| Definition | Staphylococcus aureus subsp. aureus JH9, complete genome. |
|---|---|
| Accession | NC_009487 |
| Length | 2,906,700 |
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The map label for this gene is atl [H]
Identifier: 148268250
GI number: 148268250
Start: 1955639
End: 1956493
Strand: Reverse
Name: atl [H]
Synonym: SaurJH9_1827
Alternate gene names: 148268250
Gene position: 1956493-1955639 (Counterclockwise)
Preceding gene: 148268251
Following gene: 148268247
Centisome position: 67.31
GC content: 30.88
Gene sequence:
>855_bases ATGAATAAACACAAGAAAGGTTCTATTTTTGGAATAATAGGACTTGTTGTCATATTTGCTGTTGTCTCATTTTTATTTTT CTCAATGATATCCGATCAGATATTTTTCAAACATGTTAAATCCGACATTAAGATTGAAAAGTTAAATGTTACATTAAACG ATGCAGCAAAGAAACAAATAAATAATTATACGAGTCAACAGGTATCAAATAAAAAGAATGATGCATGGAGAGATGCATCT GCAACTGAAATTAAAAGTGCAATGGATAGCGGTACTTTTATCGATAATGAAAAGCAAAAATATCAATTTTTAGATTTATC AAAGTATCAAGGGATTGATAAAAATAGAATTAAACGTATGTTAGTAGATAGACCAACGTTATTGAAACATACGGATGATT TCTTAAAAGCTGCTAAAGATAAGCACGTTAACGAAGTTTATTTAATTTCACATGCATTATTAGAAACTGGCGCAGTTAAA AGTGAATTAGCTAATGGAGTCGAAATTGATGGCAAAAAATACTACAATTTCTATGGAGTAGGAGCCCTTGATAAAGACCC AATTAAAACAGGTGCAGAATATGCTAAAAAGCATGGTTGGGATACACCTGAAAAAGCTATTTCAGGCGGTGCTGATTTCA TTCATAAGCACTTCTTATCAAGCACAGATCAAAATACATTGTATAGTATGAGATGGAATCCAAAAAATCCAGGAGAACAT CAATATGCTACTGATATTAAGTGGGCAGAAAGTAATGCAACAATTATCGCTGACTTTTATAAGAATATGAAGACTGAAGG AAAATACTTCAAATACTTTGTGTATAAAGATGACAGTAAACATTTGAATAAGTAA
Upstream 100 bases:
>100_bases ACAATGCATAGATAAAATTGTTAAACGGTTTTAATAATGTTAAACTTTATTATCGTAGTCAAACTGAATGTATAACAACA ATGACCTAAGAGGTGTGGAT
Downstream 100 bases:
>100_bases TTTGATAGAGTTAAGTTATGATATAACTTGCTCAAGTATAAAAAGACGCTTTCTATCGCAATAAATAGAAAGCGTCTTTT TATTTCTTAAAATATGATAA
Product: mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase
Products: NA
Alternate protein names: N-acetylmuramoyl-L-alanine amidase; Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase [H]
Number of amino acids: Translated: 284; Mature: 284
Protein sequence:
>284_residues MNKHKKGSIFGIIGLVVIFAVVSFLFFSMISDQIFFKHVKSDIKIEKLNVTLNDAAKKQINNYTSQQVSNKKNDAWRDAS ATEIKSAMDSGTFIDNEKQKYQFLDLSKYQGIDKNRIKRMLVDRPTLLKHTDDFLKAAKDKHVNEVYLISHALLETGAVK SELANGVEIDGKKYYNFYGVGALDKDPIKTGAEYAKKHGWDTPEKAISGGADFIHKHFLSSTDQNTLYSMRWNPKNPGEH QYATDIKWAESNATIIADFYKNMKTEGKYFKYFVYKDDSKHLNK
Sequences:
>Translated_284_residues MNKHKKGSIFGIIGLVVIFAVVSFLFFSMISDQIFFKHVKSDIKIEKLNVTLNDAAKKQINNYTSQQVSNKKNDAWRDAS ATEIKSAMDSGTFIDNEKQKYQFLDLSKYQGIDKNRIKRMLVDRPTLLKHTDDFLKAAKDKHVNEVYLISHALLETGAVK SELANGVEIDGKKYYNFYGVGALDKDPIKTGAEYAKKHGWDTPEKAISGGADFIHKHFLSSTDQNTLYSMRWNPKNPGEH QYATDIKWAESNATIIADFYKNMKTEGKYFKYFVYKDDSKHLNK >Mature_284_residues MNKHKKGSIFGIIGLVVIFAVVSFLFFSMISDQIFFKHVKSDIKIEKLNVTLNDAAKKQINNYTSQQVSNKKNDAWRDAS ATEIKSAMDSGTFIDNEKQKYQFLDLSKYQGIDKNRIKRMLVDRPTLLKHTDDFLKAAKDKHVNEVYLISHALLETGAVK SELANGVEIDGKKYYNFYGVGALDKDPIKTGAEYAKKHGWDTPEKAISGGADFIHKHFLSSTDQNTLYSMRWNPKNPGEH QYATDIKWAESNATIIADFYKNMKTEGKYFKYFVYKDDSKHLNK
Specific function: Endohydrolysis of the di-N-acetylchitobiosyl unit in high-mannose glycopeptides and glycoproteins containing the -[(Man)5(GlcNAc)2]-Asn structure. One N-acetyl-D-glucosamine residue remains attached to the protein; the rest of the oligosaccharide is relea
COG id: COG4193
COG function: function code G; Beta- N-acetylglucosaminidase
Gene ontology:
Cell location: Secreted. Note=Secreted, and then anchored on the cell surface at the peripheral cell wall above the completed septum (septal region), for the next cell division cycle (By similarity) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: In the C-terminal section; belongs to the glycosyl hydrolase 73 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002502 - InterPro: IPR013338 - InterPro: IPR002901 [H]
Pfam domain/function: PF01510 Amidase_2; PF01832 Glucosaminidase [H]
EC number: =3.5.1.28; =3.2.1.96 [H]
Molecular weight: Translated: 32506; Mature: 32506
Theoretical pI: Translated: 9.79; Mature: 9.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKHKKGSIFGIIGLVVIFAVVSFLFFSMISDQIFFKHVKSDIKIEKLNVTLNDAAKKQI CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEHHHHHHHHH NNYTSQQVSNKKNDAWRDASATEIKSAMDSGTFIDNEKQKYQFLDLSKYQGIDKNRIKRM HHHHHHHHHCCCCHHHCCCHHHHHHHHHCCCCEECCCCHHHHEECHHHHCCCCHHHHHHH LVDRPTLLKHTDDFLKAAKDKHVNEVYLISHALLETGAVKSELANGVEIDGKKYYNFYGV HHCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCEECCEEEEEEEEE GALDKDPIKTGAEYAKKHGWDTPEKAISGGADFIHKHFLSSTDQNTLYSMRWNPKNPGEH CCCCCCHHHHHHHHHHHCCCCCHHHHHCCCHHHHHHHHHCCCCCCCEEEEECCCCCCCCC QYATDIKWAESNATIIADFYKNMKTEGKYFKYFVYKDDSKHLNK CCCCCCEECCCCCEEHHHHHHCCCCCCCEEEEEEEECCHHCCCC >Mature Secondary Structure MNKHKKGSIFGIIGLVVIFAVVSFLFFSMISDQIFFKHVKSDIKIEKLNVTLNDAAKKQI CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEHHHHHHHHH NNYTSQQVSNKKNDAWRDASATEIKSAMDSGTFIDNEKQKYQFLDLSKYQGIDKNRIKRM HHHHHHHHHCCCCHHHCCCHHHHHHHHHCCCCEECCCCHHHHEECHHHHCCCCHHHHHHH LVDRPTLLKHTDDFLKAAKDKHVNEVYLISHALLETGAVKSELANGVEIDGKKYYNFYGV HHCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCEECCEEEEEEEEE GALDKDPIKTGAEYAKKHGWDTPEKAISGGADFIHKHFLSSTDQNTLYSMRWNPKNPGEH CCCCCCHHHHHHHHHHHCCCCCHHHHHCCCHHHHHHHHHCCCCCCCEEEEECCCCCCCCC QYATDIKWAESNATIIADFYKNMKTEGKYFKYFVYKDDSKHLNK CCCCCCEECCCCCEEHHHHHHCCCCCCCEEEEEEEECCHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA