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The map label for this gene is appB [H]

Identifier: 148267427

GI number: 148267427

Start: 1046794

End: 1047756

Strand: Direct

Name: appB [H]

Synonym: SaurJH9_0993

Alternate gene names: 148267427

Gene position: 1046794-1047756 (Clockwise)

Preceding gene: 148267426

Following gene: 148267428

Centisome position: 36.01

GC content: 28.14

Gene sequence:

>963_bases
ATGCTTAAATTAATACTTAAAAGGTTAGGGTTAATGATCCCGTTACTAATTTTAATCTCAATAGTTGTATTTTCATTAGC
AATCATACAACCAGGAGATCCATTTTCAGATTTACAAAACGGTAAAATAAAACAAGAAGCAATAAATGCACAAAGGGAAA
AGTTAGGCCTCAACGACTCAATACCACATCAATATATTAGATGGGTCAATCATGTTATACATGGTGATTTAGGGGAGTCA
ATCAAATATAAGAGGCCGGTAATTGATGTTATTGAGGAAAGAATTCCAAATACAATATTACTCGGTGCTATGTCATTAAT
TATTACTTATATTATCTCATTTGCTTTAGGAATAACGTCAGGTAGATATTCTTACAGTTTGACTGATTATACTGTGCAAA
TATTTAATTATTTGATGTTAGCTATTCCATCTTTTATTGCGGGAGTATTTGCAATTTTTATTTTTTCTTTTGAATTACAA
TGGTTTCCGTTTCAAGGTTCTGTTGATATTAACCTTAAAGAAGGTACTTTTGAATATTATATGAGTAAAATTTATCATAC
ATTTTTGCCTGCATTAACTTTAGGATTATTATCTACTGCTGGTTATATTCAATATTTACGTAATGATATTATTGAAAATT
CTAAAAAAGATTATGTATTGACGGCAAGGTCAAAAGGATTATCTATGAATAAAATTTATAATAAACATATATTGAGAAAT
TCTTTAATACCTATTATTACATTTTTAGGTGCTGATATTGTAAGTATTTTAGGTGGAGCTGTGATTACTGAGACTATCTT
TTCATATAACGGTATCGGTAAATTATTTTTAGAATCGGTAATAGGTCAAGACTATCCATTAATGATGGCATTAACGTTAT
TTTTCTCATTTTTAGGTTTATTGGGTAATTTGATTTCTGATATTACTTATGGATTTATAGATCCAAGAATTAGAAGTAAC
TAG

Upstream 100 bases:

>100_bases
ATTGCAAAAGATAAATGTAAAGAAAATATACCACAATTAAAGGACATTGGTAACGAACATCAAGTTGCTTGTTTCTACGT
AGATAAAGTAGGTGATTTAA

Downstream 100 bases:

>100_bases
GGGGGATTGGAATGCAAAATAAGTCAAAATCGCCTTTTAAAATTGCATTGTCTAGATTTATTCATAATAAAATTGCAATG
TTATCGATTATTTTTTTATT

Product: binding-protein-dependent transport systems inner membrane component

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 320; Mature: 320

Protein sequence:

>320_residues
MLKLILKRLGLMIPLLILISIVVFSLAIIQPGDPFSDLQNGKIKQEAINAQREKLGLNDSIPHQYIRWVNHVIHGDLGES
IKYKRPVIDVIEERIPNTILLGAMSLIITYIISFALGITSGRYSYSLTDYTVQIFNYLMLAIPSFIAGVFAIFIFSFELQ
WFPFQGSVDINLKEGTFEYYMSKIYHTFLPALTLGLLSTAGYIQYLRNDIIENSKKDYVLTARSKGLSMNKIYNKHILRN
SLIPIITFLGADIVSILGGAVITETIFSYNGIGKLFLESVIGQDYPLMMALTLFFSFLGLLGNLISDITYGFIDPRIRSN

Sequences:

>Translated_320_residues
MLKLILKRLGLMIPLLILISIVVFSLAIIQPGDPFSDLQNGKIKQEAINAQREKLGLNDSIPHQYIRWVNHVIHGDLGES
IKYKRPVIDVIEERIPNTILLGAMSLIITYIISFALGITSGRYSYSLTDYTVQIFNYLMLAIPSFIAGVFAIFIFSFELQ
WFPFQGSVDINLKEGTFEYYMSKIYHTFLPALTLGLLSTAGYIQYLRNDIIENSKKDYVLTARSKGLSMNKIYNKHILRN
SLIPIITFLGADIVSILGGAVITETIFSYNGIGKLFLESVIGQDYPLMMALTLFFSFLGLLGNLISDITYGFIDPRIRSN
>Mature_320_residues
MLKLILKRLGLMIPLLILISIVVFSLAIIQPGDPFSDLQNGKIKQEAINAQREKLGLNDSIPHQYIRWVNHVIHGDLGES
IKYKRPVIDVIEERIPNTILLGAMSLIITYIISFALGITSGRYSYSLTDYTVQIFNYLMLAIPSFIAGVFAIFIFSFELQ
WFPFQGSVDINLKEGTFEYYMSKIYHTFLPALTLGLLSTAGYIQYLRNDIIENSKKDYVLTARSKGLSMNKIYNKHILRN
SLIPIITFLGADIVSILGGAVITETIFSYNGIGKLFLESVIGQDYPLMMALTLFFSFLGLLGNLISDITYGFIDPRIRSN

Specific function: This protein is a component of an oligopeptide permease, a binding protein-dependent transport system. This APP system can completely substitute for the OPP system in both sporulation and genetic competence, though, unlike OPP, is incapable of transportin

COG id: COG0601

COG function: function code EP; ABC-type dipeptide/oligopeptide/nickel transport systems, permease components

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787053, Length=318, Percent_Identity=32.3899371069182, Blast_Score=185, Evalue=4e-48,
Organism=Escherichia coli, GI1789888, Length=323, Percent_Identity=30.6501547987616, Blast_Score=176, Evalue=2e-45,
Organism=Escherichia coli, GI1789965, Length=338, Percent_Identity=30.4733727810651, Blast_Score=174, Evalue=9e-45,
Organism=Escherichia coli, GI1787497, Length=319, Percent_Identity=31.6614420062696, Blast_Score=167, Evalue=8e-43,
Organism=Escherichia coli, GI1787761, Length=314, Percent_Identity=32.1656050955414, Blast_Score=147, Evalue=7e-37,
Organism=Escherichia coli, GI1788504, Length=289, Percent_Identity=31.1418685121107, Blast_Score=142, Evalue=3e-35,
Organism=Escherichia coli, GI1787550, Length=273, Percent_Identity=28.2051282051282, Blast_Score=119, Evalue=2e-28,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 36090; Mature: 36090

Theoretical pI: Translated: 8.95; Mature: 8.95

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKLILKRLGLMIPLLILISIVVFSLAIIQPGDPFSDLQNGKIKQEAINAQREKLGLNDS
CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCHHHHHHHHHHHHCCCCCC
IPHQYIRWVNHVIHGDLGESIKYKRPVIDVIEERIPNTILLGAMSLIITYIISFALGITS
CHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCC
GRYSYSLTDYTVQIFNYLMLAIPSFIAGVFAIFIFSFELQWFPFQGSVDINLKEGTFEYY
CCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCEEEEECCCHHHHH
MSKIYHTFLPALTLGLLSTAGYIQYLRNDIIENSKKDYVLTARSKGLSMNKIYNKHILRN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHH
SLIPIITFLGADIVSILGGAVITETIFSYNGIGKLFLESVIGQDYPLMMALTLFFSFLGL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
LGNLISDITYGFIDPRIRSN
HHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MLKLILKRLGLMIPLLILISIVVFSLAIIQPGDPFSDLQNGKIKQEAINAQREKLGLNDS
CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCHHHHHHHHHHHHCCCCCC
IPHQYIRWVNHVIHGDLGESIKYKRPVIDVIEERIPNTILLGAMSLIITYIISFALGITS
CHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCC
GRYSYSLTDYTVQIFNYLMLAIPSFIAGVFAIFIFSFELQWFPFQGSVDINLKEGTFEYY
CCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCEEEEECCCHHHHH
MSKIYHTFLPALTLGLLSTAGYIQYLRNDIIENSKKDYVLTARSKGLSMNKIYNKHILRN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHH
SLIPIITFLGADIVSILGGAVITETIFSYNGIGKLFLESVIGQDYPLMMALTLFFSFLGL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
LGNLISDITYGFIDPRIRSN
HHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7997159; 9384377 [H]