Click here to switch to the map view.

The map label for this gene is yfhC [H]

Identifier: 148267264

GI number: 148267264

Start: 905631

End: 906170

Strand: Direct

Name: yfhC [H]

Synonym: SaurJH9_0829

Alternate gene names: 148267264

Gene position: 905631-906170 (Clockwise)

Preceding gene: 148267263

Following gene: 148267266

Centisome position: 31.16

GC content: 32.96

Gene sequence:

>540_bases
ATGGAATTACAACAAGCAATAGCTAATAGAAGAAGTGTGAAAAAATTTAAAAGAGATATGCACATAGATGACGCATTGCT
ATATCAAGCAATTGAGAAAGCTGCTGATGCTCCAAATCACGGAATGAGGGAACCATGGAGAGTTGTGCATGTTCCGAAAG
ACAGATTAGGAGATATGAGTAAGGATATTTCTAAATTTGCATTTCCTAATGAATTAGATAAGCAACAATGTCATTATGAT
GCAGTAACGAAACTAGGTGGCATGTTATTGCTTATTTTAAAAACAGATCCAAGACAACGTCAAAATGATGAAAACTACTT
TGCATTTGGTGCATATGCACAAAATCTTATGTTGTTACTTTATGAAGCGGGGATAGGTACATGTTGGAAATCGCCATTAT
ATATCTATGATCCTAAAGTAAGAAAAACACTTGGTATAAAGAAAGATGAAGTTCTTGCTGGATTCTTATATTTAACGGAT
TTAGAAGAAGATATGCCTAAAGCACCACGTAAAAATAGAAACTTAATTACATTATATTAA

Upstream 100 bases:

>100_bases
CAAGTGACTTTATACTAATAAAATGAATTAGGTTGCTTTTGTGTAAGTGCTGTCTTATAATTGAGAAGTATTATCATTGT
TCGTGGAGGAGCGATTTTAG

Downstream 100 bases:

>100_bases
TATGTATAATTATAGAAAACATTAATAAAAGCTGAGACATGAATTGATGGACATCTATCGAGTTAGAGATTTAATCTAAT
TTACTAGAGTCGGTACAATC

Product: nitroreductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 179; Mature: 179

Protein sequence:

>179_residues
MELQQAIANRRSVKKFKRDMHIDDALLYQAIEKAADAPNHGMREPWRVVHVPKDRLGDMSKDISKFAFPNELDKQQCHYD
AVTKLGGMLLLILKTDPRQRQNDENYFAFGAYAQNLMLLLYEAGIGTCWKSPLYIYDPKVRKTLGIKKDEVLAGFLYLTD
LEEDMPKAPRKNRNLITLY

Sequences:

>Translated_179_residues
MELQQAIANRRSVKKFKRDMHIDDALLYQAIEKAADAPNHGMREPWRVVHVPKDRLGDMSKDISKFAFPNELDKQQCHYD
AVTKLGGMLLLILKTDPRQRQNDENYFAFGAYAQNLMLLLYEAGIGTCWKSPLYIYDPKVRKTLGIKKDEVLAGFLYLTD
LEEDMPKAPRKNRNLITLY
>Mature_179_residues
MELQQAIANRRSVKKFKRDMHIDDALLYQAIEKAADAPNHGMREPWRVVHVPKDRLGDMSKDISKFAFPNELDKQQCHYD
AVTKLGGMLLLILKTDPRQRQNDENYFAFGAYAQNLMLLLYEAGIGTCWKSPLYIYDPKVRKTLGIKKDEVLAGFLYLTD
LEEDMPKAPRKNRNLITLY

Specific function: Unknown

COG id: COG0778

COG function: function code C; Nitroreductase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the nitroreductase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000415 [H]

Pfam domain/function: PF00881 Nitroreductase [H]

EC number: NA

Molecular weight: Translated: 20749; Mature: 20749

Theoretical pI: Translated: 9.23; Mature: 9.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MELQQAIANRRSVKKFKRDMHIDDALLYQAIEKAADAPNHGMREPWRVVHVPKDRLGDMS
CCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEECCHHHHCHHH
KDISKFAFPNELDKQQCHYDAVTKLGGMLLLILKTDPRQRQNDENYFAFGAYAQNLMLLL
HHHHHHCCCCCCCHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCCEEEEHHHHHHHHHHH
YEAGIGTCWKSPLYIYDPKVRKTLGIKKDEVLAGFLYLTDLEEDMPKAPRKNRNLITLY
HHCCCCHHHCCCEEEECCHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEC
>Mature Secondary Structure
MELQQAIANRRSVKKFKRDMHIDDALLYQAIEKAADAPNHGMREPWRVVHVPKDRLGDMS
CCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEECCHHHHCHHH
KDISKFAFPNELDKQQCHYDAVTKLGGMLLLILKTDPRQRQNDENYFAFGAYAQNLMLLL
HHHHHHCCCCCCCHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCCEEEEHHHHHHHHHHH
YEAGIGTCWKSPLYIYDPKVRKTLGIKKDEVLAGFLYLTDLEEDMPKAPRKNRNLITLY
HHCCCCHHHCCCEEEECCHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8946165; 9384377 [H]