| Definition | Staphylococcus aureus subsp. aureus JH9, complete genome. |
|---|---|
| Accession | NC_009487 |
| Length | 2,906,700 |
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The map label for this gene is yhcH [H]
Identifier: 148268405
GI number: 148268405
Start: 2121301
End: 2122173
Strand: Reverse
Name: yhcH [H]
Synonym: SaurJH9_1988
Alternate gene names: 148268405
Gene position: 2122173-2121301 (Counterclockwise)
Preceding gene: 148268406
Following gene: 148268404
Centisome position: 73.01
GC content: 28.87
Gene sequence:
>873_bases ATGAAATTAGAACATATTACAAAAAAATACGGCTCAAATGTCGTTTTAAATGATATTGATTTTGACTTTGGCGATAGTAG AATTGTCGGATTAATAGGAAAAAACGGTGTTGGTAAAACAACCATTATGAAAGTAATGAATGGTAATATTATTAAATTTG ATGGAAAAGTAGATATTGATAATGCAGATAATATCGGTTTTTTAATTGAGCATCCTAAATTATATGATAATAAATCAGGA TTGTATAACTTGAAATTATTTGCACAAGTATTAGGTAAGGGTTTTGATAAAGCATACACAGACAAAATTATAGATGCATT TGGTATGAGACCTTATATTAAAAAGAAAGTTAAGAAATATTCAATGGGGATGAAGCAAAAGTTAGCAATTGCAGTATCTT TAATGAATAAACCTAAATTTTTAATCTTGGATGAGCCTACAAATGGTATGGATCCAGATGGCTCAATTGATGTGCTGACT ACAATTAAGTCTTTAGTAAATGAACTTGATATGAGAATTCTAATATCAAGTCATAAGTTAGAAGATATTGAATTAATTTG TGATAGAGCTGTATTTTTAAGAGACGGACATTTTGTTCAAGATGTAAACATGGAGGTAGGTGTTGCATCTGACACAACGA TAGTTACTGTTGATCATAAAGACTTTGATAGAACTGAAAAATATCTTGCAGAGCATTTCCAATTACAAAATGTCGACAAA GCAGACGGACATTTAATGATCAATGCACAAAAAAATTATCAAGTTATACTAAAAGCATTATCTGAATTAGATATTTATCC GAAATATATTGAAACACGTAAAAGTTCATTGCGTGATACGTACTTCAATATAAATCAAAGAGGTGATAAATAA
Upstream 100 bases:
>100_bases TAAATATTGGTTTTCTAATTATCAGCATTGTTATACTTATTGTTAATTATTTTAAACAGCTCAATAAAATAAATACTAGA AAATTTAAAGGAGGCAGTCG
Downstream 100 bases:
>100_bases TGAGAATTTTAAATTTAGTTAAGTATGATTTTTATAGTATATTTAAAAGTCCTTTAACATATTTAGCGATACTAGTCGTA TCTAGTTTGATTGCAACTCA
Product: ABC transporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 290; Mature: 290
Protein sequence:
>290_residues MKLEHITKKYGSNVVLNDIDFDFGDSRIVGLIGKNGVGKTTIMKVMNGNIIKFDGKVDIDNADNIGFLIEHPKLYDNKSG LYNLKLFAQVLGKGFDKAYTDKIIDAFGMRPYIKKKVKKYSMGMKQKLAIAVSLMNKPKFLILDEPTNGMDPDGSIDVLT TIKSLVNELDMRILISSHKLEDIELICDRAVFLRDGHFVQDVNMEVGVASDTTIVTVDHKDFDRTEKYLAEHFQLQNVDK ADGHLMINAQKNYQVILKALSELDIYPKYIETRKSSLRDTYFNINQRGDK
Sequences:
>Translated_290_residues MKLEHITKKYGSNVVLNDIDFDFGDSRIVGLIGKNGVGKTTIMKVMNGNIIKFDGKVDIDNADNIGFLIEHPKLYDNKSG LYNLKLFAQVLGKGFDKAYTDKIIDAFGMRPYIKKKVKKYSMGMKQKLAIAVSLMNKPKFLILDEPTNGMDPDGSIDVLT TIKSLVNELDMRILISSHKLEDIELICDRAVFLRDGHFVQDVNMEVGVASDTTIVTVDHKDFDRTEKYLAEHFQLQNVDK ADGHLMINAQKNYQVILKALSELDIYPKYIETRKSSLRDTYFNINQRGDK >Mature_290_residues MKLEHITKKYGSNVVLNDIDFDFGDSRIVGLIGKNGVGKTTIMKVMNGNIIKFDGKVDIDNADNIGFLIEHPKLYDNKSG LYNLKLFAQVLGKGFDKAYTDKIIDAFGMRPYIKKKVKKYSMGMKQKLAIAVSLMNKPKFLILDEPTNGMDPDGSIDVLT TIKSLVNELDMRILISSHKLEDIELICDRAVFLRDGHFVQDVNMEVGVASDTTIVTVDHKDFDRTEKYLAEHFQLQNVDK ADGHLMINAQKNYQVILKALSELDIYPKYIETRKSSLRDTYFNINQRGDK
Specific function: Unknown
COG id: COG1131
COG function: function code V; ABC-type multidrug transport system, ATPase component
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transporter domain [H]
Homologues:
Organism=Homo sapiens, GI6005701, Length=198, Percent_Identity=27.2727272727273, Blast_Score=99, Evalue=3e-21, Organism=Homo sapiens, GI27477115, Length=198, Percent_Identity=27.7777777777778, Blast_Score=98, Evalue=9e-21, Organism=Homo sapiens, GI30795238, Length=292, Percent_Identity=26.3698630136986, Blast_Score=94, Evalue=2e-19, Organism=Homo sapiens, GI27881501, Length=292, Percent_Identity=26.3698630136986, Blast_Score=93, Evalue=2e-19, Organism=Homo sapiens, GI27262624, Length=210, Percent_Identity=26.1904761904762, Blast_Score=92, Evalue=5e-19, Organism=Homo sapiens, GI27262626, Length=210, Percent_Identity=26.1904761904762, Blast_Score=92, Evalue=5e-19, Organism=Homo sapiens, GI153792144, Length=215, Percent_Identity=28.3720930232558, Blast_Score=91, Evalue=8e-19, Organism=Homo sapiens, GI27436953, Length=198, Percent_Identity=25.7575757575758, Blast_Score=86, Evalue=3e-17, Organism=Homo sapiens, GI31657092, Length=211, Percent_Identity=28.436018957346, Blast_Score=83, Evalue=3e-16, Organism=Homo sapiens, GI45446740, Length=215, Percent_Identity=26.046511627907, Blast_Score=82, Evalue=4e-16, Organism=Homo sapiens, GI47078218, Length=215, Percent_Identity=26.046511627907, Blast_Score=82, Evalue=4e-16, Organism=Homo sapiens, GI105990541, Length=231, Percent_Identity=26.8398268398268, Blast_Score=81, Evalue=1e-15, Organism=Homo sapiens, GI116734710, Length=181, Percent_Identity=29.8342541436464, Blast_Score=80, Evalue=2e-15, Organism=Homo sapiens, GI150417984, Length=183, Percent_Identity=26.2295081967213, Blast_Score=78, Evalue=8e-15, Organism=Homo sapiens, GI21536376, Length=183, Percent_Identity=27.8688524590164, Blast_Score=76, Evalue=3e-14, Organism=Escherichia coli, GI87081782, Length=213, Percent_Identity=30.0469483568075, Blast_Score=101, Evalue=5e-23, Organism=Escherichia coli, GI1787089, Length=221, Percent_Identity=26.2443438914027, Blast_Score=93, Evalue=2e-20, Organism=Escherichia coli, GI48994943, Length=205, Percent_Identity=28.780487804878, Blast_Score=90, Evalue=1e-19, Organism=Escherichia coli, GI1788225, Length=226, Percent_Identity=26.5486725663717, Blast_Score=89, Evalue=3e-19, Organism=Escherichia coli, GI1787029, Length=223, Percent_Identity=26.0089686098655, Blast_Score=89, Evalue=5e-19, Organism=Escherichia coli, GI1788165, Length=192, Percent_Identity=28.6458333333333, Blast_Score=88, Evalue=7e-19, Organism=Escherichia coli, GI1788761, Length=215, Percent_Identity=25.1162790697674, Blast_Score=86, Evalue=4e-18, Organism=Escherichia coli, GI1789751, Length=206, Percent_Identity=24.7572815533981, Blast_Score=84, Evalue=9e-18, Organism=Escherichia coli, GI1789672, Length=249, Percent_Identity=27.3092369477912, Blast_Score=83, Evalue=2e-17, Organism=Escherichia coli, GI1788506, Length=211, Percent_Identity=27.9620853080569, Blast_Score=83, Evalue=2e-17, Organism=Escherichia coli, GI1786872, Length=216, Percent_Identity=28.7037037037037, Blast_Score=82, Evalue=3e-17, Organism=Escherichia coli, GI87081709, Length=211, Percent_Identity=25.5924170616114, Blast_Score=82, Evalue=5e-17, Organism=Escherichia coli, GI1786319, Length=321, Percent_Identity=24.6105919003115, Blast_Score=82, Evalue=6e-17, Organism=Escherichia coli, GI48994997, Length=222, Percent_Identity=25.6756756756757, Blast_Score=81, Evalue=7e-17, Organism=Escherichia coli, GI1786398, Length=227, Percent_Identity=25.9911894273128, Blast_Score=80, Evalue=1e-16, Organism=Escherichia coli, GI1790544, Length=230, Percent_Identity=22.1739130434783, Blast_Score=80, Evalue=2e-16, Organism=Escherichia coli, GI1789593, Length=250, Percent_Identity=24.4, Blast_Score=78, Evalue=7e-16, Organism=Escherichia coli, GI1787370, Length=219, Percent_Identity=25.1141552511416, Blast_Score=78, Evalue=8e-16, Organism=Escherichia coli, GI1786345, Length=225, Percent_Identity=24.4444444444444, Blast_Score=78, Evalue=8e-16, Organism=Escherichia coli, GI48994883, Length=228, Percent_Identity=27.6315789473684, Blast_Score=74, Evalue=9e-15, Organism=Escherichia coli, GI1790190, Length=218, Percent_Identity=27.0642201834862, Blast_Score=74, Evalue=1e-14, Organism=Escherichia coli, GI1787164, Length=207, Percent_Identity=23.6714975845411, Blast_Score=74, Evalue=1e-14, Organism=Escherichia coli, GI1790525, Length=234, Percent_Identity=27.3504273504274, Blast_Score=73, Evalue=2e-14, Organism=Escherichia coli, GI48995001, Length=217, Percent_Identity=25.3456221198157, Blast_Score=72, Evalue=3e-14, Organism=Escherichia coli, GI1788450, Length=243, Percent_Identity=23.8683127572016, Blast_Score=70, Evalue=1e-13, Organism=Escherichia coli, GI1786253, Length=210, Percent_Identity=24.2857142857143, Blast_Score=69, Evalue=3e-13, Organism=Escherichia coli, GI87081791, Length=211, Percent_Identity=21.8009478672986, Blast_Score=69, Evalue=3e-13, Organism=Escherichia coli, GI1790467, Length=211, Percent_Identity=23.2227488151659, Blast_Score=69, Evalue=4e-13, Organism=Escherichia coli, GI1787758, Length=240, Percent_Identity=22.0833333333333, Blast_Score=68, Evalue=5e-13, Organism=Escherichia coli, GI1787792, Length=203, Percent_Identity=27.0935960591133, Blast_Score=67, Evalue=1e-12, Organism=Escherichia coli, GI1789864, Length=219, Percent_Identity=22.3744292237443, Blast_Score=67, Evalue=1e-12, Organism=Escherichia coli, GI1786563, Length=205, Percent_Identity=22.4390243902439, Blast_Score=67, Evalue=2e-12, Organism=Escherichia coli, GI1786803, Length=224, Percent_Identity=23.2142857142857, Blast_Score=65, Evalue=5e-12, Organism=Escherichia coli, GI1789873, Length=222, Percent_Identity=24.3243243243243, Blast_Score=65, Evalue=5e-12, Organism=Escherichia coli, GI1789991, Length=218, Percent_Identity=26.605504587156, Blast_Score=64, Evalue=8e-12, Organism=Escherichia coli, GI1788472, Length=217, Percent_Identity=27.1889400921659, Blast_Score=64, Evalue=1e-11, Organism=Escherichia coli, GI87081834, Length=228, Percent_Identity=21.0526315789474, Blast_Score=63, Evalue=2e-11, Organism=Caenorhabditis elegans, GI17510237, Length=202, Percent_Identity=28.2178217821782, Blast_Score=104, Evalue=5e-23, Organism=Caenorhabditis elegans, GI71983516, Length=202, Percent_Identity=27.7227722772277, Blast_Score=96, Evalue=2e-20, Organism=Caenorhabditis elegans, GI71983510, Length=202, Percent_Identity=27.7227722772277, Blast_Score=96, Evalue=2e-20, Organism=Caenorhabditis elegans, GI71983523, Length=202, Percent_Identity=27.7227722772277, Blast_Score=96, Evalue=2e-20, Organism=Caenorhabditis elegans, GI17565586, Length=248, Percent_Identity=24.5967741935484, Blast_Score=87, Evalue=7e-18, Organism=Caenorhabditis elegans, GI115533608, Length=212, Percent_Identity=27.8301886792453, Blast_Score=87, Evalue=8e-18, Organism=Caenorhabditis elegans, GI115534520, Length=225, Percent_Identity=26.6666666666667, Blast_Score=71, Evalue=8e-13, Organism=Drosophila melanogaster, GI221512771, Length=205, Percent_Identity=29.7560975609756, Blast_Score=99, Evalue=3e-21, Organism=Drosophila melanogaster, GI24643674, Length=208, Percent_Identity=27.8846153846154, Blast_Score=95, Evalue=5e-20, Organism=Drosophila melanogaster, GI24666092, Length=205, Percent_Identity=30.7317073170732, Blast_Score=93, Evalue=2e-19, Organism=Drosophila melanogaster, GI221500365, Length=204, Percent_Identity=24.5098039215686, Blast_Score=84, Evalue=8e-17, Organism=Drosophila melanogaster, GI116007184, Length=204, Percent_Identity=24.5098039215686, Blast_Score=84, Evalue=8e-17, Organism=Drosophila melanogaster, GI28573573, Length=209, Percent_Identity=25.8373205741627, Blast_Score=84, Evalue=1e-16, Organism=Drosophila melanogaster, GI28573571, Length=209, Percent_Identity=25.8373205741627, Blast_Score=84, Evalue=1e-16, Organism=Drosophila melanogaster, GI116007328, Length=216, Percent_Identity=25.462962962963, Blast_Score=82, Evalue=4e-16, Organism=Drosophila melanogaster, GI28574150, Length=216, Percent_Identity=25.462962962963, Blast_Score=82, Evalue=4e-16, Organism=Drosophila melanogaster, GI24648314, Length=214, Percent_Identity=25.7009345794392, Blast_Score=77, Evalue=1e-14, Organism=Drosophila melanogaster, GI281362751, Length=227, Percent_Identity=25.5506607929515, Blast_Score=73, Evalue=2e-13, Organism=Drosophila melanogaster, GI24666836, Length=165, Percent_Identity=27.2727272727273, Blast_Score=73, Evalue=3e-13, Organism=Drosophila melanogaster, GI24650853, Length=222, Percent_Identity=25.2252252252252, Blast_Score=72, Evalue=4e-13, Organism=Drosophila melanogaster, GI24650855, Length=222, Percent_Identity=25.2252252252252, Blast_Score=72, Evalue=4e-13, Organism=Drosophila melanogaster, GI24582014, Length=191, Percent_Identity=24.0837696335079, Blast_Score=67, Evalue=1e-11, Organism=Drosophila melanogaster, GI24582012, Length=191, Percent_Identity=24.0837696335079, Blast_Score=67, Evalue=1e-11, Organism=Drosophila melanogaster, GI24581191, Length=173, Percent_Identity=26.5895953757225, Blast_Score=67, Evalue=1e-11, Organism=Drosophila melanogaster, GI24581189, Length=173, Percent_Identity=26.5895953757225, Blast_Score=67, Evalue=1e-11, Organism=Drosophila melanogaster, GI24581193, Length=173, Percent_Identity=26.5895953757225, Blast_Score=67, Evalue=1e-11, Organism=Drosophila melanogaster, GI24581195, Length=173, Percent_Identity=26.5895953757225, Blast_Score=67, Evalue=1e-11, Organism=Drosophila melanogaster, GI85725262, Length=162, Percent_Identity=29.6296296296296, Blast_Score=66, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003439 - InterPro: IPR017871 - InterPro: IPR003593 [H]
Pfam domain/function: PF00005 ABC_tran [H]
EC number: NA
Molecular weight: Translated: 32937; Mature: 32937
Theoretical pI: Translated: 8.36; Mature: 8.36
Prosite motif: PS50893 ABC_TRANSPORTER_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLEHITKKYGSNVVLNDIDFDFGDSRIVGLIGKNGVGKTTIMKVMNGNIIKFDGKVDID CCCHHHHHHHCCCEEEECCCCCCCCCEEEEEECCCCCCHHHHHHHHCCCEEEECCEEECC NADNIGFLIEHPKLYDNKSGLYNLKLFAQVLGKGFDKAYTDKIIDAFGMRPYIKKKVKKY CCCCCEEEEECCEEECCCCCEEHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHH SMGMKQKLAIAVSLMNKPKFLILDEPTNGMDPDGSIDVLTTIKSLVNELDMRILISSHKL HCCHHHHHHHEEEECCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCEEEEEECCCC EDIELICDRAVFLRDGHFVQDVNMEVGVASDTTIVTVDHKDFDRTEKYLAEHFQLQNVDK CHHHHHHCCEEEEECCCEEEECCEEEEECCCCEEEEECCCCCHHHHHHHHHHHHHCCCCC ADGHLMINAQKNYQVILKALSELDIYPKYIETRKSSLRDTYFNINQRGDK CCCEEEEECCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHEECCCCCCC >Mature Secondary Structure MKLEHITKKYGSNVVLNDIDFDFGDSRIVGLIGKNGVGKTTIMKVMNGNIIKFDGKVDID CCCHHHHHHHCCCEEEECCCCCCCCCEEEEEECCCCCCHHHHHHHHCCCEEEECCEEECC NADNIGFLIEHPKLYDNKSGLYNLKLFAQVLGKGFDKAYTDKIIDAFGMRPYIKKKVKKY CCCCCEEEEECCEEECCCCCEEHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHH SMGMKQKLAIAVSLMNKPKFLILDEPTNGMDPDGSIDVLTTIKSLVNELDMRILISSHKL HCCHHHHHHHEEEECCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCEEEEEECCCC EDIELICDRAVFLRDGHFVQDVNMEVGVASDTTIVTVDHKDFDRTEKYLAEHFQLQNVDK CHHHHHHCCEEEEECCCEEEECCEEEEECCCCEEEEECCCCCHHHHHHHHHHHHHCCCCC ADGHLMINAQKNYQVILKALSELDIYPKYIETRKSSLRDTYFNINQRGDK CCCEEEEECCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8969498; 9384377 [H]