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The map label for this gene is ygdD [C]

Identifier: 148267043

GI number: 148267043

Start: 673979

End: 674347

Strand: Direct

Name: ygdD [C]

Synonym: SaurJH9_0606

Alternate gene names: 148267043

Gene position: 673979-674347 (Clockwise)

Preceding gene: 148267042

Following gene: 148267044

Centisome position: 23.19

GC content: 33.88

Gene sequence:

>369_bases
ATGAAATTATTTATTATTTTAGGTGCATTAAACGCGATGATGGCTGTCGGAACAGGTGCATTTGGTGCGCATGGTTTACA
AGGAAAAATAAGTGATCACTATTTATCAGTATGGGAAAAAGCAACGACGTATCAAATGTACCATGGCTTAGCATTATTAA
TTATAGGTGTAATTAGTGGTACAACTTCAATCAATGTTAACTGGGCTGGCTGGTTAATATTTGCTGGTATTATTTTCTTT
AGTGGATCATTATATATTTTAGTATTAACTCAAATTAAAGTTTTAGGTGCGATTACGCCAATTGGTGGCGTATTGTTCAT
CATTGGCTGGATAATGTTAATCATTGCGACATTCAAATTTGCTGGTTAA

Upstream 100 bases:

>100_bases
TTGTTAAGTATGTTGGTTAATAATCAAGACGCATATACTTTTATTCGAGTGTTCGGATTTAAACATTTATTAATACTGAA
TTATATAAGGAGAGGTAGCA

Downstream 100 bases:

>100_bases
ATTTTAAAACTTTAGATTACCTATGTAACTAAACATTAAATTTTTAATAAAAATAATCAAGAAAAAGAGTTACAAACTCA
TCTTTTGGGTATAGAATACC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 122; Mature: 122

Protein sequence:

>122_residues
MKLFIILGALNAMMAVGTGAFGAHGLQGKISDHYLSVWEKATTYQMYHGLALLIIGVISGTTSINVNWAGWLIFAGIIFF
SGSLYILVLTQIKVLGAITPIGGVLFIIGWIMLIIATFKFAG

Sequences:

>Translated_122_residues
MKLFIILGALNAMMAVGTGAFGAHGLQGKISDHYLSVWEKATTYQMYHGLALLIIGVISGTTSINVNWAGWLIFAGIIFF
SGSLYILVLTQIKVLGAITPIGGVLFIIGWIMLIIATFKFAG
>Mature_122_residues
MKLFIILGALNAMMAVGTGAFGAHGLQGKISDHYLSVWEKATTYQMYHGLALLIIGVISGTTSINVNWAGWLIFAGIIFF
SGSLYILVLTQIKVLGAITPIGGVLFIIGWIMLIIATFKFAG

Specific function: Unknown

COG id: COG2363

COG function: function code S; Uncharacterized small membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0382 family [H]

Homologues:

Organism=Escherichia coli, GI1789172, Length=119, Percent_Identity=31.0924369747899, Blast_Score=64, Evalue=3e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006696 [H]

Pfam domain/function: PF04241 DUF423 [H]

EC number: NA

Molecular weight: Translated: 13065; Mature: 13065

Theoretical pI: Translated: 9.88; Mature: 9.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLFIILGALNAMMAVGTGAFGAHGLQGKISDHYLSVWEKATTYQMYHGLALLIIGVISG
CEEEEEEHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
TTSINVNWAGWLIFAGIIFFSGSLYILVLTQIKVLGAITPIGGVLFIIGWIMLIIATFKF
CEEEEECHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHC
AG
CC
>Mature Secondary Structure
MKLFIILGALNAMMAVGTGAFGAHGLQGKISDHYLSVWEKATTYQMYHGLALLIIGVISG
CEEEEEEHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
TTSINVNWAGWLIFAGIIFFSGSLYILVLTQIKVLGAITPIGGVLFIIGWIMLIIATFKF
CEEEEECHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHC
AG
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA