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The map label for this gene is yfmR [H]

Identifier: 148267179

GI number: 148267179

Start: 810507

End: 812384

Strand: Direct

Name: yfmR [H]

Synonym: SaurJH9_0743

Alternate gene names: 148267179

Gene position: 810507-812384 (Clockwise)

Preceding gene: 148267178

Following gene: 148267180

Centisome position: 27.88

GC content: 33.28

Gene sequence:

>1878_bases
ATGGAAGCATATAAAATTGAACATTTAAATAAATCTTATGCCGATAAGACTATATTCGATAACCTAGATTTATCAATTTC
AGAAGGTGAAAAAATAGGTTTGGTGGGCATAAATGGTACAGGGAAAAGTACGTTGTTAAAAGTAATTGGTGGTATTGATG
ATGATTTTACAGCCAATGTTATGCATCCAAATCAATATCGAATTCGATATTCGTCTCAGAAACAGGACCTTAATGAAGAT
ATGACAGTTTTTGATGCAGTATTAAGTTCTGATACAACAACTTTACGCATCATCAAGCAATATGAGCAGGCAGTACAAGC
TTATGCGGATGACCAAAGTGATAAATTGTTCAAGCGAATGATAGATGCGCAAGATGCTATGGATCAACATGATGCTTGGG
ACTATAACGCTGAAATTAAAACAATCCTCTCAAAACTAGGTATACATGATACTACTAAATACATTAAAGAATTATCCGGC
GGACAACAAAAACGTGTTGTACTTGCTAAAACATTAATAGAACAACCAGATTTATTGTTATTAGATGAACCTACGAACCA
TTTAGACTTCGAATCAATCAGCTGGTTGATCAATTATGTGAAGCAATATCCTCATACAGTTTTATTCGTAACCCATGATC
GATATTTTTTAAATGAAGTTTCCACTAGAATTATTGAACTAAACAGAGGTAAGTTAGCGTCATATCCTGGTAACTATGAA
TCTTATATTGAAATGCGCGCTGAAAGAGAAGTAACACTTCAAAAGCAACAACAAAAGCAACGAGCTTTATATAAGGAAGA
ACTTGCTTGGATGAGGGCTGGAGCTAAGGCTCGTACTACAAAGCAACAAGCTAGAATTAATCGATTTAATGACCTAGAAA
ATGAAGTTAACCAGCAATATAAAGACGATAAAGGTGAATTGAATCTTGCTTATTCAAGATTAGGTAAGCAAGTGTTCGAA
TTAGAAGACTTATCAAAGGCTATTAATGATAAAGTATTATTTGAACATCTGACGGAAATTATTCAAAAAGGTGAGCGTAT
TGGTGTTGTTGGGCCAAATGGAGCTGGTAAAACAACACTCTTAAATATTTTGAGTGGAGAAGACCAACAATTCGAAGGTA
AATTGAAGACTGGGCAGACGGTTAAAGTAGCTTATTTTAAGCAAACAGATGAGACCCTGGATAGAGATATTCGTATGATT
GATTATTTAAGAGAAGAAAGTGAGGTCGCAAAAGAAAAAGATGGAACCTCGGTATCTATTACACAACTTCTTGAACGATT
TTTATTTCCAAGTGCAACTCATGGTAAAAAAGTTTATAAATTATCTGGTGGAGAGCAAAAGCGTTTGTATTTATTACGTC
TACTCGTACACCAGCCAAATGTTCTGTTGTTAGATGAACCGACAAATGATTTAGATACTGAGACTTTAACAATACTTGAA
GATTATATTCATACTTTCGGTGGTACAGTGATTACCGTAAGCCATGATCGCTACTTCTTAAATAAAGTTGCACAGTCATA
TTGGTTTATTCATGATGGTCAGATGGAAAAGATTATCGGAACTTTTGAAGATTATGAAAGTTATAAAAAATCATTAGATA
AAAATAAATCCACATTGAAGCAACAATCTAAATCTTATACAACTGTACGTAAGAAAAATGGTTTATCATATAAAGAAAAA
TTAGAATATGAACAATTGATGAAACGCATAGAACAAGCGGAAGTAAGAATGGAAGAAATTGATGTGCTCATGATTGAGGC
AAGTGCAGATTATGGGAAAATTAAAGAACTAAACGAAGAAAAAGAACAACTTGAAATTCAATATGATTTAGACATCACAA
GATGGAGTGAGTTAGAAGAAATTAAAGAACAACAATAA

Upstream 100 bases:

>100_bases
GACACTTAACGGTATCGATTTCTTTTGATTTCAAAAAGGTGTATAATGTATAGAACTGATTTAAGTACGTAGAGATTTCA
ACAGAAGAAGGAAGATGGGT

Downstream 100 bases:

>100_bases
GGGGTCAATTTATGATGCAACAAACATTATCGCATTACTTTGGGTATGAAACATTTCGACCAGGACAAGAAGAAATTATT
AGCAAAGTATTAGACCATCG

Product: ABC transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 625; Mature: 625

Protein sequence:

>625_residues
MEAYKIEHLNKSYADKTIFDNLDLSISEGEKIGLVGINGTGKSTLLKVIGGIDDDFTANVMHPNQYRIRYSSQKQDLNED
MTVFDAVLSSDTTTLRIIKQYEQAVQAYADDQSDKLFKRMIDAQDAMDQHDAWDYNAEIKTILSKLGIHDTTKYIKELSG
GQQKRVVLAKTLIEQPDLLLLDEPTNHLDFESISWLINYVKQYPHTVLFVTHDRYFLNEVSTRIIELNRGKLASYPGNYE
SYIEMRAEREVTLQKQQQKQRALYKEELAWMRAGAKARTTKQQARINRFNDLENEVNQQYKDDKGELNLAYSRLGKQVFE
LEDLSKAINDKVLFEHLTEIIQKGERIGVVGPNGAGKTTLLNILSGEDQQFEGKLKTGQTVKVAYFKQTDETLDRDIRMI
DYLREESEVAKEKDGTSVSITQLLERFLFPSATHGKKVYKLSGGEQKRLYLLRLLVHQPNVLLLDEPTNDLDTETLTILE
DYIHTFGGTVITVSHDRYFLNKVAQSYWFIHDGQMEKIIGTFEDYESYKKSLDKNKSTLKQQSKSYTTVRKKNGLSYKEK
LEYEQLMKRIEQAEVRMEEIDVLMIEASADYGKIKELNEEKEQLEIQYDLDITRWSELEEIKEQQ

Sequences:

>Translated_625_residues
MEAYKIEHLNKSYADKTIFDNLDLSISEGEKIGLVGINGTGKSTLLKVIGGIDDDFTANVMHPNQYRIRYSSQKQDLNED
MTVFDAVLSSDTTTLRIIKQYEQAVQAYADDQSDKLFKRMIDAQDAMDQHDAWDYNAEIKTILSKLGIHDTTKYIKELSG
GQQKRVVLAKTLIEQPDLLLLDEPTNHLDFESISWLINYVKQYPHTVLFVTHDRYFLNEVSTRIIELNRGKLASYPGNYE
SYIEMRAEREVTLQKQQQKQRALYKEELAWMRAGAKARTTKQQARINRFNDLENEVNQQYKDDKGELNLAYSRLGKQVFE
LEDLSKAINDKVLFEHLTEIIQKGERIGVVGPNGAGKTTLLNILSGEDQQFEGKLKTGQTVKVAYFKQTDETLDRDIRMI
DYLREESEVAKEKDGTSVSITQLLERFLFPSATHGKKVYKLSGGEQKRLYLLRLLVHQPNVLLLDEPTNDLDTETLTILE
DYIHTFGGTVITVSHDRYFLNKVAQSYWFIHDGQMEKIIGTFEDYESYKKSLDKNKSTLKQQSKSYTTVRKKNGLSYKEK
LEYEQLMKRIEQAEVRMEEIDVLMIEASADYGKIKELNEEKEQLEIQYDLDITRWSELEEIKEQQ
>Mature_625_residues
MEAYKIEHLNKSYADKTIFDNLDLSISEGEKIGLVGINGTGKSTLLKVIGGIDDDFTANVMHPNQYRIRYSSQKQDLNED
MTVFDAVLSSDTTTLRIIKQYEQAVQAYADDQSDKLFKRMIDAQDAMDQHDAWDYNAEIKTILSKLGIHDTTKYIKELSG
GQQKRVVLAKTLIEQPDLLLLDEPTNHLDFESISWLINYVKQYPHTVLFVTHDRYFLNEVSTRIIELNRGKLASYPGNYE
SYIEMRAEREVTLQKQQQKQRALYKEELAWMRAGAKARTTKQQARINRFNDLENEVNQQYKDDKGELNLAYSRLGKQVFE
LEDLSKAINDKVLFEHLTEIIQKGERIGVVGPNGAGKTTLLNILSGEDQQFEGKLKTGQTVKVAYFKQTDETLDRDIRMI
DYLREESEVAKEKDGTSVSITQLLERFLFPSATHGKKVYKLSGGEQKRLYLLRLLVHQPNVLLLDEPTNDLDTETLTILE
DYIHTFGGTVITVSHDRYFLNKVAQSYWFIHDGQMEKIIGTFEDYESYKKSLDKNKSTLKQQSKSYTTVRKKNGLSYKEK
LEYEQLMKRIEQAEVRMEEIDVLMIEASADYGKIKELNEEKEQLEIQYDLDITRWSELEEIKEQQ

Specific function: Unknown

COG id: COG0488

COG function: function code R; ATPase components of ABC transporters with duplicated ATPase domains

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 ABC transporter domains [H]

Homologues:

Organism=Homo sapiens, GI148612853, Length=539, Percent_Identity=29.4990723562152, Blast_Score=235, Evalue=8e-62,
Organism=Homo sapiens, GI69354671, Length=538, Percent_Identity=32.3420074349442, Blast_Score=216, Evalue=7e-56,
Organism=Homo sapiens, GI10947135, Length=538, Percent_Identity=32.3420074349442, Blast_Score=216, Evalue=7e-56,
Organism=Homo sapiens, GI27881506, Length=538, Percent_Identity=30.4832713754647, Blast_Score=204, Evalue=2e-52,
Organism=Homo sapiens, GI10947137, Length=538, Percent_Identity=30.4832713754647, Blast_Score=204, Evalue=3e-52,
Organism=Escherichia coli, GI2367384, Length=532, Percent_Identity=37.218045112782, Blast_Score=357, Evalue=1e-99,
Organism=Escherichia coli, GI1787182, Length=634, Percent_Identity=33.7539432176656, Blast_Score=326, Evalue=3e-90,
Organism=Escherichia coli, GI1787041, Length=520, Percent_Identity=31.1538461538462, Blast_Score=246, Evalue=3e-66,
Organism=Escherichia coli, GI1789751, Length=595, Percent_Identity=29.2436974789916, Blast_Score=243, Evalue=3e-65,
Organism=Escherichia coli, GI1788225, Length=238, Percent_Identity=27.3109243697479, Blast_Score=100, Evalue=3e-22,
Organism=Escherichia coli, GI1788761, Length=241, Percent_Identity=27.3858921161826, Blast_Score=94, Evalue=2e-20,
Organism=Escherichia coli, GI145693107, Length=568, Percent_Identity=23.0633802816901, Blast_Score=94, Evalue=2e-20,
Organism=Escherichia coli, GI1789672, Length=257, Percent_Identity=27.6264591439689, Blast_Score=88, Evalue=2e-18,
Organism=Escherichia coli, GI1787029, Length=235, Percent_Identity=25.531914893617, Blast_Score=85, Evalue=1e-17,
Organism=Escherichia coli, GI1787105, Length=241, Percent_Identity=27.8008298755187, Blast_Score=79, Evalue=9e-16,
Organism=Escherichia coli, GI1787164, Length=199, Percent_Identity=28.1407035175879, Blast_Score=75, Evalue=2e-14,
Organism=Escherichia coli, GI1789891, Length=229, Percent_Identity=23.5807860262009, Blast_Score=74, Evalue=2e-14,
Organism=Escherichia coli, GI1788506, Length=232, Percent_Identity=26.2931034482759, Blast_Score=73, Evalue=7e-14,
Organism=Escherichia coli, GI1787500, Length=226, Percent_Identity=23.8938053097345, Blast_Score=72, Evalue=8e-14,
Organism=Escherichia coli, GI1786703, Length=206, Percent_Identity=29.126213592233, Blast_Score=72, Evalue=1e-13,
Organism=Escherichia coli, GI1788165, Length=192, Percent_Identity=29.6875, Blast_Score=71, Evalue=2e-13,
Organism=Escherichia coli, GI87081709, Length=231, Percent_Identity=25.1082251082251, Blast_Score=71, Evalue=2e-13,
Organism=Escherichia coli, GI1788644, Length=95, Percent_Identity=41.0526315789474, Blast_Score=71, Evalue=3e-13,
Organism=Escherichia coli, GI1786698, Length=216, Percent_Identity=28.2407407407407, Blast_Score=68, Evalue=2e-12,
Organism=Escherichia coli, GI1789963, Length=242, Percent_Identity=25.2066115702479, Blast_Score=68, Evalue=2e-12,
Organism=Escherichia coli, GI1786872, Length=204, Percent_Identity=25.9803921568627, Blast_Score=67, Evalue=5e-12,
Organism=Escherichia coli, GI1787712, Length=212, Percent_Identity=25.9433962264151, Blast_Score=65, Evalue=1e-11,
Organism=Escherichia coli, GI1787758, Length=189, Percent_Identity=28.042328042328, Blast_Score=65, Evalue=1e-11,
Organism=Escherichia coli, GI48994883, Length=241, Percent_Identity=24.4813278008299, Blast_Score=64, Evalue=2e-11,
Organism=Escherichia coli, GI87081791, Length=223, Percent_Identity=25.1121076233184, Blast_Score=63, Evalue=7e-11,
Organism=Caenorhabditis elegans, GI17559834, Length=543, Percent_Identity=30.2025782688766, Blast_Score=240, Evalue=2e-63,
Organism=Caenorhabditis elegans, GI17555318, Length=549, Percent_Identity=28.9617486338798, Blast_Score=212, Evalue=4e-55,
Organism=Caenorhabditis elegans, GI17553372, Length=548, Percent_Identity=31.9343065693431, Blast_Score=211, Evalue=7e-55,
Organism=Caenorhabditis elegans, GI17555800, Length=530, Percent_Identity=23.7735849056604, Blast_Score=76, Evalue=4e-14,
Organism=Caenorhabditis elegans, GI17542146, Length=293, Percent_Identity=23.8907849829352, Blast_Score=71, Evalue=2e-12,
Organism=Saccharomyces cerevisiae, GI6320874, Length=547, Percent_Identity=31.2614259597806, Blast_Score=216, Evalue=9e-57,
Organism=Saccharomyces cerevisiae, GI6321121, Length=546, Percent_Identity=29.4871794871795, Blast_Score=206, Evalue=7e-54,
Organism=Saccharomyces cerevisiae, GI6324314, Length=382, Percent_Identity=27.7486910994764, Blast_Score=125, Evalue=3e-29,
Organism=Saccharomyces cerevisiae, GI6323278, Length=382, Percent_Identity=27.7486910994764, Blast_Score=123, Evalue=1e-28,
Organism=Saccharomyces cerevisiae, GI6325030, Length=383, Percent_Identity=26.1096605744125, Blast_Score=117, Evalue=7e-27,
Organism=Drosophila melanogaster, GI24642252, Length=553, Percent_Identity=29.6564195298373, Blast_Score=221, Evalue=1e-57,
Organism=Drosophila melanogaster, GI18859989, Length=553, Percent_Identity=29.6564195298373, Blast_Score=221, Evalue=1e-57,
Organism=Drosophila melanogaster, GI24666836, Length=539, Percent_Identity=29.4990723562152, Blast_Score=219, Evalue=6e-57,
Organism=Drosophila melanogaster, GI24641342, Length=540, Percent_Identity=30, Blast_Score=216, Evalue=3e-56,
Organism=Drosophila melanogaster, GI24659289, Length=199, Percent_Identity=27.6381909547739, Blast_Score=71, Evalue=2e-12,
Organism=Drosophila melanogaster, GI24581191, Length=181, Percent_Identity=30.939226519337, Blast_Score=70, Evalue=6e-12,
Organism=Drosophila melanogaster, GI24581189, Length=181, Percent_Identity=30.939226519337, Blast_Score=70, Evalue=6e-12,
Organism=Drosophila melanogaster, GI24581193, Length=181, Percent_Identity=30.939226519337, Blast_Score=70, Evalue=6e-12,
Organism=Drosophila melanogaster, GI24581195, Length=181, Percent_Identity=30.939226519337, Blast_Score=70, Evalue=6e-12,
Organism=Drosophila melanogaster, GI28574744, Length=174, Percent_Identity=33.9080459770115, Blast_Score=69, Evalue=9e-12,
Organism=Drosophila melanogaster, GI17136662, Length=189, Percent_Identity=29.1005291005291, Blast_Score=67, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR017871
- InterPro:   IPR003593 [H]

Pfam domain/function: PF00005 ABC_tran [H]

EC number: NA

Molecular weight: Translated: 72455; Mature: 72455

Theoretical pI: Translated: 5.14; Mature: 5.14

Prosite motif: PS00211 ABC_TRANSPORTER_1 ; PS50893 ABC_TRANSPORTER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEAYKIEHLNKSYADKTIFDNLDLSISEGEKIGLVGINGTGKSTLLKVIGGIDDDFTANV
CCCCCHHHCCHHHCCHHHHCCCCEEECCCCEEEEEEECCCCHHHHHHHHCCCCCCCEEEC
MHPNQYRIRYSSQKQDLNEDMTVFDAVLSSDTTTLRIIKQYEQAVQAYADDQSDKLFKRM
CCCCCEEEEECCCHHCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHH
IDAQDAMDQHDAWDYNAEIKTILSKLGIHDTTKYIKELSGGQQKRVVLAKTLIEQPDLLL
HHHHHHHHHCCCCCCCHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHCCCCEEE
LDEPTNHLDFESISWLINYVKQYPHTVLFVTHDRYFLNEVSTRIIELNRGKLASYPGNYE
EECCCCCCCHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHEEECCCCCCCCCCCHH
SYIEMRAEREVTLQKQQQKQRALYKEELAWMRAGAKARTTKQQARINRFNDLENEVNQQY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH
KDDKGELNLAYSRLGKQVFELEDLSKAINDKVLFEHLTEIIQKGERIGVVGPNGAGKTTL
CCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHH
LNILSGEDQQFEGKLKTGQTVKVAYFKQTDETLDRDIRMIDYLREESEVAKEKDGTSVSI
HHHHCCCCHHHCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEH
TQLLERFLFPSATHGKKVYKLSGGEQKRLYLLRLLVHQPNVLLLDEPTNDLDTETLTILE
HHHHHHHHCCCCCCCCEEEEECCCCHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHH
DYIHTFGGTVITVSHDRYFLNKVAQSYWFIHDGQMEKIIGTFEDYESYKKSLDKNKSTLK
HHHHHHCCEEEEEECCHHHHHHHHHHHEEEECCCHHHHHHHHHHHHHHHHHHCCCHHHHH
QQSKSYTTVRKKNGLSYKEKLEYEQLMKRIEQAEVRMEEIDVLMIEASADYGKIKELNEE
HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCHHHHHHCCH
KEQLEIQYDLDITRWSELEEIKEQQ
HHHEEEEEECCHHHHHHHHHHHHCC
>Mature Secondary Structure
MEAYKIEHLNKSYADKTIFDNLDLSISEGEKIGLVGINGTGKSTLLKVIGGIDDDFTANV
CCCCCHHHCCHHHCCHHHHCCCCEEECCCCEEEEEEECCCCHHHHHHHHCCCCCCCEEEC
MHPNQYRIRYSSQKQDLNEDMTVFDAVLSSDTTTLRIIKQYEQAVQAYADDQSDKLFKRM
CCCCCEEEEECCCHHCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHH
IDAQDAMDQHDAWDYNAEIKTILSKLGIHDTTKYIKELSGGQQKRVVLAKTLIEQPDLLL
HHHHHHHHHCCCCCCCHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHCCCCEEE
LDEPTNHLDFESISWLINYVKQYPHTVLFVTHDRYFLNEVSTRIIELNRGKLASYPGNYE
EECCCCCCCHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHEEECCCCCCCCCCCHH
SYIEMRAEREVTLQKQQQKQRALYKEELAWMRAGAKARTTKQQARINRFNDLENEVNQQY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH
KDDKGELNLAYSRLGKQVFELEDLSKAINDKVLFEHLTEIIQKGERIGVVGPNGAGKTTL
CCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHH
LNILSGEDQQFEGKLKTGQTVKVAYFKQTDETLDRDIRMIDYLREESEVAKEKDGTSVSI
HHHHCCCCHHHCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEH
TQLLERFLFPSATHGKKVYKLSGGEQKRLYLLRLLVHQPNVLLLDEPTNDLDTETLTILE
HHHHHHHHCCCCCCCCEEEEECCCCHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHH
DYIHTFGGTVITVSHDRYFLNKVAQSYWFIHDGQMEKIIGTFEDYESYKKSLDKNKSTLK
HHHHHHCCEEEEEECCHHHHHHHHHHHEEEECCCHHHHHHHHHHHHHHHHHHCCCHHHHH
QQSKSYTTVRKKNGLSYKEKLEYEQLMKRIEQAEVRMEEIDVLMIEASADYGKIKELNEE
HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCHHHHHHCCH
KEQLEIQYDLDITRWSELEEIKEQQ
HHHEEEEEECCHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9141694; 9384377 [H]