822134387352, Blast_Score=70, Evalue=2e-12, Organism=Homo sapiens, GI153792144, Length=179, Percent_Identity=30.7262569832402, Blast_Score=70, Evalue=2e-12, Organism=Homo sapiens, GI116734710, Length=204, Percent_Identity=28.4313725490196, Blast_Score=70, Evalue=3e-12, Organism=Homo sapiens, GI27262624, Length=197, Percent_Identity=30.4568527918782, Blast_Score=68, Evalue=1e-11, Organism=Homo sapiens, GI27262626, Length=197, Percent_Identity=30.4568527918782, Blast_Score=68, Evalue=1e-11, Organism=Homo sapiens, GI215820660, Length=223, Percent_Identity=22.8699551569507, Blast_Score=66, Evalue=3e-11, Organism=Homo sapiens, GI20143975, Length=223, Percent_Identity=22.8699551569507, Blast_Score=66, Evalue=3e-11, Organism=Homo sapiens, GI45446740, Length=210, Percent_Identity=24.7619047619048, Blast_Score=66, Evalue=4e-11, Organism=Homo sapiens, GI47078218, Length=210, Percent_Identity=24.7619047619048, Blast_Score=66, Evalue=4e-11, Organism=Homo sapiens, GI4505771, Length=232, Percent_Identity=28.0172413793103, Blast_Score=65, Evalue=4e-11, Organism=Homo sapiens, GI150417984, Length=191, Percent_Identity=29.3193717277487, Blast_Score=65, Evalue=5e-11, Organism=Homo sapiens, GI9961252, Length=232, Percent_Identity=28.0172413793103, Blast_Score=65, Evalue=5e-11, Organism=Escherichia coli, GI1786975, Length=209, Percent_Identity=34.4497607655502, Blast_Score=122, Evalue=3e-29, Organism=Escherichia coli, GI1786319, Length=215, Percent_Identity=33.4883720930233, Blast_Score=97, Evalue=1e-21, Organism=Escherichia coli, GI87081834, Length=228, Percent_Identity=31.140350877193, Blast_Score=97, Evalue=1e-21, Organism=Escherichia coli, GI1787089, Length=237, Percent_Identity=29.1139240506329, Blast_Score=95, Evalue=4e-21, Organism=Escherichia coli, GI1786563, Length=207, Percent_Identity=31.8840579710145, Blast_Score=93, Evalue=2e-20, Organism=Escherichia coli, GI1787105, Length=211, Percent_Identity=31.7535545023697, Blast_Score=91, Evalue=7e-20, Organism=Escherichia coli, GI1786398, Length=241, Percent_Identity=29.4605809128631, Blast_Score=91, Evalue=9e-20, Organism=Escherichia coli, GI1787029, Length=230, Percent_Identity=27.8260869565217, Blast_Score=90, Evalue=2e-19, Organism=Escherichia coli, GI1788225, Length=244, Percent_Identity=29.0983606557377, Blast_Score=89, Evalue=3e-19, Organism=Escherichia coli, GI1789672, Length=238, Percent_Identity=26.4705882352941, Blast_Score=88, Evalue=4e-19, Organism=Escherichia coli, GI1788761, Length=235, Percent_Identity=30.6382978723404, Blast_Score=87, Evalue=1e-18, Organism=Escherichia coli, GI1789873, Length=212, Percent_Identity=29.2452830188679, Blast_Score=82, Evalue=3e-17, Organism=Escherichia coli, GI1786345, Length=231, Percent_Identity=28.1385281385281, Blast_Score=82, Evalue=4e-17, Organism=Escherichia coli, GI1786703, Length=219, Percent_Identity=29.6803652968037, Blast_Score=82, Evalue=4e-17, Organism=Escherichia coli, GI1787370, Length=234, Percent_Identity=26.4957264957265, Blast_Score=82, Evalue=5e-17, Organism=Escherichia coli, GI87081709, Length=242, Percent_Identity=26.4462809917355, Blast_Score=80, Evalue=2e-16, Organism=Escherichia coli, GI1789032, Length=219, Percent_Identity=29.2237442922374, Blast_Score=79, Evalue=3e-16, Organism=Escherichia coli, GI87081791, Length=233, Percent_Identity=27.8969957081545, Blast_Score=77, Evalue=1e-15, Organism=Escherichia coli, GI1787712, Length=204, Percent_Identity=28.921568627451, Blast_Score=77, Evalue=1e-15, Organism=Escherichia coli, GI1789891, Length=250, Percent_Identity=24.4, Blast_Score=77, Evalue=1e-15, Organism=Escherichia coli, GI1788506, Length=240, Percent_Identity=26.6666666666667, Blast_Score=76, Evalue=2e-15, Organism=Escherichia coli, GI1787547, Length=228, Percent_Identity=29.3859649122807, Blast_Score=75, Evalue=6e-15, Organism=Escherichia coli, GI1788897, Length=217, Percent_Identity=28.5714285714286, Blast_Score=74, Evalue=7e-15, Organism=Escherichia coli, GI1786872, Length=208, Percent_Identity=25.9615384615385, Blast_Score=74, Evalue=1e-14, Organism=Escherichia coli, GI1789864, Length=237, Percent_Identity=24.8945147679325, Blast_Score=73, Evalue=2e-14, Organism=Escherichia coli, GI1789593, Length=238, Percent_Identity=26.0504201680672, Blast_Score=72, Evalue=3e-14, Organism=Escherichia coli, GI1786654, Length=235, Percent_Identity=27.2340425531915, Blast_Score=72, Evalue=3e-14, Organism=Escherichia coli, GI1790525, Length=242, Percent_Identity=26.0330578512397, Blast_Score=72, Evalue=3e-14, Organism=Escherichia coli, GI1786803, Length=228, Percent_Identity=27.1929824561404, Blast_Score=72, Evalue=3e-14, Organism=Escherichia coli, GI1786253, Length=222, Percent_Identity=24.3243243243243, Blast_Score=72, Evalue=4e-14, Organism=Escherichia coli, GI1790544, Length=234, Percent_Identity=26.9230769230769, Blast_Score=72, Evalue=5e-14, Organism=Escherichia coli, GI48995001, Length=228, Percent_Identity=25.8771929824561, Blast_Score=71, Evalue=7e-14, Organism=Escherichia coli, GI1788644, Length=251, Percent_Identity=28.2868525896414, Blast_Score=71, Evalue=7e-14, Organism=Escherichia coli, GI1790190, Length=223, Percent_Identity=27.8026905829596, Blast_Score=71, Evalue=9e-14, Organism=Escherichia coli, GI1788450, Length=242, Percent_Identity=24.7933884297521, Blast_Score=70, Evalue=1e-13, Organism=Escherichia coli, GI145693107, Length=236, Percent_Identity=27.9661016949153, Blast_Score=68, Evalue=7e-13, Organism=Escherichia coli, GI1787772, Length=196, Percent_Identity=26.530612244898, Blast_Score=67, Evalue=9e-13, Organism=Escherichia coli, GI1787164, Length=209, Percent_Identity=29.1866028708134, Blast_Score=67, Evalue=9e-13, Organism=Escherichia coli, GI1789991, Length=207, Percent_Identity=27.0531400966184, Blast_Score=67, Evalue=1e-12, Organism=Escherichia coli, GI1786981, Length=213, Percent_Identity=28.6384976525822, Blast_Score=67, Evalue=1e-12, Organism=Escherichia coli, GI1789962, Length=219, Percent_Identity=24.6575342465753, Blast_Score=67, Evalue=2e-12, Organism=Escherichia coli, GI1788210, Length=223, Percent_Identity=29.1479820627803, Blast_Score=65, Evalue=3e-12, Organism=Escherichia coli, GI87082268, Length=182, Percent_Identity=28.5714285714286, Blast_Score=65, Evalue=4e-12, Organism=Escherichia coli, GI1790467, Length=226, Percent_Identity=27.4336283185841, Blast_Score=65, Evalue=4e-12, Organism=Escherichia coli, GI87081782, Length=216, Percent_Identity=25.9259259259259, Blast_Score=65, Evalue=5e-12, Organism=Escherichia coli, GI48994943, Length=229, Percent_Identity=24.0174672489083, Blast_Score=64, Evalue=1e-11, Organism=Escherichia coli, GI1788472, Length=220, Percent_Identity=25, Blast_Score=64, Evalue=1e-11, Organism=Escherichia coli, GI1787182, Length=223, Percent_Identity=25.1121076233184, Blast_Score=62, Evalue=3e-11, Organism=Escherichia coli, GI1787113, Length=230, Percent_Identity=26.5217391304348, Blast_Score=62, Evalue=5e-11, Organism=Escherichia coli, GI48994883, Length=139, Percent_Identity=28.0575539568345, Blast_Score=61, Evalue=6e-11, Organism=Caenorhabditis elegans, GI17569143, Length=227, Percent_Identity=29.0748898678414, Blast_Score=79, Evalue=3e-15, Organism=Caenorhabditis elegans, GI17569145, Length=224, Percent_Identity=29.9107142857143, Blast_Score=75, Evalue=5e-14, Organism=Caenorhabditis elegans, GI193202349, Length=236, Percent_Identity=28.3898305084746, Blast_Score=74, Evalue=8e-14, Organism=Caenorhabditis elegans, GI193209708, Length=228, Percent_Identity=26.7543859649123, Blast_Score=72, Evalue=3e-13, Organism=Caenorhabditis elegans, GI212646699, Length=242, Percent_Identity=28.099173553719, Blast_Score=68, Evalue=5e-12, Organism=Caenorhabditis elegans, GI25146777, Length=220, Percent_Identity=25.9090909090909, Blast_Score=64, Evalue=7e-11, Organism=Caenorhabditis elegans, GI86563255, Length=243, Percent_Identity=26.3374485596708, Blast_Score=64, Evalue=8e-11, Organism=Saccharomyces cerevisiae, GI6320266, Length=231, Percent_Identity=25.5411255411255, Blast_Score=77, Evalue=3e-15, Organism=Saccharomyces cerevisiae, GI6324985, Length=221, Percent_Identity=29.4117647058824, Blast_Score=74, Evalue=2e-14, Organism=Saccharomyces cerevisiae, GI6321081, Length=246, Percent_Identity=25.609756097561, Blast_Score=64, Evalue=2e-11, Organism=Drosophila melanogaster, GI24582014, Length=198, Percent_Identity=30.8080808080808, Blast_Score=82, Evalue=3e-16, Organism=Drosophila melanogaster, GI24582012, Length=198, Percent_Identity=30.8080808080808, Blast_Score=82, Evalue=3e-16, Organism=Drosophila melanogaster, GI28574150, Length=213, Percent_Identity=28.169014084507, Blast_Score=76, Evalue=2e-14, Organism=Drosophila melanogaster, GI116007328, Length=213, Percent_Identity=28.169014084507, Blast_Score=76, Evalue=2e-14, Organism=Drosophila melanogaster, GI24650853, Length=199, Percent_Identity=29.1457286432161, Blast_Score=74, Evalue=1e-13, Organism=Drosophila melanogaster, GI281363262, Length=229, Percent_Identity=28.82096069869, Blast_Score=74, Evalue=1e-13, Organism=Drosophila melanogaster, GI24653245, Length=229, Percent_Identity=28.82096069869, Blast_Score=74, Evalue=1e-13, Organism=Drosophila melanogaster, GI24650855, Length=199, Percent_Identity=29.1457286432161, Blast_Score=73, Evalue=2e-13, Organism=Drosophila melanogaster, GI221500365, Length=243, Percent_Identity=26.3374485596708, Blast_Score=73, Evalue=2e-13, Organism=Drosophila melanogaster, GI116007184, Length=243, Percent_Identity=26.3374485596708, Blast_Score=73, Evalue=2e-13, Organism=Drosophila melanogaster, GI85725262, Length=208, Percent_Identity=29.8076923076923, Blast_Score=72, Evalue=3e-13, Organism=Drosophila melanogaster, GI281362751, Length=214, Percent_Identity=28.9719626168224, Blast_Score=71, Evalue=7e-13, Organism=Drosophila melanogaster, GI19920532, Length=223, Percent_Identity=28.2511210762332, Blast_Score=70, Evalue=1e-12, Organism=Drosophila melanogaster, GI24580930, Length=223, Percent_Identity=28.2511210762332, Blast_Score=70, Evalue=1e-12, Organism=Drosophila melanogaster, GI24643674, Length=226, Percent_Identity=26.5486725663717, Blast_Score=70, Evalue=2e-12, Organism=Drosophila melanogaster, GI24659289, Length=250, Percent_Identity=25.6, Blast_Score=68, Evalue=8e-12, Organism=Drosophila melanogaster, GI28574744, Length=178, Percent_Identity=29.7752808988764, Blast_Score=67, Evalue=8e-12, Organism=Drosophila melanogaster, GI24666092, Length=217, Percent_Identity=27.1889400921659, Blast_Score=67, Evalue=2e-11, Organism=Drosophila melanogaster, GI23397593, Length=241, Percent_Identity=30.2904564315353, Blast_Score=64, Evalue=7e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003439 - InterPro: IPR017871 - InterPro: IPR003593 [H]
Pfam domain/function: PF00005 ABC_tran [H]
EC number: NA
Molecular weight: Translated: 28995; Mature: 28995
Theoretical pI: Translated: 6.69; Mature: 6.69
Prosite motif: PS50893 ABC_TRANSPORTER_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLIQLDQIGRMKQGKTILKNISWQIAKGDKWILYGLNGAGKTTLLNILNAYEPATTGGVN CEEECHHHCCHHCCHHHHHCCCEEEECCCEEEEEEECCCCHHHHHHHHHHCCCCCCCCCE LFGKMPGKVGYSAETVRQHIGFVSHSLLEKFQEGERVIDVVISGAFKSIGVYQDIDDEVR EEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHH NEAHHLLKLVGISAKAQQYIGYLSTGEKQRVMIARALMGQPQVLILDEPAAGLDFIARES HHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHH LLNILDSLSDSYPTLAMIYVTHFIEEITGNFTKILLLKDGESVQQGLIDDILTSENMSRF HHHHHHHHCCCCCHHHHHHHHHHHHHHCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHH FQKNVAVQRWNNRFSMAMLE HHHHHHHHHHCCCEEEEECC >Mature Secondary Structure MLIQLDQIGRMKQGKTILKNISWQIAKGDKWILYGLNGAGKTTLLNILNAYEPATTGGVN CEEECHHHCCHHCCHHHHHCCCEEEECCCEEEEEEECCCCHHHHHHHHHHCCCCCCCCCE LFGKMPGKVGYSAETVRQHIGFVSHSLLEKFQEGERVIDVVISGAFKSIGVYQDIDDEVR EEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHH NEAHHLLKLVGISAKAQQYIGYLSTGEKQRVMIARALMGQPQVLILDEPAAGLDFIARES HHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHH LLNILDSLSDSYPTLAMIYVTHFIEEITGNFTKILLLKDGESVQQGLIDDILTSENMSRF HHHHHHHHCCCCCHHHHHHHHHHHHHHCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHH FQKNVAVQRWNNRFSMAMLE HHHHHHHHHHCCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]