| Definition | Staphylococcus aureus subsp. aureus JH9, complete genome. |
|---|---|
| Accession | NC_009487 |
| Length | 2,906,700 |
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The map label for this gene is dck [H]
Identifier: 148267016
GI number: 148267016
Start: 641896
End: 642558
Strand: Reverse
Name: dck [H]
Synonym: SaurJH9_0579
Alternate gene names: 148267016
Gene position: 642558-641896 (Counterclockwise)
Preceding gene: 148267017
Following gene: 148267009
Centisome position: 22.11
GC content: 32.13
Gene sequence:
>663_bases ATGAATAATTACGGTATTCCACAAAATGCCATTATAACCATTGCAGGTACAGTTGGTGTTGGAAAATCAACACTAACGCA AGCACTTGCAGATAAATTAAACTTTAAAACGTCTTTTGAAAATGTCGAACATAATCCATATTTAGATAAATTTTATAGCG ATTTTGAACGATGGAGTTTCCATTTGCAAATTTACTTCTTAGCTGAACGTTTTAAAGAACAAAAGCGTATGTTTGAATAT GGTGGTGGCTTTGTCCAAGATCGATCAATTTATGAAGATGTTGATATTTTTGCAAAAATGCATGAAGAAGAAGGCACAAT GAGTAAAGAAGATTTCAAAACATATTCAGACTTATTTAATGCCATGGTCATGACACCTTATTTTCCTAAACCAGATGTAA TGATTTATTTAGAATGTAACTATGATGAGGTCATTGATCGTATTATTGAACGTGGTCGCGAAATGGAAATTAATACAGAC CCTGAATACTGGAAAAAGCTATTTAAACGCTATGACGATTGGATTAATAGCTTTAATGCATGTCCAGTTGTACGTATCAA TATTAATGAATATGATATCCATAAGGACCCCGAATCTTTAAATCCTATGATAGACAAAATTGCTCGAATTATTCAAACAT ATCGACAAGTAGATACACGATAA
Upstream 100 bases:
>100_bases GTAGTTTTAATCGATACAACTTCTATTGATTTTCTTAAAAATGAACAAGATTACGAAGATATATTACATATTATATTACC TATGATAGGAGATATTACCA
Downstream 100 bases:
>100_bases AAGACTAAAGACATAGCGTATATGTTTATATTCAATGTATATTCCATAGATATCATCGATTACATTATCAATTCTATCGA ATACATTAATTCACATATAC
Product: deoxynucleoside kinase
Products: NA
Alternate protein names: dAK/dCK [H]
Number of amino acids: Translated: 220; Mature: 220
Protein sequence:
>220_residues MNNYGIPQNAIITIAGTVGVGKSTLTQALADKLNFKTSFENVEHNPYLDKFYSDFERWSFHLQIYFLAERFKEQKRMFEY GGGFVQDRSIYEDVDIFAKMHEEEGTMSKEDFKTYSDLFNAMVMTPYFPKPDVMIYLECNYDEVIDRIIERGREMEINTD PEYWKKLFKRYDDWINSFNACPVVRININEYDIHKDPESLNPMIDKIARIIQTYRQVDTR
Sequences:
>Translated_220_residues MNNYGIPQNAIITIAGTVGVGKSTLTQALADKLNFKTSFENVEHNPYLDKFYSDFERWSFHLQIYFLAERFKEQKRMFEY GGGFVQDRSIYEDVDIFAKMHEEEGTMSKEDFKTYSDLFNAMVMTPYFPKPDVMIYLECNYDEVIDRIIERGREMEINTD PEYWKKLFKRYDDWINSFNACPVVRININEYDIHKDPESLNPMIDKIARIIQTYRQVDTR >Mature_220_residues MNNYGIPQNAIITIAGTVGVGKSTLTQALADKLNFKTSFENVEHNPYLDKFYSDFERWSFHLQIYFLAERFKEQKRMFEY GGGFVQDRSIYEDVDIFAKMHEEEGTMSKEDFKTYSDLFNAMVMTPYFPKPDVMIYLECNYDEVIDRIIERGREMEINTD PEYWKKLFKRYDDWINSFNACPVVRININEYDIHKDPESLNPMIDKIARIIQTYRQVDTR
Specific function: Plays an essential role in generating the deoxyribonucleotide precursors dATP AND dCTP for DNA metabolism. The phosphate acceptor specificity is strict toward deoxyadenosine (dAdo) and deoxycytidine (dCyd). The specificity toward the sugar moiety of the n
COG id: COG1428
COG function: function code F; Deoxynucleoside kinases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the DCK/DGK family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002624 [H]
Pfam domain/function: PF01712 dNK [H]
EC number: =2.7.1.74; =2.7.1.76 [H]
Molecular weight: Translated: 26229; Mature: 26229
Theoretical pI: Translated: 4.72; Mature: 4.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNNYGIPQNAIITIAGTVGVGKSTLTQALADKLNFKTSFENVEHNPYLDKFYSDFERWSF CCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHCCHHHHCCCCCCCHHHHHHHHHHHHHH HLQIYFLAERFKEQKRMFEYGGGFVQDRSIYEDVDIFAKMHEEEGTMSKEDFKTYSDLFN HHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH AMVMTPYFPKPDVMIYLECNYDEVIDRIIERGREMEINTDPEYWKKLFKRYDDWINSFNA HHHHCCCCCCCCEEEEEECCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCC CPVVRININEYDIHKDPESLNPMIDKIARIIQTYRQVDTR CCEEEEECCCCCCCCCHHHCCHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MNNYGIPQNAIITIAGTVGVGKSTLTQALADKLNFKTSFENVEHNPYLDKFYSDFERWSF CCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHCCHHHHCCCCCCCHHHHHHHHHHHHHH HLQIYFLAERFKEQKRMFEYGGGFVQDRSIYEDVDIFAKMHEEEGTMSKEDFKTYSDLFN HHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH AMVMTPYFPKPDVMIYLECNYDEVIDRIIERGREMEINTDPEYWKKLFKRYDDWINSFNA HHHHCCCCCCCCEEEEEECCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCC CPVVRININEYDIHKDPESLNPMIDKIARIIQTYRQVDTR CCEEEEECCCCCCCCCHHHCCHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7584024; 9384377 [H]