Click here to switch to the map view.

The map label for this gene is 148267654

Identifier: 148267654

GI number: 148267654

Start: 1263662

End: 1264981

Strand: Direct

Name: 148267654

Synonym: SaurJH9_1221

Alternate gene names: NA

Gene position: 1263662-1264981 (Clockwise)

Preceding gene: 148267650

Following gene: 148267656

Centisome position: 43.47

GC content: 30.91

Gene sequence:

>1320_bases
ATGTGTAATGATACCTTAGAATTACTAAGAATAAAAGATGAAAATATAAAATATATAAACCAAGAAATTGACGTCATTAT
CAAAGGAAAAAAAGCAACAGTGGTTAATGCTGTACTAACGTATAAGCCTTCGGCCTGTTATTGTTGTGGAGTTAAAAATG
AAGGACAAATTCATAAACATGGTAAGCGTGTTTCTCGTATTACTTTACTTAAAACTCAAGGGTATAACACATACCTCAAC
TTAGCTAAACAACGTTTTAAATGCTTAGAATGCAATGGCACTTTTACTGCTAAAACGTCAATTGTTGATGAGTCGTGTTT
TATCTCAAGATGTGTTACTCAAAAAGTTATAGAAGAAGCTACTAAAGTTAAAACAGAGATTGATACTGCAGAAGATAACT
GTATCTCTCCATCTACTGTAAGTCGTATTAGAACTAAAGCGGCTAATTCATTACGAATTAAACCGTTTAATTGTTTGCCA
GAACACATCGCTATGGATGAATTTAAAAGCGTTAAAAATGTAACTGGATCAATGAGTTTCATTTTTATAGATAATGATAC
TCATGATGTTATAGATATTTTAGAAAATAGAACTACAAGATTCTTGCGTGCCTATTTCGAGCGATTCGATTTAAAAAATC
GACAACAAGTTAAGACGGTTACTATTGACATGTATGAACCCTATGTCCGATTATTTCGCGACCTATTTCCTAATGCAGCT
ATTATTTTTGACAGATTCCATATCGTTCAACATTTAAATAGGGAACTTAATAAGTATCGTGTACAAGTTATGAATGAATA
CCGTAATAAAAAAGGACCTAATTATACAATTTTTAAGAATAACTGGAAAGTTCTATTGATGGATACTAGTAAAACCATAT
TTAGTAAATACAGATGGAATAAATCTTTTAAGGCTTATAAACGCTCATCTGACATTGTAGAATTCATGCTTTCAAAAGAC
GATATACTACGACGCTCCTACGAACTTGTCCAAGGATTAAGAAAAGATCTAAGGTTATGTAATTGGCCTAAATTTATTAA
TCGTTTAAATTCAGTTAGTAAAAAGTCTGTGAGTAAAGGTGTATGGAAAGTGGTTAAATATTATAGAAAACATCAAAGGA
TGTTAAGAAATACAATTTATTACCCAGCATTTAATAATGGTGCTATAGAAGGAATTAATAATAAGATAAAATTAATCAAG
CGAATTTCTTTTGGTTACAGAAATTTCAACAACTTTAAAGCACGTATAATGATGATTTTCAGCTTATACAAAGGAGAAAA
AAAGAAGACAACCAAGCCCAATAATGGACTGGCCGCCTAA

Upstream 100 bases:

>100_bases
TGGGAAGGTAAAACTTCCTGCTTTTTTTAATACACAAAAAGCGCAATTGCCTCTATAATTTAAAGTGACCAAACCCAAAC
TAAAGGAGACAAGTGCGCCT

Downstream 100 bases:

>100_bases
TAATAAAAACTCTAAAAGTTGTAATTTAAAATAGTTCTTTAAATTATATACCCACCACATTTGGTGGAGAACCAAAAATT
AGCCGAAAAACATCATTTCT

Product: transposase, IS204/IS1001/IS1096/IS1165 family protein

Products: NA

Alternate protein names: LOW QUALITY PROTEIN Transposase; Truncated; Transposase Subfamily; Transposase IS; Truncated Transposase; Degenerate Transposase; Transposase Tnpa Isl3 Family; Transposase ISLasa4v; ISL3 Family Transposase; Transposase For IS; Transposase TnpA ISL3 Family; Low Quality Protein

Number of amino acids: Translated: 439; Mature: 439

Protein sequence:

>439_residues
MCNDTLELLRIKDENIKYINQEIDVIIKGKKATVVNAVLTYKPSACYCCGVKNEGQIHKHGKRVSRITLLKTQGYNTYLN
LAKQRFKCLECNGTFTAKTSIVDESCFISRCVTQKVIEEATKVKTEIDTAEDNCISPSTVSRIRTKAANSLRIKPFNCLP
EHIAMDEFKSVKNVTGSMSFIFIDNDTHDVIDILENRTTRFLRAYFERFDLKNRQQVKTVTIDMYEPYVRLFRDLFPNAA
IIFDRFHIVQHLNRELNKYRVQVMNEYRNKKGPNYTIFKNNWKVLLMDTSKTIFSKYRWNKSFKAYKRSSDIVEFMLSKD
DILRRSYELVQGLRKDLRLCNWPKFINRLNSVSKKSVSKGVWKVVKYYRKHQRMLRNTIYYPAFNNGAIEGINNKIKLIK
RISFGYRNFNNFKARIMMIFSLYKGEKKKTTKPNNGLAA

Sequences:

>Translated_439_residues
MCNDTLELLRIKDENIKYINQEIDVIIKGKKATVVNAVLTYKPSACYCCGVKNEGQIHKHGKRVSRITLLKTQGYNTYLN
LAKQRFKCLECNGTFTAKTSIVDESCFISRCVTQKVIEEATKVKTEIDTAEDNCISPSTVSRIRTKAANSLRIKPFNCLP
EHIAMDEFKSVKNVTGSMSFIFIDNDTHDVIDILENRTTRFLRAYFERFDLKNRQQVKTVTIDMYEPYVRLFRDLFPNAA
IIFDRFHIVQHLNRELNKYRVQVMNEYRNKKGPNYTIFKNNWKVLLMDTSKTIFSKYRWNKSFKAYKRSSDIVEFMLSKD
DILRRSYELVQGLRKDLRLCNWPKFINRLNSVSKKSVSKGVWKVVKYYRKHQRMLRNTIYYPAFNNGAIEGINNKIKLIK
RISFGYRNFNNFKARIMMIFSLYKGEKKKTTKPNNGLAA
>Mature_439_residues
MCNDTLELLRIKDENIKYINQEIDVIIKGKKATVVNAVLTYKPSACYCCGVKNEGQIHKHGKRVSRITLLKTQGYNTYLN
LAKQRFKCLECNGTFTAKTSIVDESCFISRCVTQKVIEEATKVKTEIDTAEDNCISPSTVSRIRTKAANSLRIKPFNCLP
EHIAMDEFKSVKNVTGSMSFIFIDNDTHDVIDILENRTTRFLRAYFERFDLKNRQQVKTVTIDMYEPYVRLFRDLFPNAA
IIFDRFHIVQHLNRELNKYRVQVMNEYRNKKGPNYTIFKNNWKVLLMDTSKTIFSKYRWNKSFKAYKRSSDIVEFMLSKD
DILRRSYELVQGLRKDLRLCNWPKFINRLNSVSKKSVSKGVWKVVKYYRKHQRMLRNTIYYPAFNNGAIEGINNKIKLIK
RISFGYRNFNNFKARIMMIFSLYKGEKKKTTKPNNGLAA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 51572; Mature: 51572

Theoretical pI: Translated: 10.44; Mature: 10.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MCNDTLELLRIKDENIKYINQEIDVIIKGKKATVVNAVLTYKPSACYCCGVKNEGQIHKH
CCCCHHHHHEECCCCHHHHCCEEEEEEECCCCEEEEHEEEECCCCEEEECCCCCCCHHHC
GKRVSRITLLKTQGYNTYLNLAKQRFKCLECNGTFTAKTSIVDESCFISRCVTQKVIEEA
CCHHEEEEEEEECCCHHHHHHHHHHHEEEECCCCEEEEHHHHHHHHHHHHHHHHHHHHHH
TKVKTEIDTAEDNCISPSTVSRIRTKAANSLRIKPFNCLPEHIAMDEFKSVKNVTGSMSF
HHHHHHCCCCCCCCCCHHHHHHHHHHCCCCEEECCCCCCHHHHHHHHHHHHHHCCCCEEE
IFIDNDTHDVIDILENRTTRFLRAYFERFDLKNRQQVKTVTIDMYEPYVRLFRDLFPNAA
EEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEHHHHHHHHHHHHCCCCE
IIFDRFHIVQHLNRELNKYRVQVMNEYRNKKGPNYTIFKNNWKVLLMDTSKTIFSKYRWN
EHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCEEEEEECCHHHHHHHHCC
KSFKAYKRSSDIVEFMLSKDDILRRSYELVQGLRKDLRLCNWPKFINRLNSVSKKSVSKG
CHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
VWKVVKYYRKHQRMLRNTIYYPAFNNGAIEGINNKIKLIKRISFGYRNFNNFKARIMMIF
HHHHHHHHHHHHHHHHHCEECCCCCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHH
SLYKGEKKKTTKPNNGLAA
HHHCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MCNDTLELLRIKDENIKYINQEIDVIIKGKKATVVNAVLTYKPSACYCCGVKNEGQIHKH
CCCCHHHHHEECCCCHHHHCCEEEEEEECCCCEEEEHEEEECCCCEEEECCCCCCCHHHC
GKRVSRITLLKTQGYNTYLNLAKQRFKCLECNGTFTAKTSIVDESCFISRCVTQKVIEEA
CCHHEEEEEEEECCCHHHHHHHHHHHEEEECCCCEEEEHHHHHHHHHHHHHHHHHHHHHH
TKVKTEIDTAEDNCISPSTVSRIRTKAANSLRIKPFNCLPEHIAMDEFKSVKNVTGSMSF
HHHHHHCCCCCCCCCCHHHHHHHHHHCCCCEEECCCCCCHHHHHHHHHHHHHHCCCCEEE
IFIDNDTHDVIDILENRTTRFLRAYFERFDLKNRQQVKTVTIDMYEPYVRLFRDLFPNAA
EEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEHHHHHHHHHHHHCCCCE
IIFDRFHIVQHLNRELNKYRVQVMNEYRNKKGPNYTIFKNNWKVLLMDTSKTIFSKYRWN
EHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCEEEEEECCHHHHHHHHCC
KSFKAYKRSSDIVEFMLSKDDILRRSYELVQGLRKDLRLCNWPKFINRLNSVSKKSVSKG
CHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
VWKVVKYYRKHQRMLRNTIYYPAFNNGAIEGINNKIKLIKRISFGYRNFNNFKARIMMIF
HHHHHHHHHHHHHHHHHCEECCCCCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHH
SLYKGEKKKTTKPNNGLAA
HHHCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA