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The map label for this gene is ssb-p [H]

Identifier: 148267298

GI number: 148267298

Start: 928459

End: 928887

Strand: Direct

Name: ssb-p [H]

Synonym: SaurJH9_0864

Alternate gene names: 148267298

Gene position: 928459-928887 (Clockwise)

Preceding gene: 148267297

Following gene: 148267299

Centisome position: 31.94

GC content: 39.63

Gene sequence:

>429_bases
ATGTTAAACAGAGCAGTATTAGTAGGACGCTTAACAAAAGACCCAGAATTAAGAAGCGCGCCAAATGGCGTAAATGTAGG
TACATTCACATTGGCAGTAAACAGAACATTCACGAATGCTCAAGGCGAGCGTGAAGCAGATTTTATAAACGTAGTAGTGT
TCAAGAAACAAGCTGAAAATGTTAAAAACTACCTTTCTAAAGGGTCGCTGGCAGGTGTAGACGGGCGACTACAAACACGT
AGCTACGAAAATAAAGTCGGGCAACGTGTATTTGTGACAGAAGTAGTAGCGGACAGTGTTCAATTCTTAGAACCGAAGAA
TAACAACCAACAACCAAACAACAATTATCATCAACAAAGACAAACTCAAACTGGTAATAATCCTTTTGATAATACCACTG
CGATTACTGATGATGACTTACCGTTCTGA

Upstream 100 bases:

>100_bases
AAATATCTAACATTAATAAATTAAGTCAAAAACAAATCGCAGAAGCACACCAAAAATTAGATGCGGGATTAAAACAATTG
GATAGTGAGGAGAAACAATA

Downstream 100 bases:

>100_bases
TTGGAATGATTAAATGCCGAAAATTACTAGTTATATCACTCAAGACGACGGCACAACAACAGTTGTCATCTCTGATGTTG
AATTAGGCAATAAAGAAACA

Product: single-strand binding protein

Products: NA

Alternate protein names: SSB; Helix-destabilizing protein [H]

Number of amino acids: Translated: 142; Mature: 142

Protein sequence:

>142_residues
MLNRAVLVGRLTKDPELRSAPNGVNVGTFTLAVNRTFTNAQGEREADFINVVVFKKQAENVKNYLSKGSLAGVDGRLQTR
SYENKVGQRVFVTEVVADSVQFLEPKNNNQQPNNNYHQQRQTQTGNNPFDNTTAITDDDLPF

Sequences:

>Translated_142_residues
MLNRAVLVGRLTKDPELRSAPNGVNVGTFTLAVNRTFTNAQGEREADFINVVVFKKQAENVKNYLSKGSLAGVDGRLQTR
SYENKVGQRVFVTEVVADSVQFLEPKNNNQQPNNNYHQQRQTQTGNNPFDNTTAITDDDLPF
>Mature_142_residues
MLNRAVLVGRLTKDPELRSAPNGVNVGTFTLAVNRTFTNAQGEREADFINVVVFKKQAENVKNYLSKGSLAGVDGRLQTR
SYENKVGQRVFVTEVVADSVQFLEPKNNNQQPNNNYHQQRQTQTGNNPFDNTTAITDDDLPF

Specific function: This protein is essential for replication of the chromosome. It is also involved in DNA recombination and repair. This specific ssb is encoded in the L54a prophage and may be involved in phage replication [H]

COG id: COG0629

COG function: function code L; Single-stranded DNA-binding protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 SSB domain [H]

Homologues:

Organism=Escherichia coli, GI1790494, Length=117, Percent_Identity=36.7521367521368, Blast_Score=74, Evalue=4e-15,

Paralogues:

None

Copy number: 1622 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 2,000 Molecules/Cell In: Glucose minimal media [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012340
- InterPro:   IPR016027
- InterPro:   IPR000424
- InterPro:   IPR011344 [H]

Pfam domain/function: PF00436 SSB [H]

EC number: NA

Molecular weight: Translated: 15873; Mature: 15873

Theoretical pI: Translated: 8.97; Mature: 8.97

Prosite motif: PS50935 SSB

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
0.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
0.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLNRAVLVGRLTKDPELRSAPNGVNVGTFTLAVNRTFTNAQGEREADFINVVVFKKQAEN
CCCCEEEEEECCCCCCCCCCCCCCCCEEEEEEEECEECCCCCCCCCCEEEEEEEHHHHHH
VKNYLSKGSLAGVDGRLQTRSYENKVGQRVFVTEVVADSVQFLEPKNNNQQPNNNYHQQR
HHHHHHCCCCCCCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHH
QTQTGNNPFDNTTAITDDDLPF
HHCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MLNRAVLVGRLTKDPELRSAPNGVNVGTFTLAVNRTFTNAQGEREADFINVVVFKKQAEN
CCCCEEEEEECCCCCCCCCCCCCCCCEEEEEEEECEECCCCCCCCCCEEEEEEEHHHHHH
VKNYLSKGSLAGVDGRLQTRSYENKVGQRVFVTEVVADSVQFLEPKNNNQQPNNNYHQQR
HHHHHHCCCCCCCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHH
QTQTGNNPFDNTTAITDDDLPF
HHCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA