Definition | Staphylococcus aureus subsp. aureus JH9, complete genome. |
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Accession | NC_009487 |
Length | 2,906,700 |
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The map label for this gene is csbB [H]
Identifier: 148267164
GI number: 148267164
Start: 796276
End: 797259
Strand: Direct
Name: csbB [H]
Synonym: SaurJH9_0728
Alternate gene names: 148267164
Gene position: 796276-797259 (Clockwise)
Preceding gene: 148267163
Following gene: 148267173
Centisome position: 27.39
GC content: 31.2
Gene sequence:
>984_bases ATGAAAATTAGAGTCGTCATTCCTTGTTTTAATGAAGGGGAAGTCATTACACAAACACATCAACAATTAACTGAAATACT TTCACAAGATAGTAGTGTGAAAGGCTATGATTATAATATGCTTTTCATAGATGATGGAAGTACGGATACCACTATAGATG AAATGCAACATCTTGCCACAATAGATAGGCATGTCAGCTTTATTTCTTTTAGTAGAAATTTTGGAAAAGAAGCAGCTATG ATTGCAGGTTACCAGCATAGTACTGAATTTGATGCAGTCATCATGATAGATTGTGATTTGCAACATCCACCTGAATATAT TCCGAAAATGGTTGAAGGTTTTATGGAAGGCTATGATCAAGTGATTGCAAAGCGTGATAGAAGTGGTGAAAATTTTAGTC GCAAAACATTAAGCCATTTGTATTATAAGTTAGTTAATTGCTTTGTAGAAGAAGTACAATTTGATGATGGTGTTGGTGAT TTTAGACTTTTAAGCCAAAGAGCTGTTAAATCCATTGCATCACTTGAAGAATATAATCGATTTTCAAAAGGGTTATTTGA ATGGATAGGCTATAATACTAAAGTGTTTACGTATCAAAATGTTGAGAGACAAAAAGGGGAATCTAAGTGGTCCTTTAAAA AGTTATTTAATTATGGTATTGATGGATTGATTTCCTTTAATAGTAAACCTTTGAGAATGATGATTTATCTTGGCTTGTTT ATCTTTTCAATAAGCGTGCTATATATTATCTATTTATTCATCAATATTATGATATCTGGTGTTAATATTCCAGGATATTT TTCAACGATTGCAGCTATTTTATTATTAGGCGGCATACAGTTAATTTCAATTGGTGTTGTAGGTGAATATATTGGCAGGA TATATTATGAAGTTAAGGCACGTCCTAAATATATTATTCAAGCTACAAATCTTTCAAGTATTGAAAATGATGAGAAGGAT ACCCATAAAGTTTATTCTAAATAA
Upstream 100 bases:
>100_bases TTTTAATGTGTACATTAAAATAAATGAGTTGGTTTTTACTATTTGATAAAACAATACTCAGGTACATTCAAAATCTTTTA AATAAAAAGGATGGACATAG
Downstream 100 bases:
>100_bases ACAAAAAAAGAAGCCCTCATTAATGGGAGCTTCTTTTTAGTCTTTGCATTTTATTTTATAAATAAATCGGATTATGACGT AATGTCTAATTTGTGTAATG
Product: glycosyl transferase family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 327; Mature: 327
Protein sequence:
>327_residues MKIRVVIPCFNEGEVITQTHQQLTEILSQDSSVKGYDYNMLFIDDGSTDTTIDEMQHLATIDRHVSFISFSRNFGKEAAM IAGYQHSTEFDAVIMIDCDLQHPPEYIPKMVEGFMEGYDQVIAKRDRSGENFSRKTLSHLYYKLVNCFVEEVQFDDGVGD FRLLSQRAVKSIASLEEYNRFSKGLFEWIGYNTKVFTYQNVERQKGESKWSFKKLFNYGIDGLISFNSKPLRMMIYLGLF IFSISVLYIIYLFINIMISGVNIPGYFSTIAAILLLGGIQLISIGVVGEYIGRIYYEVKARPKYIIQATNLSSIENDEKD THKVYSK
Sequences:
>Translated_327_residues MKIRVVIPCFNEGEVITQTHQQLTEILSQDSSVKGYDYNMLFIDDGSTDTTIDEMQHLATIDRHVSFISFSRNFGKEAAM IAGYQHSTEFDAVIMIDCDLQHPPEYIPKMVEGFMEGYDQVIAKRDRSGENFSRKTLSHLYYKLVNCFVEEVQFDDGVGD FRLLSQRAVKSIASLEEYNRFSKGLFEWIGYNTKVFTYQNVERQKGESKWSFKKLFNYGIDGLISFNSKPLRMMIYLGLF IFSISVLYIIYLFINIMISGVNIPGYFSTIAAILLLGGIQLISIGVVGEYIGRIYYEVKARPKYIIQATNLSSIENDEKD THKVYSK >Mature_327_residues MKIRVVIPCFNEGEVITQTHQQLTEILSQDSSVKGYDYNMLFIDDGSTDTTIDEMQHLATIDRHVSFISFSRNFGKEAAM IAGYQHSTEFDAVIMIDCDLQHPPEYIPKMVEGFMEGYDQVIAKRDRSGENFSRKTLSHLYYKLVNCFVEEVQFDDGVGD FRLLSQRAVKSIASLEEYNRFSKGLFEWIGYNTKVFTYQNVERQKGESKWSFKKLFNYGIDGLISFNSKPLRMMIYLGLF IFSISVLYIIYLFINIMISGVNIPGYFSTIAAILLLGGIQLISIGVVGEYIGRIYYEVKARPKYIIQATNLSSIENDEKD THKVYSK
Specific function: Involved In O Antigen Modification. Catalyzes The Transfer Of The Glucose Residue From Udp-Glucose To A Lipid Carrier (By Similarity). [C]
COG id: COG0463
COG function: function code M; Glycosyltransferases involved in cell wall biogenesis
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyltransferase 2 family. GtrB subfamily [H]
Homologues:
Organism=Escherichia coli, GI1788692, Length=308, Percent_Identity=42.2077922077922, Blast_Score=245, Evalue=3e-66, Organism=Escherichia coli, GI1788588, Length=322, Percent_Identity=33.2298136645963, Blast_Score=157, Evalue=7e-40,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001173 [H]
Pfam domain/function: PF00535 Glycos_transf_2 [H]
EC number: 2.4.1.- [C]
Molecular weight: Translated: 37578; Mature: 37578
Theoretical pI: Translated: 5.92; Mature: 5.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIRVVIPCFNEGEVITQTHQQLTEILSQDSSVKGYDYNMLFIDDGSTDTTIDEMQHLAT CEEEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHH IDRHVSFISFSRNFGKEAAMIAGYQHSTEFDAVIMIDCDLQHPPEYIPKMVEGFMEGYDQ HHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHH VIAKRDRSGENFSRKTLSHLYYKLVNCFVEEVQFDDGVGDFRLLSQRAVKSIASLEEYNR HHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH FSKGLFEWIGYNTKVFTYQNVERQKGESKWSFKKLFNYGIDGLISFNSKPLRMMIYLGLF HHHHHHHHHCCCCEEEEECCHHHHCCCCHHHHHHHHHHCCCCEEECCCCCHHHHHHHHHH IFSISVLYIIYLFINIMISGVNIPGYFSTIAAILLLGGIQLISIGVVGEYIGRIYYEVKA HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHEEEC RPKYIIQATNLSSIENDEKDTHKVYSK CCEEEEEECCCCCCCCCCHHHHHHCCC >Mature Secondary Structure MKIRVVIPCFNEGEVITQTHQQLTEILSQDSSVKGYDYNMLFIDDGSTDTTIDEMQHLAT CEEEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHH IDRHVSFISFSRNFGKEAAMIAGYQHSTEFDAVIMIDCDLQHPPEYIPKMVEGFMEGYDQ HHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHH VIAKRDRSGENFSRKTLSHLYYKLVNCFVEEVQFDDGVGDFRLLSQRAVKSIASLEEYNR HHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH FSKGLFEWIGYNTKVFTYQNVERQKGESKWSFKKLFNYGIDGLISFNSKPLRMMIYLGLF HHHHHHHHHCCCCEEEEECCHHHHCCCCHHHHHHHHHHCCCCEEECCCCCHHHHHHHHHH IFSISVLYIIYLFINIMISGVNIPGYFSTIAAILLLGGIQLISIGVVGEYIGRIYYEVKA HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHEEEC RPKYIIQATNLSSIENDEKDTHKVYSK CCEEEEEECCCCCCCCCCHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8946165; 9384377 [H]