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The map label for this gene is nagD

Identifier: 148267362

GI number: 148267362

Start: 975045

End: 975824

Strand: Direct

Name: nagD

Synonym: SaurJH9_0928

Alternate gene names: 148267362

Gene position: 975045-975824 (Clockwise)

Preceding gene: 148267361

Following gene: 148267363

Centisome position: 33.54

GC content: 34.87

Gene sequence:

>780_bases
ATGAAACAGTATAAAGCGTATTTAATCGATTTAGATGGCACAATGTATATGGGAACAGATGAGATTGATGGAGCAAAACA
ATTCATCGATTATTTAAATGTAAAAGGCATTCCTCATTTATACGTAACTAATAATTCAACAAAAACACCTGAGCAAGTAA
CTGAAAAATTACGTGAAATGCACATTGATGCTAAACCAGAAGAGGTTGTAACGTCAGCGTTAGCCACTGCTGATTATATT
TCAGAACAATCACCAGGAGCATCAGTATATATGTTAGGTGGGAGTGGTTTAAATACTGCGTTAACCGAAGCGGGACTTGT
CATTAAAAATGACGAGCATGTTGATTATGTAGTTATTGGACTTGACGAACAAGTTACATATGAAAAGCTTGCGATTGCAA
CGTTAGGTGTAAGAAATGGTGCAACATTTATTTCTACAAATCCTGATGTATCAATTCCTAAAGAGCGTGGTTTATTACCT
GGTAATGGTGCTATTACAAGTGTTGTAAGTGTATCGACAGGTGTATCGCCACAATTTATTGGTAAACCAGAACCGATTAT
TATGGTTAAAGCATTAGAAATTTTAGGATTAGATAAATCCGAAGTTGCTATGGTAGGCGATTTGTACGATACCGATATTA
TGTCTGGTATTAACGTAGGTATGGATACGATTCATGTACAAACAGGTGTATCTACGTTAGAAGATGTGCAAAATAAAAAT
GTGCCACCAACGTATTCTTTTAAAGATTTAAATGAAGCAATAGCTGAATTAGAAAAATAG

Upstream 100 bases:

>100_bases
ACGCATTACCTTATTACAAACAATTTATTACAGAAGTAACGATATTTTTACATCAAGAAAATGTACCAGTAACAGCTTTT
GGTAAAGGAGAAAATCAATA

Downstream 100 bases:

>100_bases
ATATAGTCATTTTATAAAGTAGGTGAATTGATTTGGTAAAAATAGTTGTTTCGAGGAAAATTCCAGATAAATTTTATCAA
CAATTAAGTAAACTTGGTGA

Product: HAD family hydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 259; Mature: 259

Protein sequence:

>259_residues
MKQYKAYLIDLDGTMYMGTDEIDGAKQFIDYLNVKGIPHLYVTNNSTKTPEQVTEKLREMHIDAKPEEVVTSALATADYI
SEQSPGASVYMLGGSGLNTALTEAGLVIKNDEHVDYVVIGLDEQVTYEKLAIATLGVRNGATFISTNPDVSIPKERGLLP
GNGAITSVVSVSTGVSPQFIGKPEPIIMVKALEILGLDKSEVAMVGDLYDTDIMSGINVGMDTIHVQTGVSTLEDVQNKN
VPPTYSFKDLNEAIAELEK

Sequences:

>Translated_259_residues
MKQYKAYLIDLDGTMYMGTDEIDGAKQFIDYLNVKGIPHLYVTNNSTKTPEQVTEKLREMHIDAKPEEVVTSALATADYI
SEQSPGASVYMLGGSGLNTALTEAGLVIKNDEHVDYVVIGLDEQVTYEKLAIATLGVRNGATFISTNPDVSIPKERGLLP
GNGAITSVVSVSTGVSPQFIGKPEPIIMVKALEILGLDKSEVAMVGDLYDTDIMSGINVGMDTIHVQTGVSTLEDVQNKN
VPPTYSFKDLNEAIAELEK
>Mature_259_residues
MKQYKAYLIDLDGTMYMGTDEIDGAKQFIDYLNVKGIPHLYVTNNSTKTPEQVTEKLREMHIDAKPEEVVTSALATADYI
SEQSPGASVYMLGGSGLNTALTEAGLVIKNDEHVDYVVIGLDEQVTYEKLAIATLGVRNGATFISTNPDVSIPKERGLLP
GNGAITSVVSVSTGVSPQFIGKPEPIIMVKALEILGLDKSEVAMVGDLYDTDIMSGINVGMDTIHVQTGVSTLEDVQNKN
VPPTYSFKDLNEAIAELEK

Specific function: Unknown

COG id: COG0647

COG function: function code G; Predicted sugar phosphatases of the HAD superfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the HAD-like hydrolase superfamily. NagD family

Homologues:

Organism=Homo sapiens, GI10092677, Length=279, Percent_Identity=28.673835125448, Blast_Score=123, Evalue=2e-28,
Organism=Homo sapiens, GI108796653, Length=260, Percent_Identity=30, Blast_Score=108, Evalue=6e-24,
Organism=Homo sapiens, GI14149777, Length=255, Percent_Identity=25.8823529411765, Blast_Score=84, Evalue=1e-16,
Organism=Escherichia coli, GI1786890, Length=248, Percent_Identity=31.4516129032258, Blast_Score=135, Evalue=3e-33,
Organism=Caenorhabditis elegans, GI193210059, Length=269, Percent_Identity=28.2527881040892, Blast_Score=95, Evalue=3e-20,
Organism=Caenorhabditis elegans, GI17562458, Length=265, Percent_Identity=26.0377358490566, Blast_Score=91, Evalue=5e-19,
Organism=Caenorhabditis elegans, GI17558880, Length=265, Percent_Identity=26.0377358490566, Blast_Score=91, Evalue=6e-19,
Organism=Caenorhabditis elegans, GI17560956, Length=265, Percent_Identity=26.0377358490566, Blast_Score=91, Evalue=7e-19,
Organism=Caenorhabditis elegans, GI86563050, Length=247, Percent_Identity=27.9352226720648, Blast_Score=82, Evalue=2e-16,
Organism=Caenorhabditis elegans, GI71984613, Length=271, Percent_Identity=27.3062730627306, Blast_Score=82, Evalue=3e-16,
Organism=Saccharomyces cerevisiae, GI6319965, Length=240, Percent_Identity=28.75, Blast_Score=110, Evalue=3e-25,
Organism=Drosophila melanogaster, GI24666141, Length=256, Percent_Identity=26.171875, Blast_Score=110, Evalue=1e-24,
Organism=Drosophila melanogaster, GI24656326, Length=264, Percent_Identity=24.6212121212121, Blast_Score=95, Evalue=4e-20,
Organism=Drosophila melanogaster, GI24656330, Length=270, Percent_Identity=22.962962962963, Blast_Score=74, Evalue=7e-14,
Organism=Drosophila melanogaster, GI24641437, Length=249, Percent_Identity=27.710843373494, Blast_Score=71, Evalue=7e-13,
Organism=Drosophila melanogaster, GI19920940, Length=253, Percent_Identity=27.2727272727273, Blast_Score=70, Evalue=1e-12,
Organism=Drosophila melanogaster, GI18859765, Length=281, Percent_Identity=24.1992882562278, Blast_Score=68, Evalue=5e-12,
Organism=Drosophila melanogaster, GI22026920, Length=246, Percent_Identity=21.1382113821138, Blast_Score=67, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NAGD_STAA3 (Q2FIE5)

Other databases:

- EMBL:   CP000255
- RefSeq:   YP_493533.1
- HSSP:   O59622
- ProteinModelPortal:   Q2FIE5
- SMR:   Q2FIE5
- STRING:   Q2FIE5
- EnsemblBacteria:   EBSTAT00000037323
- GeneID:   3913243
- GenomeReviews:   CP000255_GR
- KEGG:   saa:SAUSA300_0833
- eggNOG:   COG0647
- GeneTree:   EBGT00050000025187
- HOGENOM:   HBG646794
- OMA:   NSIYTPR
- ProtClustDB:   CLSK2392225
- InterPro:   IPR005834
- InterPro:   IPR023214
- InterPro:   IPR006357
- InterPro:   IPR006354
- InterPro:   IPR023215
- Gene3D:   G3DSA:3.40.50.1000
- Gene3D:   G3DSA:3.40.50.10410
- TIGRFAMs:   TIGR01460
- TIGRFAMs:   TIGR01457

Pfam domain/function: PF00702 Hydrolase; SSF56784 SSF56784

EC number: NA

Molecular weight: Translated: 27946; Mature: 27946

Theoretical pI: Translated: 4.23; Mature: 4.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKQYKAYLIDLDGTMYMGTDEIDGAKQFIDYLNVKGIPHLYVTNNSTKTPEQVTEKLREM
CCCCEEEEEECCCEEEECCCCCCHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHH
HIDAKPEEVVTSALATADYISEQSPGASVYMLGGSGLNTALTEAGLVIKNDEHVDYVVIG
CCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHCCEEEECCCCEEEEEEE
LDEQVTYEKLAIATLGVRNGATFISTNPDVSIPKERGLLPGNGAITSVVSVSTGVSPQFI
CCCCCCHHHHEEEEEECCCCCEEEECCCCCCCCHHCCCCCCCCCCEEEEECCCCCCCCCC
GKPEPIIMVKALEILGLDKSEVAMVGDLYDTDIMSGINVGMDTIHVQTGVSTLEDVQNKN
CCCCCEEEEEEHHHHCCCHHHEEEECCHHHHHHHHCCCCCCEEEEEECCHHHHHHHHCCC
VPPTYSFKDLNEAIAELEK
CCCCCCHHHHHHHHHHHCC
>Mature Secondary Structure
MKQYKAYLIDLDGTMYMGTDEIDGAKQFIDYLNVKGIPHLYVTNNSTKTPEQVTEKLREM
CCCCEEEEEECCCEEEECCCCCCHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHH
HIDAKPEEVVTSALATADYISEQSPGASVYMLGGSGLNTALTEAGLVIKNDEHVDYVVIG
CCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHCCEEEECCCCEEEEEEE
LDEQVTYEKLAIATLGVRNGATFISTNPDVSIPKERGLLPGNGAITSVVSVSTGVSPQFI
CCCCCCHHHHEEEEEECCCCCEEEECCCCCCCCHHCCCCCCCCCCEEEEECCCCCCCCCC
GKPEPIIMVKALEILGLDKSEVAMVGDLYDTDIMSGINVGMDTIHVQTGVSTLEDVQNKN
CCCCCEEEEEEHHHHCCCHHHEEEECCHHHHHHHHCCCCCCEEEEEECCHHHHHHHHCCC
VPPTYSFKDLNEAIAELEK
CCCCCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA