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The map label for this gene is gatC

Identifier: 148268374

GI number: 148268374

Start: 2088623

End: 2088925

Strand: Reverse

Name: gatC

Synonym: SaurJH9_1956

Alternate gene names: 148268374

Gene position: 2088925-2088623 (Counterclockwise)

Preceding gene: 148268376

Following gene: 148268373

Centisome position: 71.87

GC content: 35.97

Gene sequence:

>303_bases
ATGACAAAAGTAACACGTGAAGAAGTTGAGCATATCGCGAATCTTGCAAGACTTCAAATTTCTCCTGAAGAAACGGAAGA
AATGGCCAACACATTAGAAAGCATTTTAGATTTTGCAAAACAAAATGATAGCGCTGATACAGAAGGCGTTGAACCTACAT
ATCACGTTTTAGATTTACAAAACGTTTTACGTGAAGATAAAGCAATTAAAGGTATTCCGCAAGAATTAGCTTTGAAAAAT
GCCAAAGAAACAGAAGATGGACAATTTAAAGTGCCTACAATCATGAATGAGGAGGACGCGTAA

Upstream 100 bases:

>100_bases
AGTTTATATGAAATTAAAGTAGCACCTCATAAATACTTAGATTTTTAATTGGAAATTTGATACAATTTAGTGATGAATGA
CTTAAAGGAGGCTTTTATTA

Downstream 100 bases:

>100_bases
GATGAGCATTCGCTACGAATCGGTTGAGAATTTATTAACTTTAATAAAAGACAAAAAAATCAAACCATCTGATGTTGTTA
AAGATATATATGATGCAATT

Product: aspartyl/glutamyl-tRNA amidotransferase subunit C

Products: NA

Alternate protein names: Asp/Glu-ADT subunit C

Number of amino acids: Translated: 100; Mature: 99

Protein sequence:

>100_residues
MTKVTREEVEHIANLARLQISPEETEEMANTLESILDFAKQNDSADTEGVEPTYHVLDLQNVLREDKAIKGIPQELALKN
AKETEDGQFKVPTIMNEEDA

Sequences:

>Translated_100_residues
MTKVTREEVEHIANLARLQISPEETEEMANTLESILDFAKQNDSADTEGVEPTYHVLDLQNVLREDKAIKGIPQELALKN
AKETEDGQFKVPTIMNEEDA
>Mature_99_residues
TKVTREEVEHIANLARLQISPEETEEMANTLESILDFAKQNDSADTEGVEPTYHVLDLQNVLREDKAIKGIPQELALKNA
KETEDGQFKVPTIMNEEDA

Specific function: Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction take

COG id: COG0721

COG function: function code J; Asp-tRNAAsn/Glu-tRNAGln amidotransferase C subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gatC family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): GATC_STAA1 (A7X428)

Other databases:

- EMBL:   AP009324
- RefSeq:   YP_001442476.1
- ProteinModelPortal:   A7X428
- SMR:   A7X428
- STRING:   A7X428
- EnsemblBacteria:   EBSTAT00000003535
- GeneID:   5560509
- GenomeReviews:   AP009324_GR
- KEGG:   saw:SAHV_1886
- eggNOG:   COG0721
- GeneTree:   EBGT00050000024331
- HOGENOM:   HBG586403
- OMA:   PTSHAVP
- ProtClustDB:   PRK00034
- BioCyc:   SAUR418127:SAHV_1886-MONOMER
- GO:   GO:0006412
- HAMAP:   MF_00122
- InterPro:   IPR003837
- TIGRFAMs:   TIGR00135

Pfam domain/function: PF02686 Glu-tRNAGln

EC number: 6.3.5.-

Molecular weight: Translated: 11268; Mature: 11136

Theoretical pI: Translated: 4.10; Mature: 4.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTKVTREEVEHIANLARLQISPEETEEMANTLESILDFAKQNDSADTEGVEPTYHVLDLQ
CCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHH
NVLREDKAIKGIPQELALKNAKETEDGQFKVPTIMNEEDA
HHHHHHHHHCCCCHHHHHCCCCCCCCCCEECCCCCCCCCC
>Mature Secondary Structure 
TKVTREEVEHIANLARLQISPEETEEMANTLESILDFAKQNDSADTEGVEPTYHVLDLQ
CCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHH
NVLREDKAIKGIPQELALKNAKETEDGQFKVPTIMNEEDA
HHHHHHHHHCCCCHHHHHCCCCCCCCCCEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA