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The map label for this gene is lytN [H]

Identifier: 148267347

GI number: 148267347

Start: 961161

End: 962573

Strand: Direct

Name: lytN [H]

Synonym: SaurJH9_0913

Alternate gene names: 148267347

Gene position: 961161-962573 (Clockwise)

Preceding gene: 148267346

Following gene: 148267349

Centisome position: 33.07

GC content: 39.28

Gene sequence:

>1413_bases
ATGCCGTCGGTTAGGACATACAGTCAAGCTATTAGTTATCTTAAAAGTTTAGAGGGTAAGGCGTGGAATCCAGACAATGC
ATTTGGATGTCAATGCTTCGATACTGCTAACCAATATTGGCTTTACTTATTTAATCACAGGTTGAAAGGTGTGGGCGCTG
CAGACATTCCAACATGGAATGATTTCACTAACGAGGCAACCGTTTACGAAAATACTGTGTCGTTTCAAGCATTGCCTGGC
GACGTCGTTATTTTTAACCGTAATTATGGTGGTGGTTATGGTCATGTAGGTATTGTAATAAGCGCTACGTTAGATTCTAT
AACTATTTTAGAGCAGAACTGGCTAGGCGGTGCTTACTGGAGTCCACCAGAAGTTACTACAAGACGCACACACGGCTACG
ACTTCCCTATGTGGTTTATCCGTCCATTCTACGCAAAAGAAACGACCGCTAATAAGCTAAGAAGCGCAGTGAAGCCAGTT
AAACAAGATAAGTTATCAAAAGGTAAAAAAATCATGCTTGTGGCTGGTCATGGTATTGGTGCATACTCTAACGACCCAGG
TGCCGTTGCGAATGGAGAAAACGAAAGAGATTTTAACCGTAAAAATATTATACCTAGAGTGAAAAAGTATCTTGAGTCAG
TAGGCAACACAGTATTGTTATACGGTGGCAACTCGATGAATCAAGATTTATATCAAGATACATTGTACGGTCAACGTGTT
GGAAACTATAAAGATTATGGCATGTACTGGATTAAAAGTGAAGTCAAACCGGATGCAATCATAGAGTTTCATTTAGATTC
TGCTAGCCCACAAGCAAGTGGCGGGCATGTAATCATTAGCGATCGTTTCCCAGCTGATGACATTGACAAGGCATTAAGTA
GTGCATTAGATAAAACAGTGGGTAAAATAAGAGGTGTGACACCTAGAGGGGATTTATTGAACGCTAACGTGTCTGCTGAT
CTTAATCTTAATTATCGTTTAATCGAATTAGGTTTTATCACATCTACGAAAGATTTAAACTACATTAAAAACAATTTAGA
CAGCTTCACGAAGCGGATTGCTGAAGCCATTAACGGCAGACAAATTGATGCGCCAAGTAGTAAGCCAAGCGCTGACAAAA
TAACATGGAATTGGAAAGGCGTATTTTATCCTAATCCAGAAAAAGCTATAAGAGTCAGAAAAACAGCTGGATTAACCGGC
ACAGTCGTTGAAGAAGATTCATGGCTATACACAAAAGATGATTGGGTAAAATTCGACCAAGTCATTAAAAAAGATGGCTA
CTGGTGGATTAGATTCAAATATCAACGTGAGGGCTCTAGTACTAACAATTTCTATTGTGCAGTGTGTAGAATTACTGATA
AGGAACAAAAGATTAAAAATGAAAAATATTGGGGCACGATTGAGTGGGCTTAA

Upstream 100 bases:

>100_bases
TTTACTCACGCATCTAAGAAAGGGCAACAAAAAATTTATGAAGTAAAAGCTGGCATTCAGTCAACTGGTGGCGCACCTAA
AGTGAACGGAGATGATAACA

Downstream 100 bases:

>100_bases
TAGGTTGTACCTATAAAAAGAAAAGAGGTAGGTTATTTTCTTCCTACCTCTAAAAATGATTATCTTTCTATTGTTATATG
AGTTATATCTTTAGGACTAA

Product: CHAP domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 470; Mature: 469

Protein sequence:

>470_residues
MPSVRTYSQAISYLKSLEGKAWNPDNAFGCQCFDTANQYWLYLFNHRLKGVGAADIPTWNDFTNEATVYENTVSFQALPG
DVVIFNRNYGGGYGHVGIVISATLDSITILEQNWLGGAYWSPPEVTTRRTHGYDFPMWFIRPFYAKETTANKLRSAVKPV
KQDKLSKGKKIMLVAGHGIGAYSNDPGAVANGENERDFNRKNIIPRVKKYLESVGNTVLLYGGNSMNQDLYQDTLYGQRV
GNYKDYGMYWIKSEVKPDAIIEFHLDSASPQASGGHVIISDRFPADDIDKALSSALDKTVGKIRGVTPRGDLLNANVSAD
LNLNYRLIELGFITSTKDLNYIKNNLDSFTKRIAEAINGRQIDAPSSKPSADKITWNWKGVFYPNPEKAIRVRKTAGLTG
TVVEEDSWLYTKDDWVKFDQVIKKDGYWWIRFKYQREGSSTNNFYCAVCRITDKEQKIKNEKYWGTIEWA

Sequences:

>Translated_470_residues
MPSVRTYSQAISYLKSLEGKAWNPDNAFGCQCFDTANQYWLYLFNHRLKGVGAADIPTWNDFTNEATVYENTVSFQALPG
DVVIFNRNYGGGYGHVGIVISATLDSITILEQNWLGGAYWSPPEVTTRRTHGYDFPMWFIRPFYAKETTANKLRSAVKPV
KQDKLSKGKKIMLVAGHGIGAYSNDPGAVANGENERDFNRKNIIPRVKKYLESVGNTVLLYGGNSMNQDLYQDTLYGQRV
GNYKDYGMYWIKSEVKPDAIIEFHLDSASPQASGGHVIISDRFPADDIDKALSSALDKTVGKIRGVTPRGDLLNANVSAD
LNLNYRLIELGFITSTKDLNYIKNNLDSFTKRIAEAINGRQIDAPSSKPSADKITWNWKGVFYPNPEKAIRVRKTAGLTG
TVVEEDSWLYTKDDWVKFDQVIKKDGYWWIRFKYQREGSSTNNFYCAVCRITDKEQKIKNEKYWGTIEWA
>Mature_469_residues
PSVRTYSQAISYLKSLEGKAWNPDNAFGCQCFDTANQYWLYLFNHRLKGVGAADIPTWNDFTNEATVYENTVSFQALPGD
VVIFNRNYGGGYGHVGIVISATLDSITILEQNWLGGAYWSPPEVTTRRTHGYDFPMWFIRPFYAKETTANKLRSAVKPVK
QDKLSKGKKIMLVAGHGIGAYSNDPGAVANGENERDFNRKNIIPRVKKYLESVGNTVLLYGGNSMNQDLYQDTLYGQRVG
NYKDYGMYWIKSEVKPDAIIEFHLDSASPQASGGHVIISDRFPADDIDKALSSALDKTVGKIRGVTPRGDLLNANVSADL
NLNYRLIELGFITSTKDLNYIKNNLDSFTKRIAEAINGRQIDAPSSKPSADKITWNWKGVFYPNPEKAIRVRKTAGLTGT
VVEEDSWLYTKDDWVKFDQVIKKDGYWWIRFKYQREGSSTNNFYCAVCRITDKEQKIKNEKYWGTIEWA

Specific function: Probably involved in peptidoglycan hydrolysis [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Secreted (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 peptidase C51 domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007921
- InterPro:   IPR005877
- InterPro:   IPR018392
- InterPro:   IPR002482 [H]

Pfam domain/function: PF05257 CHAP; PF01476 LysM; PF04650 YSIRK_signal [H]

EC number: NA

Molecular weight: Translated: 53203; Mature: 53072

Theoretical pI: Translated: 9.10; Mature: 9.10

Prosite motif: PS50911 CHAP

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPSVRTYSQAISYLKSLEGKAWNPDNAFGCQCFDTANQYWLYLFNHRLKGVGAADIPTWN
CCCCHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCEEEEEEECHHCCCCCCCCCCCC
DFTNEATVYENTVSFQALPGDVVIFNRNYGGGYGHVGIVISATLDSITILEQNWLGGAYW
CCCCCCEEEECCEEEEECCCCEEEEECCCCCCCCEEEEEEEECCCEEEEEEECCCCCCCC
SPPEVTTRRTHGYDFPMWFIRPFYAKETTANKLRSAVKPVKQDKLSKGKKIMLVAGHGIG
CCCCCCCCCCCCCCCCHHHHEEHHHCCHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCC
AYSNDPGAVANGENERDFNRKNIIPRVKKYLESVGNTVLLYGGNSMNQDLYQDTLYGQRV
CCCCCCCCCCCCCCCCCCCHHHCCHHHHHHHHHHCCEEEEECCCCCCHHHHHHHHHHHHC
GNYKDYGMYWIKSEVKPDAIIEFHLDSASPQASGGHVIISDRFPADDIDKALSSALDKTV
CCCCCCCEEEEECCCCCCEEEEEEECCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHH
GKIRGVTPRGDLLNANVSADLNLNYRLIELGFITSTKDLNYIKNNLDSFTKRIAEAINGR
HHHCCCCCCCCEEECCCEEEECCCEEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCC
QIDAPSSKPSADKITWNWKGVFYPNPEKAIRVRKTAGLTGTVVEEDSWLYTKDDWVKFDQ
EECCCCCCCCCCEEEEEEEEEECCCCHHHEEEEECCCCEEEEEECCCEEEECCHHHHHHH
VIKKDGYWWIRFKYQREGSSTNNFYCAVCRITDKEQKIKNEKYWGTIEWA
HHHCCCEEEEEEEEEECCCCCCCEEEEEEEECCHHHHHCCCCCCEEEEEC
>Mature Secondary Structure 
PSVRTYSQAISYLKSLEGKAWNPDNAFGCQCFDTANQYWLYLFNHRLKGVGAADIPTWN
CCCHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCEEEEEEECHHCCCCCCCCCCCC
DFTNEATVYENTVSFQALPGDVVIFNRNYGGGYGHVGIVISATLDSITILEQNWLGGAYW
CCCCCCEEEECCEEEEECCCCEEEEECCCCCCCCEEEEEEEECCCEEEEEEECCCCCCCC
SPPEVTTRRTHGYDFPMWFIRPFYAKETTANKLRSAVKPVKQDKLSKGKKIMLVAGHGIG
CCCCCCCCCCCCCCCCHHHHEEHHHCCHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCC
AYSNDPGAVANGENERDFNRKNIIPRVKKYLESVGNTVLLYGGNSMNQDLYQDTLYGQRV
CCCCCCCCCCCCCCCCCCCHHHCCHHHHHHHHHHCCEEEEECCCCCCHHHHHHHHHHHHC
GNYKDYGMYWIKSEVKPDAIIEFHLDSASPQASGGHVIISDRFPADDIDKALSSALDKTV
CCCCCCCEEEEECCCCCCEEEEEEECCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHH
GKIRGVTPRGDLLNANVSADLNLNYRLIELGFITSTKDLNYIKNNLDSFTKRIAEAINGR
HHHCCCCCCCCEEECCCEEEECCCEEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCC
QIDAPSSKPSADKITWNWKGVFYPNPEKAIRVRKTAGLTGTVVEEDSWLYTKDDWVKFDQ
EECCCCCCCCCCEEEEEEEEEECCCCHHHEEEEECCCCEEEEEECCCEEEECCHHHHHHH
VIKKDGYWWIRFKYQREGSSTNNFYCAVCRITDKEQKIKNEKYWGTIEWA
HHHCCCEEEEEEEEEECCCCCCCEEEEEEEECCHHHHHCCCCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9931440; 10077832; 12791130 [H]