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The map label for this gene is rpe [H]

Identifier: 148267713

GI number: 148267713

Start: 1330060

End: 1330704

Strand: Direct

Name: rpe [H]

Synonym: SaurJH9_1281

Alternate gene names: 148267713

Gene position: 1330060-1330704 (Clockwise)

Preceding gene: 148267712

Following gene: 148267714

Centisome position: 45.76

GC content: 32.87

Gene sequence:

>645_bases
ATGACAAAACTATATCCATCATTATTATCTGTTGATTTTTTGGATTTACAACATGAATTAAAGCGACTTGAAGAAGCAGG
TGTCGACGGAGTTCATTTTGATGTTATGGATGGTCAATTTGTGCCTAATATATCTATTGGTTTACCAATATTAGATGCAG
TAAGAAAAGGCACAACATTACCTATAGACGTACATTTGATGATTGAAAATCCAGAAAAGTATATTGCATCATTTGCAGAA
CATGGTGCCGATATGATTTCAATTCATGTCGAATCAACGCCTCATATTCATCGTGCTATTCAAATGATTAAACATTTAGA
TAAAAAAGCTGGTGTAGTAATTAATCCTGGTACACCAATATCACAAATTGAACCTATTTTAGACATTGTTGATTATGTAT
TAGTGATGACAGTTAACCCAGGGTTTGGTGGTCAATCATTTATTGATCAATGCGTAGAAAAAATAGCGGGTCTTAATGCT
ATTAAAATGGAACGTCAATTAAACTTTGATATTGAAGTTGATGGAGGCGTAAATACCGATACAGCGAAAGTTTGTGTTGA
AAATGGTGCTACAATGCTAGTAACAGGTTCATTTTTCTTTAAACAAGAAGATTATAAAAAAGTCACACAAGCATTGAAAG
GTTGA

Upstream 100 bases:

>100_bases
TGTTAAGCATCAATTAGAGATAGGGAATATTGCGCAATTTAGATACGACCATTATTTACAACTATTTAATGAAATTTCAA
ATAGAAAGGTTAGATATTAA

Downstream 100 bases:

>100_bases
GTGTATATGCATATAAATTTATTATGTTCTAATCGACACTTGCCGCAAGATATTTGGGCCAAAAGTAATGAAGGTAAATG
GGGCGGCGTTGATAGAGGTG

Product: ribulose-phosphate 3-epimerase

Products: NA

Alternate protein names: Pentose-5-phosphate 3-epimerase; PPE; R5P3E [H]

Number of amino acids: Translated: 214; Mature: 213

Protein sequence:

>214_residues
MTKLYPSLLSVDFLDLQHELKRLEEAGVDGVHFDVMDGQFVPNISIGLPILDAVRKGTTLPIDVHLMIENPEKYIASFAE
HGADMISIHVESTPHIHRAIQMIKHLDKKAGVVINPGTPISQIEPILDIVDYVLVMTVNPGFGGQSFIDQCVEKIAGLNA
IKMERQLNFDIEVDGGVNTDTAKVCVENGATMLVTGSFFFKQEDYKKVTQALKG

Sequences:

>Translated_214_residues
MTKLYPSLLSVDFLDLQHELKRLEEAGVDGVHFDVMDGQFVPNISIGLPILDAVRKGTTLPIDVHLMIENPEKYIASFAE
HGADMISIHVESTPHIHRAIQMIKHLDKKAGVVINPGTPISQIEPILDIVDYVLVMTVNPGFGGQSFIDQCVEKIAGLNA
IKMERQLNFDIEVDGGVNTDTAKVCVENGATMLVTGSFFFKQEDYKKVTQALKG
>Mature_213_residues
TKLYPSLLSVDFLDLQHELKRLEEAGVDGVHFDVMDGQFVPNISIGLPILDAVRKGTTLPIDVHLMIENPEKYIASFAEH
GADMISIHVESTPHIHRAIQMIKHLDKKAGVVINPGTPISQIEPILDIVDYVLVMTVNPGFGGQSFIDQCVEKIAGLNAI
KMERQLNFDIEVDGGVNTDTAKVCVENGATMLVTGSFFFKQEDYKKVTQALKG

Specific function: Unknown

COG id: COG0036

COG function: function code G; Pentose-5-phosphate-3-epimerase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribulose-phosphate 3-epimerase family [H]

Homologues:

Organism=Homo sapiens, GI40385883, Length=214, Percent_Identity=38.785046728972, Blast_Score=160, Evalue=6e-40,
Organism=Homo sapiens, GI219879828, Length=214, Percent_Identity=36.4485981308411, Blast_Score=148, Evalue=4e-36,
Organism=Homo sapiens, GI24307923, Length=168, Percent_Identity=33.3333333333333, Blast_Score=100, Evalue=9e-22,
Organism=Escherichia coli, GI1789788, Length=209, Percent_Identity=43.5406698564593, Blast_Score=180, Evalue=8e-47,
Organism=Escherichia coli, GI1790523, Length=196, Percent_Identity=36.734693877551, Blast_Score=144, Evalue=5e-36,
Organism=Escherichia coli, GI1790754, Length=205, Percent_Identity=30.2439024390244, Blast_Score=105, Evalue=2e-24,
Organism=Caenorhabditis elegans, GI17552948, Length=204, Percent_Identity=35.7843137254902, Blast_Score=140, Evalue=5e-34,
Organism=Saccharomyces cerevisiae, GI6322341, Length=223, Percent_Identity=35.8744394618834, Blast_Score=146, Evalue=3e-36,
Organism=Drosophila melanogaster, GI24586301, Length=213, Percent_Identity=39.4366197183099, Blast_Score=160, Evalue=4e-40,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR000056
- InterPro:   IPR011060 [H]

Pfam domain/function: PF00834 Ribul_P_3_epim [H]

EC number: =5.1.3.1 [H]

Molecular weight: Translated: 23573; Mature: 23441

Theoretical pI: Translated: 4.91; Mature: 4.91

Prosite motif: PS01085 RIBUL_P_3_EPIMER_1 ; PS01086 RIBUL_P_3_EPIMER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTKLYPSLLSVDFLDLQHELKRLEEAGVDGVHFDVMDGQFVPNISIGLPILDAVRKGTTL
CCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCHHHHHHHCCCCC
PIDVHLMIENPEKYIASFAEHGADMISIHVESTPHIHRAIQMIKHLDKKAGVVINPGTPI
EEEEEEEEECHHHHHHHHHHCCCEEEEEEECCCCHHHHHHHHHHHHHHHCCEEECCCCCH
SQIEPILDIVDYVLVMTVNPGFGGQSFIDQCVEKIAGLNAIKMERQLNFDIEVDGGVNTD
HHHHHHHHHHHHHEEEEECCCCCCHHHHHHHHHHHHCCCCEEHHHHCCEEEEECCCCCCC
TAKVCVENGATMLVTGSFFFKQEDYKKVTQALKG
HHHHHCCCCCEEEEECCHHHCHHHHHHHHHHHCC
>Mature Secondary Structure 
TKLYPSLLSVDFLDLQHELKRLEEAGVDGVHFDVMDGQFVPNISIGLPILDAVRKGTTL
CCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCHHHHHHHCCCCC
PIDVHLMIENPEKYIASFAEHGADMISIHVESTPHIHRAIQMIKHLDKKAGVVINPGTPI
EEEEEEEEECHHHHHHHHHHCCCEEEEEEECCCCHHHHHHHHHHHHHHHCCEEECCCCCH
SQIEPILDIVDYVLVMTVNPGFGGQSFIDQCVEKIAGLNAIKMERQLNFDIEVDGGVNTD
HHHHHHHHHHHHHEEEEECCCCCCHHHHHHHHHHHHCCCCEEHHHHCCEEEEECCCCCCC
TAKVCVENGATMLVTGSFFFKQEDYKKVTQALKG
HHHHHCCCCCEEEEECCHHHCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9534248; 9384377 [H]