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The map label for this gene is yhbO [C]

Identifier: 148268347

GI number: 148268347

Start: 2063415

End: 2063930

Strand: Reverse

Name: yhbO [C]

Synonym: SaurJH9_1929

Alternate gene names: 148268347

Gene position: 2063930-2063415 (Counterclockwise)

Preceding gene: 148268348

Following gene: 148268346

Centisome position: 71.01

GC content: 35.08

Gene sequence:

>516_bases
ATGACTAAAAAAGTAGCAATTATTCTAGCAAACGAATTTGAAGATATAGAATATTCAAGTCCTAAAGAGGCATTAGAGAA
TGCTGGATTTAATACTGTAGTGATTGGGGATACTGCAAATAGTGAAGTTGTTGGTAAACACGGTGAAAAAGTTACTGTCG
ATGTAGGCATTGCAGAAGCTAAACCAGAAGATTATGATGCATTATTAATTCCTGGAGGATTTTCACCAGATCATTTACGT
GGAGATACAGAAGGTCGATATGGCACATTTGCTAAATACTTTACTAAAAATGATGTACCAACATTTGCCATTTGTCATGG
GCCACAAATACTAATAGATACAGATGATTTAAAAGGTCGTACGTTAACAGCAGTATTGAACGTGCGCAAAGATTTATCAA
ATGCAGGCGCACATGTAGTTGATGAGTCAGTAGTTGTAGACAACAATATTGTAACAAGTCGAGTACCAGACGATTTAGAT
GATTTTAATCGAGAAATCGTTAAACAATTACAATAG

Upstream 100 bases:

>100_bases
TCGCGATAGTCGCTTAATATTTTTTATATCTTGTATGTTTAATCACTGATTTACTTGTCTATAGTAATTATATCAATGAT
ATATAGAAATGTGATTTTCA

Downstream 100 bases:

>100_bases
AAGTATTGTGGTTATCGATTGTTAAAATTTATATATTTTCGTTTGAAATGAAATATGGATTTTAGTTTTAATAAATGAAT
AACAAATAAAAGGTCGTCTC

Product: PfpI family intracellular peptidase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 171; Mature: 170

Protein sequence:

>171_residues
MTKKVAIILANEFEDIEYSSPKEALENAGFNTVVIGDTANSEVVGKHGEKVTVDVGIAEAKPEDYDALLIPGGFSPDHLR
GDTEGRYGTFAKYFTKNDVPTFAICHGPQILIDTDDLKGRTLTAVLNVRKDLSNAGAHVVDESVVVDNNIVTSRVPDDLD
DFNREIVKQLQ

Sequences:

>Translated_171_residues
MTKKVAIILANEFEDIEYSSPKEALENAGFNTVVIGDTANSEVVGKHGEKVTVDVGIAEAKPEDYDALLIPGGFSPDHLR
GDTEGRYGTFAKYFTKNDVPTFAICHGPQILIDTDDLKGRTLTAVLNVRKDLSNAGAHVVDESVVVDNNIVTSRVPDDLD
DFNREIVKQLQ
>Mature_170_residues
TKKVAIILANEFEDIEYSSPKEALENAGFNTVVIGDTANSEVVGKHGEKVTVDVGIAEAKPEDYDALLIPGGFSPDHLRG
DTEGRYGTFAKYFTKNDVPTFAICHGPQILIDTDDLKGRTLTAVLNVRKDLSNAGAHVVDESVVVDNNIVTSRVPDDLDD
FNREIVKQLQ

Specific function: Unknown

COG id: COG0693

COG function: function code R; Putative intracellular protease/amidase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PfpI endopeptidase domain

Homologues:

Organism=Escherichia coli, GI87082219, Length=172, Percent_Identity=49.4186046511628, Blast_Score=164, Evalue=3e-42,
Organism=Drosophila melanogaster, GI28571932, Length=170, Percent_Identity=25.8823529411765, Blast_Score=69, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1692_STAAN (P0A0K1)

Other databases:

- EMBL:   BA000018
- PIR:   B89975
- RefSeq:   NP_374982.1
- ProteinModelPortal:   P0A0K1
- STRING:   P0A0K1
- EnsemblBacteria:   EBSTAT00000001682
- GeneID:   1124575
- GenomeReviews:   BA000018_GR
- KEGG:   sau:SA1692
- eggNOG:   COG0693
- GeneTree:   EBGT00050000025520
- HOGENOM:   HBG646910
- OMA:   QSELEVP
- ProtClustDB:   CLSK885618
- BioCyc:   SAUR158879:SA1692-MONOMER
- InterPro:   IPR006286
- InterPro:   IPR002818
- TIGRFAMs:   TIGR01382

Pfam domain/function: PF01965 DJ-1_PfpI

EC number: NA

Molecular weight: Translated: 18632; Mature: 18501

Theoretical pI: Translated: 4.36; Mature: 4.36

Prosite motif: PS51276 PEPTIDASE_C56_PFPI

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTKKVAIILANEFEDIEYSSPKEALENAGFNTVVIGDTANSEVVGKHGEKVTVDVGIAEA
CCCEEEEEEECCCCCCCCCCHHHHHHHCCCCEEEEECCCCCCEECCCCCEEEEEEEEECC
KPEDYDALLIPGGFSPDHLRGDTEGRYGTFAKYFTKNDVPTFAICHGPQILIDTDDLKGR
CCCCCCEEEECCCCCHHHCCCCCCCCCCHHHEEHCCCCCCEEEEECCCEEEEECCCCCCC
TLTAVLNVRKDLSNAGAHVVDESVVVDNNIVTSRVPDDLDDFNREIVKQLQ
EEEHHHHHHHHHHCCCCEEECCEEEECCCEEECCCCCCHHHHHHHHHHHCC
>Mature Secondary Structure 
TKKVAIILANEFEDIEYSSPKEALENAGFNTVVIGDTANSEVVGKHGEKVTVDVGIAEA
CCEEEEEEECCCCCCCCCCHHHHHHHCCCCEEEEECCCCCCEECCCCCEEEEEEEEECC
KPEDYDALLIPGGFSPDHLRGDTEGRYGTFAKYFTKNDVPTFAICHGPQILIDTDDLKGR
CCCCCCEEEECCCCCHHHCCCCCCCCCCHHHEEHCCCCCCEEEEECCCEEEEECCCCCCC
TLTAVLNVRKDLSNAGAHVVDESVVVDNNIVTSRVPDDLDDFNREIVKQLQ
EEEHHHHHHHHHHCCCCEEECCEEEECCCEEECCCCCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11418146