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The map label for this gene is ycgM [C]

Identifier: 148267402

GI number: 148267402

Start: 1018812

End: 1019714

Strand: Direct

Name: ycgM [C]

Synonym: SaurJH9_0968

Alternate gene names: 148267402

Gene position: 1018812-1019714 (Clockwise)

Preceding gene: 148267401

Following gene: 148267403

Centisome position: 35.05

GC content: 32.89

Gene sequence:

>903_bases
ATGAAATTCTTATCATTCAAGTATAATGACAAAACTTCATATGGCGTTAAAGTAAAACGCGAAGATGCTGTATGGGATTT
AACACAAGTATTTGCTGACTTTGCAGAAGGAGATTTCCATCCTAAAACATTGTTAGCTGGTTTACAACAAAATCATACTT
TAGATTTTCAAGAACAAGTACGTAAAGCAGTTGTAGCAGCAGAAGATAGCGGCAAAGCTGAAGACTATAAAATTTCATTT
AATGACATTGAATTCTTACCACCAGTAACACCTCCGAATAATGTGATTGCTTTTGGTAGAAATTACAAAGATCATGCGAA
CGAATTAAATCATGAAGTAGAAAAATTATATGTATTTACAAAAGCAGCGTCATCTTTAACAGGAGATAATGCAACAATTC
CAAATCATAAAGATATTACTGATCAATTAGATTATGAAGGTGAATTAGGTATTGTTATTGGTAAGTCTGGTGAAAAGATT
CCAAAAGCATTAGCTTTAGATTATGTTTACGGCTATACAATTATTAACGATATCACTGATCGCAAAGCACAAAGTGAACA
AGATCAAGCATTTTTATCAAAAAGTTTAACTGGCGGTTGCCCAATGGGTCCTTATATCGTTACTAAAGACGAACTACCAT
TACCTGAAAATGTAAATATTGTTACAAAAGTTAACAATGAAATTAGACAAGATGGTAACACTGGCGAAATGATTCTTAAA
ATTGATGAATTAATAGAAGAAATTTCAAAATATGTTGCACTACATCCGGGAGATATTATTGCAACTGGTACACCAGCAGG
CGTTGGTGCAGGTATGCAACCACCTAAATTTTTACAACCAGGTGATGAAGTTAAAGTGACTATTGATAATATTGGAACGC
TGACAACTTATATCGCTAAATAA

Upstream 100 bases:

>100_bases
ACACAACTCATTTTCAAAATTGTCTTACTTATTTATTTGTTATTTGATAACGAAAAAAGTTATAATGTGAATTAAGATAA
AGATGAGGAGTTGAGAATGA

Downstream 100 bases:

>100_bases
TTATCATTTAAAAAGCTAACCAGTCTTTATATAGATTGGTTAGTTTTTTCTTGCTTTTCTAAAAAGGTGTTAAAGATAAA
TTATTTATAATGTTACCATT

Product: 5-carboxymethyl-2-hydroxymuconate Delta-isomerase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 300; Mature: 300

Protein sequence:

>300_residues
MKFLSFKYNDKTSYGVKVKREDAVWDLTQVFADFAEGDFHPKTLLAGLQQNHTLDFQEQVRKAVVAAEDSGKAEDYKISF
NDIEFLPPVTPPNNVIAFGRNYKDHANELNHEVEKLYVFTKAASSLTGDNATIPNHKDITDQLDYEGELGIVIGKSGEKI
PKALALDYVYGYTIINDITDRKAQSEQDQAFLSKSLTGGCPMGPYIVTKDELPLPENVNIVTKVNNEIRQDGNTGEMILK
IDELIEEISKYVALHPGDIIATGTPAGVGAGMQPPKFLQPGDEVKVTIDNIGTLTTYIAK

Sequences:

>Translated_300_residues
MKFLSFKYNDKTSYGVKVKREDAVWDLTQVFADFAEGDFHPKTLLAGLQQNHTLDFQEQVRKAVVAAEDSGKAEDYKISF
NDIEFLPPVTPPNNVIAFGRNYKDHANELNHEVEKLYVFTKAASSLTGDNATIPNHKDITDQLDYEGELGIVIGKSGEKI
PKALALDYVYGYTIINDITDRKAQSEQDQAFLSKSLTGGCPMGPYIVTKDELPLPENVNIVTKVNNEIRQDGNTGEMILK
IDELIEEISKYVALHPGDIIATGTPAGVGAGMQPPKFLQPGDEVKVTIDNIGTLTTYIAK
>Mature_300_residues
MKFLSFKYNDKTSYGVKVKREDAVWDLTQVFADFAEGDFHPKTLLAGLQQNHTLDFQEQVRKAVVAAEDSGKAEDYKISF
NDIEFLPPVTPPNNVIAFGRNYKDHANELNHEVEKLYVFTKAASSLTGDNATIPNHKDITDQLDYEGELGIVIGKSGEKI
PKALALDYVYGYTIINDITDRKAQSEQDQAFLSKSLTGGCPMGPYIVTKDELPLPENVNIVTKVNNEIRQDGNTGEMILK
IDELIEEISKYVALHPGDIIATGTPAGVGAGMQPPKFLQPGDEVKVTIDNIGTLTTYIAK

Specific function: Unknown

COG id: COG0179

COG function: function code Q; 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the FAH family

Homologues:

Organism=Homo sapiens, GI156231349, Length=244, Percent_Identity=38.5245901639344, Blast_Score=178, Evalue=6e-45,
Organism=Homo sapiens, GI40786394, Length=244, Percent_Identity=37.7049180327869, Blast_Score=176, Evalue=2e-44,
Organism=Homo sapiens, GI13654274, Length=215, Percent_Identity=35.3488372093023, Blast_Score=129, Evalue=3e-30,
Organism=Homo sapiens, GI215422413, Length=184, Percent_Identity=38.5869565217391, Blast_Score=127, Evalue=1e-29,
Organism=Homo sapiens, GI66348062, Length=184, Percent_Identity=38.5869565217391, Blast_Score=127, Evalue=1e-29,
Organism=Escherichia coli, GI1787428, Length=213, Percent_Identity=31.4553990610329, Blast_Score=94, Evalue=8e-21,
Organism=Caenorhabditis elegans, GI17557057, Length=181, Percent_Identity=38.121546961326, Blast_Score=117, Evalue=8e-27,
Organism=Saccharomyces cerevisiae, GI6324161, Length=237, Percent_Identity=28.2700421940928, Blast_Score=77, Evalue=3e-15,
Organism=Drosophila melanogaster, GI28572127, Length=222, Percent_Identity=40.990990990991, Blast_Score=172, Evalue=3e-43,
Organism=Drosophila melanogaster, GI24663695, Length=250, Percent_Identity=36.4, Blast_Score=147, Evalue=8e-36,
Organism=Drosophila melanogaster, GI28571789, Length=206, Percent_Identity=30.5825242718447, Blast_Score=85, Evalue=7e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y829_STAAN (Q7A6H3)

Other databases:

- EMBL:   BA000018
- PIR:   A89864
- RefSeq:   NP_374090.1
- HSSP:   P37352
- ProteinModelPortal:   Q7A6H3
- SMR:   Q7A6H3
- STRING:   Q7A6H3
- SWISS-2DPAGE:   Q7A6H3
- EnsemblBacteria:   EBSTAT00000000577
- GeneID:   1123644
- GenomeReviews:   BA000018_GR
- KEGG:   sau:SA0829
- eggNOG:   COG0179
- GeneTree:   EBGT00050000025057
- HOGENOM:   HBG729228
- OMA:   WIVSKGQ
- ProtClustDB:   CLSK885036
- BioCyc:   SAUR158879:SA0829-MONOMER
- InterPro:   IPR002529
- InterPro:   IPR011234
- Gene3D:   G3DSA:3.90.850.10

Pfam domain/function: PF01557 FAA_hydrolase; SSF56529 Fumarylacetoacetase_C-rel

EC number: NA

Molecular weight: Translated: 33114; Mature: 33114

Theoretical pI: Translated: 4.60; Mature: 4.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKFLSFKYNDKTSYGVKVKREDAVWDLTQVFADFAEGDFHPKTLLAGLQQNHTLDFQEQV
CCEEEEEECCCCCCCEEEECCCHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCHHHHH
RKAVVAAEDSGKAEDYKISFNDIEFLPPVTPPNNVIAFGRNYKDHANELNHEVEKLYVFT
HHHHHHCCCCCCCCEEEEEECCEEECCCCCCCCCEEEECCCCHHHHHHHHHHHHHHEEEE
KAASSLTGDNATIPNHKDITDQLDYEGELGIVIGKSGEKIPKALALDYVYGYTIINDITD
HHHHHCCCCCCCCCCCCCCHHHCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHH
RKAQSEQDQAFLSKSLTGGCPMGPYIVTKDELPLPENVNIVTKVNNEIRQDGNTGEMILK
HHHCCHHHHHHHHHHCCCCCCCCCEEEECCCCCCCCCCEEEEECCHHHHCCCCCCCEEEE
IDELIEEISKYVALHPGDIIATGTPAGVGAGMQPPKFLQPGDEVKVTIDNIGTLTTYIAK
HHHHHHHHHHHHEECCCCEEECCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCHHHHCC
>Mature Secondary Structure
MKFLSFKYNDKTSYGVKVKREDAVWDLTQVFADFAEGDFHPKTLLAGLQQNHTLDFQEQV
CCEEEEEECCCCCCCEEEECCCHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCHHHHH
RKAVVAAEDSGKAEDYKISFNDIEFLPPVTPPNNVIAFGRNYKDHANELNHEVEKLYVFT
HHHHHHCCCCCCCCEEEEEECCEEECCCCCCCCCEEEECCCCHHHHHHHHHHHHHHEEEE
KAASSLTGDNATIPNHKDITDQLDYEGELGIVIGKSGEKIPKALALDYVYGYTIINDITD
HHHHHCCCCCCCCCCCCCCHHHCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHH
RKAQSEQDQAFLSKSLTGGCPMGPYIVTKDELPLPENVNIVTKVNNEIRQDGNTGEMILK
HHHCCHHHHHHHHHHCCCCCCCCCEEEECCCCCCCCCCEEEEECCHHHHCCCCCCCEEEE
IDELIEEISKYVALHPGDIIATGTPAGVGAGMQPPKFLQPGDEVKVTIDNIGTLTTYIAK
HHHHHHHHHHHHEECCCCEEECCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11418146