Definition | Staphylococcus aureus subsp. aureus JH9, complete genome. |
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Accession | NC_009487 |
Length | 2,906,700 |
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The map label for this gene is atl [H]
Identifier: 148267343
GI number: 148267343
Start: 957293
End: 959191
Strand: Direct
Name: atl [H]
Synonym: SaurJH9_0909
Alternate gene names: 148267343
Gene position: 957293-959191 (Clockwise)
Preceding gene: 148267342
Following gene: 148267344
Centisome position: 32.93
GC content: 36.44
Gene sequence:
>1899_bases ATGGGATTACCTAATCCGAAAAATAGAAAGCCCACAGCTAGTGAAGTGGTTGAATGGGCGTTATATATCGCTAAAAACAA AATAGCTATTGATGTACCTGGTTCTGGAATGGGAGCACAATGCTGGGATTTACCTAATTATTTACTCGATAAATATTGGG GATTTAGAACATGGGGAAATGCTGATGCTATGGCTCAGAAATCTAATTATAGAGGTAGAGATTTCAAGATAATTAGAAAT ACAAAAGACTTTGTACCACAACCAGGCGACTGGGGTGTTTGGACTGGTGGTTGGGCAGGTCATGTGAACATTGTAGTAGG GCCATGCACAAAAGACTATTGGTATGGTGTGGATCAAAACTGGTATACAAATAATGCAACAGGAAGTCCGCCGTATAAAA TCAAACACTCTTATCATGATGGACCAGGTGGAGGAGTTAAATATTTTGTTAGACCACCATATCATCCGGAGAAATCTACG CCGGCACCTAAACCAGAAGATGATAGTGATGATAACGAAAAAAATAATAAAAAAGTTCCAATTTGGAAAGATGTAACAAC TATAAAGTACACTATTTCTAGCCAAGAGGTTAATTATCCAGAATATATTTATCACTTTATAGTAGAAGGTAATCGACGAC TCGAAAAACCTAAAGGAATAATGATTAGAAACGCACAAACGATGAGCTCGGTAGAAAGTTTATATAACAGTAGGAAGAAA TACAAACAGGATGTAGAATATCCCCACTTTTATGTTGACAGACATAATATTTGGGCACCTAGAAGAGCTGTATTTGAAGT TCCTAATGAACCTGATTATATAGTTATAGACGTATGTGAAGATTATAGTGCGAGTAAAAATGAATTTATTTTTAATGAGA TTCACGCAATGGTTGTAGCTGTAGATATGATGGCCAAATATGAGATACCTCTAAGTATTGAAAATTTAAAAGTAGACGAC AGCATTTGGCGTTCGATGTTGGAACATGTTAATTGGAATATGATTGACAACGGTGTTCCCCCTAAAGATAAATACGAAGC ATTAGAAAAGGCATTACTTAATATATTTAAAAACAGAGAAAAATTATTAAATTCTATAACTAAACCAACAGTAACAAAAT CTAGAATAAAAGTTATGGTAGATAATAAAAACGCTGATATAGCGAATGTAAGAGACTCATCACCAACAGCTAATAATGGC TCGGCATCTAAACAACCGCAGATCATAACAGAAACGAGTCCTTATACATTCAAACAAGCACTGGATAAACAAATGGCAAG AGGTAACCCGAAAAAATCTAATGCTTGGGGTTGGGCTAACGCTACACGAGCACAAACGAGTTCAGCAATGAATGTTAAAC GAATATGGGAAAGTAACACGCAGTGCTACCAAATGCTTAATTTAGGCAAGTATCAAGGCGTTTCAGTTAGTTCGCTTAAT AAGATACTTAAAGGTAAGGGGACATTGAATAATCAAGGTAAAGCGTTCGCAGAAGCTTGTAAAAAGCACAACATTAATGA AATTTATTTAATCGCGCATGCTTTCTTAGAAAGTGGATATGGAACAAGTAACTTCGCTAACGGAAAAGATGGAGTATACA ACTACTTCGGTATTGGCGCTTACGACAACAATCCTAACTACGCAATGACGTTTGCTAGGAATAAAGGTTGGACATCTCCA GCAAAAGCAATCATGGGCGGTGCTAGCTTCGTAAGAAAGGATTACATCAACAAAGGACAGAATACACTGTACAGAATCAG ATGGAATCCTAAGAATCCAGCTACGCACCAATACGCTACTGCTATAGAGTGGTGCCAACATCAAGCTAGTACAATCGCTA AGCTATATAAACAAATCGGCTTAAAAGGTATCTACTTTATAAGAGATAAATATAAATAA
Upstream 100 bases:
>100_bases ATAGCTTCTGGGCGTGCTTCTGGTTTGGTAAATGTAAATAACAGTTAAGAGTCAGTGCTTCGGCACTGGCTTTTTATTTT GATTGAAATGAGGTGCATAC
Downstream 100 bases:
>100_bases AGAGGTGTATAAATGTACAAAATAAAAGATGTTGAAACGAGAATAAAAAATGATGGTGTTGACTTAGGTGACATTGGCTG TCGATTTTACACTGAAGATG
Product: mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase
Products: NA
Alternate protein names: AtlE; N-acetylmuramoyl-L-alanine amidase; Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase [H]
Number of amino acids: Translated: 632; Mature: 631
Protein sequence:
>632_residues MGLPNPKNRKPTASEVVEWALYIAKNKIAIDVPGSGMGAQCWDLPNYLLDKYWGFRTWGNADAMAQKSNYRGRDFKIIRN TKDFVPQPGDWGVWTGGWAGHVNIVVGPCTKDYWYGVDQNWYTNNATGSPPYKIKHSYHDGPGGGVKYFVRPPYHPEKST PAPKPEDDSDDNEKNNKKVPIWKDVTTIKYTISSQEVNYPEYIYHFIVEGNRRLEKPKGIMIRNAQTMSSVESLYNSRKK YKQDVEYPHFYVDRHNIWAPRRAVFEVPNEPDYIVIDVCEDYSASKNEFIFNEIHAMVVAVDMMAKYEIPLSIENLKVDD SIWRSMLEHVNWNMIDNGVPPKDKYEALEKALLNIFKNREKLLNSITKPTVTKSRIKVMVDNKNADIANVRDSSPTANNG SASKQPQIITETSPYTFKQALDKQMARGNPKKSNAWGWANATRAQTSSAMNVKRIWESNTQCYQMLNLGKYQGVSVSSLN KILKGKGTLNNQGKAFAEACKKHNINEIYLIAHAFLESGYGTSNFANGKDGVYNYFGIGAYDNNPNYAMTFARNKGWTSP AKAIMGGASFVRKDYINKGQNTLYRIRWNPKNPATHQYATAIEWCQHQASTIAKLYKQIGLKGIYFIRDKYK
Sequences:
>Translated_632_residues MGLPNPKNRKPTASEVVEWALYIAKNKIAIDVPGSGMGAQCWDLPNYLLDKYWGFRTWGNADAMAQKSNYRGRDFKIIRN TKDFVPQPGDWGVWTGGWAGHVNIVVGPCTKDYWYGVDQNWYTNNATGSPPYKIKHSYHDGPGGGVKYFVRPPYHPEKST PAPKPEDDSDDNEKNNKKVPIWKDVTTIKYTISSQEVNYPEYIYHFIVEGNRRLEKPKGIMIRNAQTMSSVESLYNSRKK YKQDVEYPHFYVDRHNIWAPRRAVFEVPNEPDYIVIDVCEDYSASKNEFIFNEIHAMVVAVDMMAKYEIPLSIENLKVDD SIWRSMLEHVNWNMIDNGVPPKDKYEALEKALLNIFKNREKLLNSITKPTVTKSRIKVMVDNKNADIANVRDSSPTANNG SASKQPQIITETSPYTFKQALDKQMARGNPKKSNAWGWANATRAQTSSAMNVKRIWESNTQCYQMLNLGKYQGVSVSSLN KILKGKGTLNNQGKAFAEACKKHNINEIYLIAHAFLESGYGTSNFANGKDGVYNYFGIGAYDNNPNYAMTFARNKGWTSP AKAIMGGASFVRKDYINKGQNTLYRIRWNPKNPATHQYATAIEWCQHQASTIAKLYKQIGLKGIYFIRDKYK >Mature_631_residues GLPNPKNRKPTASEVVEWALYIAKNKIAIDVPGSGMGAQCWDLPNYLLDKYWGFRTWGNADAMAQKSNYRGRDFKIIRNT KDFVPQPGDWGVWTGGWAGHVNIVVGPCTKDYWYGVDQNWYTNNATGSPPYKIKHSYHDGPGGGVKYFVRPPYHPEKSTP APKPEDDSDDNEKNNKKVPIWKDVTTIKYTISSQEVNYPEYIYHFIVEGNRRLEKPKGIMIRNAQTMSSVESLYNSRKKY KQDVEYPHFYVDRHNIWAPRRAVFEVPNEPDYIVIDVCEDYSASKNEFIFNEIHAMVVAVDMMAKYEIPLSIENLKVDDS IWRSMLEHVNWNMIDNGVPPKDKYEALEKALLNIFKNREKLLNSITKPTVTKSRIKVMVDNKNADIANVRDSSPTANNGS ASKQPQIITETSPYTFKQALDKQMARGNPKKSNAWGWANATRAQTSSAMNVKRIWESNTQCYQMLNLGKYQGVSVSSLNK ILKGKGTLNNQGKAFAEACKKHNINEIYLIAHAFLESGYGTSNFANGKDGVYNYFGIGAYDNNPNYAMTFARNKGWTSPA KAIMGGASFVRKDYINKGQNTLYRIRWNPKNPATHQYATAIEWCQHQASTIAKLYKQIGLKGIYFIRDKYK
Specific function: Endohydrolysis of the di-N-acetylchitobiosyl unit in high-mannose glycopeptides and glycoproteins containing the -[(Man)5(GlcNAc)2]-Asn structure. One N-acetyl-D-glucosamine residue remains attached to the protein; the rest of the oligosaccharide is relea
COG id: COG4193
COG function: function code G; Beta- N-acetylglucosaminidase
Gene ontology:
Cell location: Secreted. Note=Secreted, and then anchored on the cell surface at the peripheral cell wall above the completed septum (septal region), for the next cell division cycle [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: In the C-terminal section; belongs to the glycosyl hydrolase 73 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002502 - InterPro: IPR013338 - InterPro: IPR002901 [H]
Pfam domain/function: PF01510 Amidase_2; PF01832 Glucosaminidase [H]
EC number: =3.5.1.28; =3.2.1.96 [H]
Molecular weight: Translated: 72031; Mature: 71900
Theoretical pI: Translated: 9.77; Mature: 9.77
Prosite motif: PS50911 CHAP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGLPNPKNRKPTASEVVEWALYIAKNKIAIDVPGSGMGAQCWDLPNYLLDKYWGFRTWGN CCCCCCCCCCCCHHHHHHHHHHHCCCEEEEECCCCCCCCCHHCCHHHHHHHHCCCCCCCC ADAMAQKSNYRGRDFKIIRNTKDFVPQPGDWGVWTGGWAGHVNIVVGPCTKDYWYGVDQN CHHHHHHCCCCCCCEEEEECCHHCCCCCCCCCCCCCCCCCEEEEEEECCCCHHEECCCCC WYTNNATGSPPYKIKHSYHDGPGGGVKYFVRPPYHPEKSTPAPKPEDDSDDNEKNNKKVP CCCCCCCCCCCEEEEECCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCC IWKDVTTIKYTISSQEVNYPEYIYHFIVEGNRRLEKPKGIMIRNAQTMSSVESLYNSRKK EEECCEEEEEEECCCCCCCHHHEEEEEECCCCCCCCCCCEEEECHHHHHHHHHHHHHHHH YKQDVEYPHFYVDRHNIWAPRRAVFEVPNEPDYIVIDVCEDYSASKNEFIFNEIHAMVVA HHHCCCCCEEEEECCCCCCCCHHEEECCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHH VDMMAKYEIPLSIENLKVDDSIWRSMLEHVNWNMIDNGVPPKDKYEALEKALLNIFKNRE HHHHHHCCCCEEEECEECCHHHHHHHHHHCCCCEECCCCCCHHHHHHHHHHHHHHHHHHH KLLNSITKPTVTKSRIKVMVDNKNADIANVRDSSPTANNGSASKQPQIITETSPYTFKQA HHHHHHCCCCEECCEEEEEEECCCCCEEECCCCCCCCCCCCCCCCCEEEECCCCHHHHHH LDKQMARGNPKKSNAWGWANATRAQTSSAMNVKRIWESNTQCYQMLNLGKYQGVSVSSLN HHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCHHHHH KILKGKGTLNNQGKAFAEACKKHNINEIYLIAHAFLESGYGTSNFANGKDGVYNYFGIGA HHHHCCCCCCCCCHHHHHHHHHCCCCEEEEHHHHHHHCCCCCCCCCCCCCCCEEEEEEEE YDNNPNYAMTFARNKGWTSPAKAIMGGASFVRKDYINKGQNTLYRIRWNPKNPATHQYAT ECCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCHHHHH AIEWCQHQASTIAKLYKQIGLKGIYFIRDKYK HHHHHHHHHHHHHHHHHHHCCCEEEEEEECCC >Mature Secondary Structure GLPNPKNRKPTASEVVEWALYIAKNKIAIDVPGSGMGAQCWDLPNYLLDKYWGFRTWGN CCCCCCCCCCCHHHHHHHHHHHCCCEEEEECCCCCCCCCHHCCHHHHHHHHCCCCCCCC ADAMAQKSNYRGRDFKIIRNTKDFVPQPGDWGVWTGGWAGHVNIVVGPCTKDYWYGVDQN CHHHHHHCCCCCCCEEEEECCHHCCCCCCCCCCCCCCCCCEEEEEEECCCCHHEECCCCC WYTNNATGSPPYKIKHSYHDGPGGGVKYFVRPPYHPEKSTPAPKPEDDSDDNEKNNKKVP CCCCCCCCCCCEEEEECCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCC IWKDVTTIKYTISSQEVNYPEYIYHFIVEGNRRLEKPKGIMIRNAQTMSSVESLYNSRKK EEECCEEEEEEECCCCCCCHHHEEEEEECCCCCCCCCCCEEEECHHHHHHHHHHHHHHHH YKQDVEYPHFYVDRHNIWAPRRAVFEVPNEPDYIVIDVCEDYSASKNEFIFNEIHAMVVA HHHCCCCCEEEEECCCCCCCCHHEEECCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHH VDMMAKYEIPLSIENLKVDDSIWRSMLEHVNWNMIDNGVPPKDKYEALEKALLNIFKNRE HHHHHHCCCCEEEECEECCHHHHHHHHHHCCCCEECCCCCCHHHHHHHHHHHHHHHHHHH KLLNSITKPTVTKSRIKVMVDNKNADIANVRDSSPTANNGSASKQPQIITETSPYTFKQA HHHHHHCCCCEECCEEEEEEECCCCCEEECCCCCCCCCCCCCCCCCEEEECCCCHHHHHH LDKQMARGNPKKSNAWGWANATRAQTSSAMNVKRIWESNTQCYQMLNLGKYQGVSVSSLN HHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCHHHHH KILKGKGTLNNQGKAFAEACKKHNINEIYLIAHAFLESGYGTSNFANGKDGVYNYFGIGA HHHHCCCCCCCCCHHHHHHHHHCCCCEEEEHHHHHHHCCCCCCCCCCCCCCCEEEEEEEE YDNNPNYAMTFARNKGWTSPAKAIMGGASFVRKDYINKGQNTLYRIRWNPKNPATHQYAT ECCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCHHHHH AIEWCQHQASTIAKLYKQIGLKGIYFIRDKYK HHHHHHHHHHHHHHHHHHHCCCEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9220008 [H]