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The map label for this gene is 148268106

Identifier: 148268106

GI number: 148268106

Start: 1782119

End: 1782301

Strand: Reverse

Name: 148268106

Synonym: SaurJH9_1683

Alternate gene names: NA

Gene position: 1782301-1782119 (Counterclockwise)

Preceding gene: 148268107

Following gene: 148268105

Centisome position: 61.32

GC content: 29.51

Gene sequence:

>183_bases
ATGGCAGACGAAAGTAAGTTCGATCAATTTAAAGGAAATGTTAAAGAAACAGTAGGTAACGTTACTGATAACAAAGAATT
AGAAAAAGAAGGTCAGCAAGATAAAGCGACTGGTAAAGCAAAAGAAGTTGTTGAAAATGCTAAAAACAAAATAACTGATG
CAATTGATAAACTTAAAAAATAA

Upstream 100 bases:

>100_bases
ATCGTATAAATACTATACTATAACATAAAAACTTCATATTATAATGTTTAGCGAACCTCCTTAGTGGTATATAAATATAT
ACATCCAAGGAGGTTTCACT

Downstream 100 bases:

>100_bases
GTTCAATTAAACTAATCAAATATAAGAGGAGCGATTAATATGAGTTTTATGGATAAAGCTAAAGACGCAGTAGAAAAATT
TAAAAATAGCGATAATGAAC

Product: CsbD family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 60; Mature: 59

Protein sequence:

>60_residues
MADESKFDQFKGNVKETVGNVTDNKELEKEGQQDKATGKAKEVVENAKNKITDAIDKLKK

Sequences:

>Translated_60_residues
MADESKFDQFKGNVKETVGNVTDNKELEKEGQQDKATGKAKEVVENAKNKITDAIDKLKK
>Mature_59_residues
ADESKFDQFKGNVKETVGNVTDNKELEKEGQQDKATGKAKEVVENAKNKITDAIDKLKK

Specific function: Unknown

COG id: COG3237

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0337 (CsbD) family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1452_STAAN (Q7A593)

Other databases:

- EMBL:   BA000018
- PIR:   H89944
- RefSeq:   NP_374738.1
- ProteinModelPortal:   Q7A593
- SMR:   Q7A593
- STRING:   Q7A593
- EnsemblBacteria:   EBSTAT00000000729
- GeneID:   1124295
- GenomeReviews:   BA000018_GR
- KEGG:   sau:SA1452
- eggNOG:   COG3237
- GeneTree:   EBGT00050000023817
- HOGENOM:   HBG704474
- OMA:   MSLENKF
- ProtClustDB:   CLSK884942
- BioCyc:   SAUR158879:SA1452-MONOMER
- InterPro:   IPR008462
- Gene3D:   G3DSA:1.10.1470.10

Pfam domain/function: PF05532 CsbD; SSF69047 CsbD

EC number: NA

Molecular weight: Translated: 6683; Mature: 6551

Theoretical pI: Translated: 6.84; Mature: 6.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MADESKFDQFKGNVKETVGNVTDNKELEKEGQQDKATGKAKEVVENAKNKITDAIDKLKK
CCCCHHHHHHCCHHHHHHCCCCCCHHHHHHCCHHHHCCHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
ADESKFDQFKGNVKETVGNVTDNKELEKEGQQDKATGKAKEVVENAKNKITDAIDKLKK
CCCHHHHHHCCHHHHHHCCCCCCHHHHHHCCHHHHCCHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11418146